RNA–Protein interactions for RNA: ENST00000484960.5

SFXN4-207, Transcript of sideroflexin 4, humanhuman

TSL 3

Gene SFXN4, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-207ENST00000484960 AEBP2Q6ZN18 517 aaPredicted RBP34.11■■■■□ 3.05
SFXN4-207ENST00000484960 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
SFXN4-207ENST00000484960 CHIC1Q5VXU3 224 aa33.39■■■□□ 2.94
SFXN4-207ENST00000484960 CCDC180Q9P1Z9 1646 aa30.22■■■□□ 2.43
SFXN4-207ENST00000484960 ABCC9O60706 1549 aa29.51■■■□□ 2.32
SFXN4-207ENST00000484960 PHF23Q9BUL5 403 aaPredicted RBP29.41■■■□□ 2.3
SFXN4-207ENST00000484960 SENP3Q9H4L4 574 aaPredicted RBP28.87■■■□□ 2.21
SFXN4-207ENST00000484960 RB1CC1Q8TDY2 1594 aa28.45■■■□□ 2.15
SFXN4-207ENST00000484960 NACADO15069 1562 aa28.4■■■□□ 2.14
SFXN4-207ENST00000484960 DCAF8L2P0C7V8 631 aa28.3■■■□□ 2.12
SFXN4-207ENST00000484960 MYO15BQ96JP2 1530 aa28.2■■■□□ 2.1
SFXN4-207ENST00000484960 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
SFXN4-207ENST00000484960 DCAF1Q9Y4B6 1507 aa28.04■■■□□ 2.08
SFXN4-207ENST00000484960 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
SFXN4-207ENST00000484960 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
SFXN4-207ENST00000484960 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
SFXN4-207ENST00000484960 SCRIBQ14160 1630 aa27.48■■□□□ 1.99
SFXN4-207ENST00000484960 SHROOM4Q9ULL8 1493 aa27.32■■□□□ 1.96
SFXN4-207ENST00000484960 PLPPR3Q6T4P5 718 aa27.16■■□□□ 1.94
SFXN4-207ENST00000484960 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
SFXN4-207ENST00000484960 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
SFXN4-207ENST00000484960 FOXD1Q16676 465 aa26.83■■□□□ 1.89
SFXN4-207ENST00000484960 CC2D2AQ9P2K1 1620 aa26.75■■□□□ 1.87
SFXN4-207ENST00000484960 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
SFXN4-207ENST00000484960 SMARCA4P51532 1647 aa26.3■■□□□ 1.8
SFXN4-207ENST00000484960 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
SFXN4-207ENST00000484960 SMARCA2P51531 1590 aa26.17■■□□□ 1.78
SFXN4-207ENST00000484960 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
SFXN4-207ENST00000484960 ATAD2BQ9ULI0 1458 aa26.14■■□□□ 1.78
SFXN4-207ENST00000484960 PEG3Q9GZU2 1588 aa26.06■■□□□ 1.76
SFXN4-207ENST00000484960 HMGXB3Q12766 1538 aa26.05■■□□□ 1.76
SFXN4-207ENST00000484960 MROH2BQ7Z745 1585 aa26.04■■□□□ 1.76
SFXN4-207ENST00000484960 BAZ1BQ9UIG0 1483 aaKnown RBP25.96■■□□□ 1.75
SFXN4-207ENST00000484960 ADRA2BP18089 450 aa25.95■■□□□ 1.74
SFXN4-207ENST00000484960 PPP6R1Q9UPN7 881 aa25.94■■□□□ 1.74
SFXN4-207ENST00000484960 WIZO95785 1651 aa25.8■■□□□ 1.72
SFXN4-207ENST00000484960 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
SFXN4-207ENST00000484960 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
SFXN4-207ENST00000484960 LAMC3Q9Y6N6 1575 aa25.53■■□□□ 1.68
SFXN4-207ENST00000484960 ERCC6Q03468 1493 aa25.51■■□□□ 1.67
SFXN4-207ENST00000484960 NESP48681 1621 aa25.51■■□□□ 1.67
SFXN4-207ENST00000484960 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.65
SFXN4-207ENST00000484960 PIAS4Q8N2W9 510 aaPredicted RBP25.36■■□□□ 1.65
SFXN4-207ENST00000484960 PDS5BQ9NTI5 1447 aa25.34■■□□□ 1.65
SFXN4-207ENST00000484960 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
SFXN4-207ENST00000484960 CUX2O14529 1486 aa25.28■■□□□ 1.64
SFXN4-207ENST00000484960 CFTRP13569 1480 aa25.22■■□□□ 1.63
SFXN4-207ENST00000484960 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.62
SFXN4-207ENST00000484960 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
SFXN4-207ENST00000484960 PRDM2Q13029 1718 aa25.16■■□□□ 1.62
SFXN4-207ENST00000484960 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
SFXN4-207ENST00000484960 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
SFXN4-207ENST00000484960 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
SFXN4-207ENST00000484960 SUPT5HO00267 1087 aaKnown RBP25.01■■□□□ 1.59
SFXN4-207ENST00000484960 WDR62O43379 1518 aa24.99■■□□□ 1.59
SFXN4-207ENST00000484960 URB2Q14146 1524 aaKnown RBP24.82■■□□□ 1.56
SFXN4-207ENST00000484960 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
SFXN4-207ENST00000484960 TOPBP1Q92547 1522 aa24.69■■□□□ 1.54
SFXN4-207ENST00000484960 DNMBPQ6XZF7 1577 aa24.68■■□□□ 1.54
SFXN4-207ENST00000484960 MSH5O43196 834 aa24.64■■□□□ 1.54
SFXN4-207ENST00000484960 IFT140Q96RY7 1462 aa24.57■■□□□ 1.52
SFXN4-207ENST00000484960 DNAJC5Q9H3Z4 198 aa24.55■■□□□ 1.52
SFXN4-207ENST00000484960 POLA1P09884 1462 aaPredicted RBP24.46■■□□□ 1.51
SFXN4-207ENST00000484960 CUX1P39880 1505 aa24.45■■□□□ 1.51
SFXN4-207ENST00000484960 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
SFXN4-207ENST00000484960 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
SFXN4-207ENST00000484960 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.5
SFXN4-207ENST00000484960 SOGA1O94964 1423 aa24.37■■□□□ 1.49
SFXN4-207ENST00000484960 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
SFXN4-207ENST00000484960 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
SFXN4-207ENST00000484960 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
SFXN4-207ENST00000484960 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
SFXN4-207ENST00000484960 WRNQ14191 1432 aaPredicted RBP eCLIP24.28■■□□□ 1.48
SFXN4-207ENST00000484960 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
SFXN4-207ENST00000484960 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.47
SFXN4-207ENST00000484960 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
SFXN4-207ENST00000484960 TDRD9Q8NDG6 1382 aaKnown RBP24.21■■□□□ 1.47
SFXN4-207ENST00000484960 OSCARQ8IYS5 282 aa24.21■■□□□ 1.47
SFXN4-207ENST00000484960 ABCA10Q8WWZ4 1543 aa24.16■■□□□ 1.46
SFXN4-207ENST00000484960 CHD1O14646 1710 aa24.12■■□□□ 1.45
SFXN4-207ENST00000484960 PBRM1Q86U86 1689 aa24.11■■□□□ 1.45
SFXN4-207ENST00000484960 GRIN2BQ13224 1484 aa24.11■■□□□ 1.45
SFXN4-207ENST00000484960 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
SFXN4-207ENST00000484960 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
SFXN4-207ENST00000484960 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
SFXN4-207ENST00000484960 SNAPC4Q5SXM2 1469 aa24.06■■□□□ 1.44
SFXN4-207ENST00000484960 FBLN2P98095 1184 aa24.02■■□□□ 1.44
SFXN4-207ENST00000484960 PPP4R3CPQ6ZMV5 832 aa23.99■■□□□ 1.43
SFXN4-207ENST00000484960 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
SFXN4-207ENST00000484960 CHMP7Q8WUX9 453 aaPredicted RBP23.97■■□□□ 1.43
SFXN4-207ENST00000484960 ERICH3Q5RHP9 1530 aa23.91■■□□□ 1.42
SFXN4-207ENST00000484960 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
SFXN4-207ENST00000484960 RIMBP3CA6NJZ7 1639 aa23.82■■□□□ 1.4
SFXN4-207ENST00000484960 RIMBP3BA6NNM3 1639 aa23.82■■□□□ 1.4
SFXN4-207ENST00000484960 RIMBP3Q9UFD9 1639 aa23.82■■□□□ 1.4
SFXN4-207ENST00000484960 FHAD1B1AJZ9 1412 aa23.82■■□□□ 1.4
SFXN4-207ENST00000484960 KIF27Q86VH2 1401 aa23.81■■□□□ 1.4
SFXN4-207ENST00000484960 CLASP1Q7Z460 1538 aa23.79■■□□□ 1.4
SFXN4-207ENST00000484960 GRIN2AQ12879 1464 aa23.79■■□□□ 1.4
SFXN4-207ENST00000484960 ARHGEF11O15085 1522 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms