RNA–Protein interactions for RNA: ENST00000484959.1

NME6-217, Transcript of NME/NM23 nucleoside diphosphate kinase 6, humanhuman

TSL 1 (best)

Gene NME6, Length 1,091 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME6-217ENST00000484959 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
NME6-217ENST00000484959 AEBP2Q6ZN18 517 aaPredicted RBP26.13■■□□□ 1.77
NME6-217ENST00000484959 ABCC9O60706 1549 aa25.96■■□□□ 1.75
NME6-217ENST00000484959 DNAJC5BQ9UF47 199 aa25.31■■□□□ 1.64
NME6-217ENST00000484959 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
NME6-217ENST00000484959 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
NME6-217ENST00000484959 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
NME6-217ENST00000484959 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
NME6-217ENST00000484959 DNAJC5Q9H3Z4 198 aa23.82■■□□□ 1.4
NME6-217ENST00000484959 NACADO15069 1562 aa23.65■■□□□ 1.38
NME6-217ENST00000484959 UNC13AQ9UPW8 1703 aa23.6■■□□□ 1.37
NME6-217ENST00000484959 BICRAQ9NZM4 1560 aa23.54■■□□□ 1.36
NME6-217ENST00000484959 DCAF8L2P0C7V8 631 aa23.51■■□□□ 1.35
NME6-217ENST00000484959 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
NME6-217ENST00000484959 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.32
NME6-217ENST00000484959 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
NME6-217ENST00000484959 MYO15BQ96JP2 1530 aa22.93■■□□□ 1.26
NME6-217ENST00000484959 SHROOM4Q9ULL8 1493 aa22.9■■□□□ 1.26
NME6-217ENST00000484959 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
NME6-217ENST00000484959 CUX2O14529 1486 aa22.62■■□□□ 1.21
NME6-217ENST00000484959 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
NME6-217ENST00000484959 ERCC6Q03468 1493 aa22.41■■□□□ 1.18
NME6-217ENST00000484959 ZCCHC6Q5VYS8 1495 aaKnown RBP22.36■■□□□ 1.17
NME6-217ENST00000484959 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
NME6-217ENST00000484959 SENP3Q9H4L4 574 aaPredicted RBP22.15■■□□□ 1.14
NME6-217ENST00000484959 NESP48681 1621 aa22.05■■□□□ 1.12
NME6-217ENST00000484959 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
NME6-217ENST00000484959 THOC2Q8NI27 1593 aaKnown RBP21.93■■□□□ 1.1
NME6-217ENST00000484959 NCAPD3P42695 1498 aa21.89■■□□□ 1.09
NME6-217ENST00000484959 SMARCA2P51531 1590 aa21.79■■□□□ 1.08
NME6-217ENST00000484959 ATAD2BQ9ULI0 1458 aa21.75■■□□□ 1.07
NME6-217ENST00000484959 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
NME6-217ENST00000484959 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
NME6-217ENST00000484959 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
NME6-217ENST00000484959 LAMC3Q9Y6N6 1575 aa21.52■■□□□ 1.04
NME6-217ENST00000484959 BAZ1BQ9UIG0 1483 aaKnown RBP21.46■■□□□ 1.03
NME6-217ENST00000484959 SMARCA4P51532 1647 aa21.46■■□□□ 1.03
NME6-217ENST00000484959 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
NME6-217ENST00000484959 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
NME6-217ENST00000484959 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.02
NME6-217ENST00000484959 WDR62O43379 1518 aa21.36■■□□□ 1.01
NME6-217ENST00000484959 RIMBP3CA6NJZ7 1639 aa21.35■■□□□ 1.01
NME6-217ENST00000484959 RIMBP3BA6NNM3 1639 aa21.35■■□□□ 1.01
NME6-217ENST00000484959 RIMBP3Q9UFD9 1639 aa21.35■■□□□ 1.01
NME6-217ENST00000484959 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
NME6-217ENST00000484959 TRHP20396 242 aaPredicted RBP21.18■□□□□ 0.98
NME6-217ENST00000484959 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
NME6-217ENST00000484959 PEG3Q9GZU2 1588 aa21.18■□□□□ 0.98
NME6-217ENST00000484959 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
NME6-217ENST00000484959 CEP164Q9UPV0 1460 aa21.09■□□□□ 0.97
NME6-217ENST00000484959 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
NME6-217ENST00000484959 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
NME6-217ENST00000484959 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
NME6-217ENST00000484959 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
NME6-217ENST00000484959 ZNF608Q9ULD9 1512 aaPredicted RBP20.89■□□□□ 0.94
NME6-217ENST00000484959 CFTRP13569 1480 aa20.75■□□□□ 0.91
NME6-217ENST00000484959 WIZO95785 1651 aa20.73■□□□□ 0.91
NME6-217ENST00000484959 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
NME6-217ENST00000484959 CHD1O14646 1710 aa20.67■□□□□ 0.9
NME6-217ENST00000484959 FOXD1Q16676 465 aa20.67■□□□□ 0.9
NME6-217ENST00000484959 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
NME6-217ENST00000484959 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
NME6-217ENST00000484959 FBLN2P98095 1184 aa20.61■□□□□ 0.89
NME6-217ENST00000484959 ILDR1Q86SU0 546 aaPredicted RBP20.61■□□□□ 0.89
NME6-217ENST00000484959 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.88
NME6-217ENST00000484959 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
NME6-217ENST00000484959 CLASP1Q7Z460 1538 aa20.42■□□□□ 0.86
NME6-217ENST00000484959 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
NME6-217ENST00000484959 PRDM2Q13029 1718 aa20.37■□□□□ 0.85
NME6-217ENST00000484959 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.85
NME6-217ENST00000484959 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
NME6-217ENST00000484959 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
NME6-217ENST00000484959 GAPVD1Q14C86 1478 aa20.29■□□□□ 0.84
NME6-217ENST00000484959 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
NME6-217ENST00000484959 RAD54L2Q9Y4B4 1467 aa20.25■□□□□ 0.83
NME6-217ENST00000484959 SYNJ1O43426 1573 aa20.24■□□□□ 0.83
NME6-217ENST00000484959 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
NME6-217ENST00000484959 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
NME6-217ENST00000484959 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
NME6-217ENST00000484959 KDM4FA0A1W2PPD8 638 aa20.18■□□□□ 0.82
NME6-217ENST00000484959 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
NME6-217ENST00000484959 ERCC6L2Q5T890 1561 aa20.15■□□□□ 0.82
NME6-217ENST00000484959 SOGA1O94964 1423 aa20.1■□□□□ 0.81
NME6-217ENST00000484959 MAGI1Q96QZ7 1491 aaPredicted RBP20.08■□□□□ 0.81
NME6-217ENST00000484959 KIF13AQ9H1H9 1805 aa20.07■□□□□ 0.8
NME6-217ENST00000484959 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
NME6-217ENST00000484959 PLPPR3Q6T4P5 718 aa20.04■□□□□ 0.8
NME6-217ENST00000484959 GRIN2BQ13224 1484 aa20.01■□□□□ 0.79
NME6-217ENST00000484959 FGD5Q6ZNL6 1462 aa19.98■□□□□ 0.79
NME6-217ENST00000484959 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
NME6-217ENST00000484959 FAM69CQ0P6D2 419 aa19.9■□□□□ 0.78
NME6-217ENST00000484959 CEP170Q5SW79 1584 aa19.9■□□□□ 0.78
NME6-217ENST00000484959 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
NME6-217ENST00000484959 KDM6BO15054 1643 aa19.84■□□□□ 0.77
NME6-217ENST00000484959 CUX1P39880 1505 aa19.82■□□□□ 0.76
NME6-217ENST00000484959 ABCC10Q5T3U5 1492 aa19.82■□□□□ 0.76
NME6-217ENST00000484959 HECW2Q9P2P5 1572 aa19.81■□□□□ 0.76
NME6-217ENST00000484959 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
NME6-217ENST00000484959 DIP2BQ9P265 1576 aa19.77■□□□□ 0.76
NME6-217ENST00000484959 ADGRL1O94910 1474 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 516.8 ms