RNA–Protein interactions for RNA: ENST00000484908.1

ATP6AP1-208, Transcript of ATPase H+ transporting accessory protein 1, humanhuman

TSL 2

Gene ATP6AP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1-208ENST00000484908 NISCHQ9Y2I1 1504 aa44.76■■■■■ 4.76
ATP6AP1-208ENST00000484908 CCDC180Q9P1Z9 1646 aa40.16■■■■■ 4.02
ATP6AP1-208ENST00000484908 ABCC9O60706 1549 aa39.93■■■■□ 3.98
ATP6AP1-208ENST00000484908 RB1CC1Q8TDY2 1594 aa38.13■■■■□ 3.69
ATP6AP1-208ENST00000484908 NACADO15069 1562 aa37.91■■■■□ 3.66
ATP6AP1-208ENST00000484908 DCAF8L2P0C7V8 631 aa37.67■■■■□ 3.62
ATP6AP1-208ENST00000484908 MYO15BQ96JP2 1530 aa37.46■■■■□ 3.59
ATP6AP1-208ENST00000484908 DNAJC5BQ9UF47 199 aa37.29■■■■□ 3.56
ATP6AP1-208ENST00000484908 UNC13AQ9UPW8 1703 aa37.28■■■■□ 3.56
ATP6AP1-208ENST00000484908 PABPN1Q86U42 306 aaKnown RBP eCLIP37.18■■■■□ 3.54
ATP6AP1-208ENST00000484908 ZCCHC6Q5VYS8 1495 aaKnown RBP37.13■■■■□ 3.54
ATP6AP1-208ENST00000484908 DCAF1Q9Y4B6 1507 aa37.03■■■■□ 3.52
ATP6AP1-208ENST00000484908 BICRAQ9NZM4 1560 aa36.99■■■■□ 3.51
ATP6AP1-208ENST00000484908 SHROOM4Q9ULL8 1493 aa36.56■■■■□ 3.44
ATP6AP1-208ENST00000484908 SCRIBQ14160 1630 aa36.54■■■■□ 3.44
ATP6AP1-208ENST00000484908 CC2D2AQ9P2K1 1620 aa36.11■■■■□ 3.37
ATP6AP1-208ENST00000484908 EIF4G1Q04637 1599 aaKnown RBP36.07■■■■□ 3.37
ATP6AP1-208ENST00000484908 CECR2Q9BXF3 1484 aa35.98■■■■□ 3.35
ATP6AP1-208ENST00000484908 NCAPD3P42695 1498 aa34.97■■■■□ 3.19
ATP6AP1-208ENST00000484908 SMARCA4P51532 1647 aa34.9■■■■□ 3.18
ATP6AP1-208ENST00000484908 ATAD2BQ9ULI0 1458 aa34.88■■■■□ 3.17
ATP6AP1-208ENST00000484908 SMARCA2P51531 1590 aa34.82■■■■□ 3.16
ATP6AP1-208ENST00000484908 BAZ1AQ9NRL2 1556 aaPredicted RBP34.76■■■■□ 3.16
ATP6AP1-208ENST00000484908 HMGXB3Q12766 1538 aa34.75■■■■□ 3.15
ATP6AP1-208ENST00000484908 PEG3Q9GZU2 1588 aa34.57■■■■□ 3.13
ATP6AP1-208ENST00000484908 BAZ1BQ9UIG0 1483 aaKnown RBP34.55■■■■□ 3.12
ATP6AP1-208ENST00000484908 ERCC6Q03468 1493 aa34.48■■■■□ 3.11
ATP6AP1-208ENST00000484908 MROH2BQ7Z745 1585 aa34.47■■■■□ 3.11
ATP6AP1-208ENST00000484908 CUX2O14529 1486 aa34.39■■■■□ 3.1
ATP6AP1-208ENST00000484908 NESP48681 1621 aa34.34■■■■□ 3.09
ATP6AP1-208ENST00000484908 LAMC3Q9Y6N6 1575 aa34.19■■■■□ 3.06
ATP6AP1-208ENST00000484908 DNAJC5Q9H3Z4 198 aa34.18■■■■□ 3.06
ATP6AP1-208ENST00000484908 WIZO95785 1651 aa34.09■■■■□ 3.05
ATP6AP1-208ENST00000484908 THOC2Q8NI27 1593 aaKnown RBP34■■■■□ 3.03
ATP6AP1-208ENST00000484908 PDS5BQ9NTI5 1447 aa33.97■■■■□ 3.03
ATP6AP1-208ENST00000484908 KIF21AQ7Z4S6 1674 aa33.95■■■■□ 3.03
ATP6AP1-208ENST00000484908 CADPSQ9ULU8 1353 aa33.92■■■■□ 3.02
ATP6AP1-208ENST00000484908 RSF1Q96T23 1441 aaPredicted RBP33.81■■■■□ 3
ATP6AP1-208ENST00000484908 TOP2AP11388 1531 aaKnown RBP33.68■■■□□ 2.98
ATP6AP1-208ENST00000484908 MRC2Q9UBG0 1479 aa33.65■■■□□ 2.98
ATP6AP1-208ENST00000484908 WDR62O43379 1518 aa33.58■■■□□ 2.97
ATP6AP1-208ENST00000484908 CFTRP13569 1480 aa33.56■■■□□ 2.96
ATP6AP1-208ENST00000484908 CEP164Q9UPV0 1460 aa33.55■■■□□ 2.96
ATP6AP1-208ENST00000484908 FANCD2Q9BXW9 1451 aa33.52■■■□□ 2.96
ATP6AP1-208ENST00000484908 PRDM2Q13029 1718 aa33.3■■■□□ 2.92
ATP6AP1-208ENST00000484908 CCDC88BA6NC98 1476 aa33.27■■■□□ 2.92
ATP6AP1-208ENST00000484908 URB2Q14146 1524 aaKnown RBP33.23■■■□□ 2.91
ATP6AP1-208ENST00000484908 TOPBP1Q92547 1522 aa32.91■■■□□ 2.86
ATP6AP1-208ENST00000484908 IFT140Q96RY7 1462 aa32.89■■■□□ 2.86
ATP6AP1-208ENST00000484908 ABCC8Q09428 1581 aa32.88■■■□□ 2.85
ATP6AP1-208ENST00000484908 OSCARQ8IYS5 282 aa32.84■■■□□ 2.85
ATP6AP1-208ENST00000484908 DNMBPQ6XZF7 1577 aa32.82■■■□□ 2.84
ATP6AP1-208ENST00000484908 ZNF608Q9ULD9 1512 aaPredicted RBP32.78■■■□□ 2.84
ATP6AP1-208ENST00000484908 TRIM41Q8WV44 630 aa32.71■■■□□ 2.83
ATP6AP1-208ENST00000484908 EIF4G3O43432 1585 aaKnown RBP32.64■■■□□ 2.82
ATP6AP1-208ENST00000484908 TARBP1Q13395 1621 aaKnown RBP32.62■■■□□ 2.81
ATP6AP1-208ENST00000484908 POLA1P09884 1462 aaPredicted RBP32.58■■■□□ 2.81
ATP6AP1-208ENST00000484908 AQRO60306 1485 aaKnown RBP eCLIP32.5■■■□□ 2.793e-7■■■■■ 29.4
ATP6AP1-208ENST00000484908 RAD54L2Q9Y4B4 1467 aa32.44■■■□□ 2.78
ATP6AP1-208ENST00000484908 SOGA1O94964 1423 aa32.43■■■□□ 2.78
ATP6AP1-208ENST00000484908 SUPT5HO00267 1087 aaKnown RBP32.4■■■□□ 2.78
ATP6AP1-208ENST00000484908 FGD5Q6ZNL6 1462 aa32.4■■■□□ 2.78
ATP6AP1-208ENST00000484908 RIMBP3CA6NJZ7 1639 aa32.4■■■□□ 2.78
ATP6AP1-208ENST00000484908 RIMBP3BA6NNM3 1639 aa32.4■■■□□ 2.78
ATP6AP1-208ENST00000484908 RIMBP3Q9UFD9 1639 aa32.4■■■□□ 2.78
ATP6AP1-208ENST00000484908 CHD1O14646 1710 aa32.38■■■□□ 2.77
ATP6AP1-208ENST00000484908 CUX1P39880 1505 aa32.38■■■□□ 2.77
ATP6AP1-208ENST00000484908 WDR97A6NE52 1622 aa32.34■■■□□ 2.77
ATP6AP1-208ENST00000484908 TDRD9Q8NDG6 1382 aaKnown RBP32.32■■■□□ 2.77
ATP6AP1-208ENST00000484908 ARHGEF11O15085 1522 aa32.31■■■□□ 2.76
ATP6AP1-208ENST00000484908 FBLN2P98095 1184 aa32.25■■■□□ 2.75
ATP6AP1-208ENST00000484908 SNAPC4Q5SXM2 1469 aa32.19■■■□□ 2.74
ATP6AP1-208ENST00000484908 GRIN2BQ13224 1484 aa32.15■■■□□ 2.74
ATP6AP1-208ENST00000484908 MAGI1Q96QZ7 1491 aaPredicted RBP32.14■■■□□ 2.74
ATP6AP1-208ENST00000484908 CHMP7Q8WUX9 453 aaPredicted RBP32.07■■■□□ 2.72
ATP6AP1-208ENST00000484908 ABCA10Q8WWZ4 1543 aa32.05■■■□□ 2.72
ATP6AP1-208ENST00000484908 PBRM1Q86U86 1689 aa32.05■■■□□ 2.72
ATP6AP1-208ENST00000484908 GAPVD1Q14C86 1478 aa32.05■■■□□ 2.72
ATP6AP1-208ENST00000484908 CYB5RLQ6IPT4 315 aa32.03■■■□□ 2.72
ATP6AP1-208ENST00000484908 SYNJ2O15056 1496 aa32.03■■■□□ 2.72
ATP6AP1-208ENST00000484908 SYNJ1O43426 1573 aa32.02■■■□□ 2.72
ATP6AP1-208ENST00000484908 CLASP1Q7Z460 1538 aa32■■■□□ 2.71
ATP6AP1-208ENST00000484908 ABCA5Q8WWZ7 1642 aa32■■■□□ 2.71
ATP6AP1-208ENST00000484908 ARAP1Q96P48 1450 aa31.99■■■□□ 2.71
ATP6AP1-208ENST00000484908 BIVM-ERCC5R4GMW8 1640 aa31.95■■■□□ 2.71
ATP6AP1-208ENST00000484908 WRNQ14191 1432 aaPredicted RBP eCLIP31.94■■■□□ 2.7
ATP6AP1-208ENST00000484908 TOP2BQ02880 1626 aa31.94■■■□□ 2.7
ATP6AP1-208ENST00000484908 ADAMTS12P58397 1594 aa31.74■■■□□ 2.67
ATP6AP1-208ENST00000484908 GRIN2AQ12879 1464 aa31.72■■■□□ 2.67
ATP6AP1-208ENST00000484908 ERICH3Q5RHP9 1530 aa31.67■■■□□ 2.66
ATP6AP1-208ENST00000484908 FHAD1B1AJZ9 1412 aa31.66■■■□□ 2.66
ATP6AP1-208ENST00000484908 TRHP20396 242 aaPredicted RBP31.63■■■□□ 2.65
ATP6AP1-208ENST00000484908 NUP160Q12769 1436 aa31.62■■■□□ 2.65
ATP6AP1-208ENST00000484908 CEP170Q5SW79 1584 aa31.6■■■□□ 2.65
ATP6AP1-208ENST00000484908 ERCC6L2Q5T890 1561 aa31.48■■■□□ 2.63
ATP6AP1-208ENST00000484908 SHROOM2Q13796 1616 aa31.48■■■□□ 2.63
ATP6AP1-208ENST00000484908 KIF27Q86VH2 1401 aa31.31■■■□□ 2.6
ATP6AP1-208ENST00000484908 JPH4Q96JJ6 628 aa31.29■■■□□ 2.6
ATP6AP1-208ENST00000484908 PRG4Q92954 1404 aaPredicted RBP31.29■■■□□ 2.6
ATP6AP1-208ENST00000484908 RUSC2Q8N2Y8 1516 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms