RNA–Protein interactions for RNA: ENST00000484895.5

LSP1-215, Transcript of lymphocyte specific protein 1, humanhuman

TSL 5

Gene LSP1, Length 436 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-215ENST00000484895 NISCHQ9Y2I1 1504 aa36.17■■■■□ 3.38
LSP1-215ENST00000484895 ABCC9O60706 1549 aa32.82■■■□□ 2.85
LSP1-215ENST00000484895 CCDC180Q9P1Z9 1646 aa32.54■■■□□ 2.8
LSP1-215ENST00000484895 RB1CC1Q8TDY2 1594 aa31.07■■■□□ 2.56
LSP1-215ENST00000484895 DCAF8L2P0C7V8 631 aa30.83■■■□□ 2.53
LSP1-215ENST00000484895 DNAJC5BQ9UF47 199 aa30.78■■■□□ 2.52
LSP1-215ENST00000484895 NACADO15069 1562 aa30.75■■■□□ 2.51
LSP1-215ENST00000484895 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
LSP1-215ENST00000484895 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
LSP1-215ENST00000484895 MYO15BQ96JP2 1530 aa30.14■■■□□ 2.42
LSP1-215ENST00000484895 BICRAQ9NZM4 1560 aa30.14■■■□□ 2.42
LSP1-215ENST00000484895 ZCCHC6Q5VYS8 1495 aaKnown RBP29.96■■■□□ 2.39
LSP1-215ENST00000484895 SCRIBQ14160 1630 aa29.83■■■□□ 2.37
LSP1-215ENST00000484895 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
LSP1-215ENST00000484895 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
LSP1-215ENST00000484895 CC2D2AQ9P2K1 1620 aa29.58■■■□□ 2.33
LSP1-215ENST00000484895 CECR2Q9BXF3 1484 aa29.51■■■□□ 2.31
LSP1-215ENST00000484895 EIF4G1Q04637 1599 aaKnown RBP29.46■■■□□ 2.31
LSP1-215ENST00000484895 ERCC6Q03468 1493 aa28.37■■■□□ 2.13
LSP1-215ENST00000484895 NCAPD3P42695 1498 aa28.34■■■□□ 2.13
LSP1-215ENST00000484895 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
LSP1-215ENST00000484895 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
LSP1-215ENST00000484895 ATAD2BQ9ULI0 1458 aa28.31■■■□□ 2.12
LSP1-215ENST00000484895 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
LSP1-215ENST00000484895 CUX2O14529 1486 aa28.2■■■□□ 2.1
LSP1-215ENST00000484895 HMGXB3Q12766 1538 aa28.18■■■□□ 2.1
LSP1-215ENST00000484895 NESP48681 1621 aa28.14■■■□□ 2.09
LSP1-215ENST00000484895 BAZ1BQ9UIG0 1483 aaKnown RBP28.12■■■□□ 2.09
LSP1-215ENST00000484895 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
LSP1-215ENST00000484895 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
LSP1-215ENST00000484895 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
LSP1-215ENST00000484895 THOC2Q8NI27 1593 aaKnown RBP27.83■■■□□ 2.05
LSP1-215ENST00000484895 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
LSP1-215ENST00000484895 KIF21AQ7Z4S6 1674 aa27.81■■■□□ 2.04
LSP1-215ENST00000484895 WIZO95785 1651 aa27.66■■■□□ 2.02
LSP1-215ENST00000484895 PDS5BQ9NTI5 1447 aa27.66■■■□□ 2.02
LSP1-215ENST00000484895 CADPSQ9ULU8 1353 aa27.52■■■□□ 2
LSP1-215ENST00000484895 MRC2Q9UBG0 1479 aa27.47■■□□□ 1.99
LSP1-215ENST00000484895 WDR62O43379 1518 aa27.37■■□□□ 1.97
LSP1-215ENST00000484895 CEP164Q9UPV0 1460 aa27.37■■□□□ 1.97
LSP1-215ENST00000484895 FANCD2Q9BXW9 1451 aa27.3■■□□□ 1.96
LSP1-215ENST00000484895 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
LSP1-215ENST00000484895 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
LSP1-215ENST00000484895 TOP2AP11388 1531 aaKnown RBP27.23■■□□□ 1.95
LSP1-215ENST00000484895 CFTRP13569 1480 aa27.17■■□□□ 1.94
LSP1-215ENST00000484895 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
LSP1-215ENST00000484895 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
LSP1-215ENST00000484895 CCDC88BA6NC98 1476 aa26.9■■□□□ 1.9
LSP1-215ENST00000484895 OSCARQ8IYS5 282 aa26.9■■□□□ 1.9
LSP1-215ENST00000484895 ZNF608Q9ULD9 1512 aaPredicted RBP26.8■■□□□ 1.88
LSP1-215ENST00000484895 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
LSP1-215ENST00000484895 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
LSP1-215ENST00000484895 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
LSP1-215ENST00000484895 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
LSP1-215ENST00000484895 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
LSP1-215ENST00000484895 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
LSP1-215ENST00000484895 DNMBPQ6XZF7 1577 aa26.65■■□□□ 1.86
LSP1-215ENST00000484895 ABCC8Q09428 1581 aa26.59■■□□□ 1.85
LSP1-215ENST00000484895 CHD1O14646 1710 aa26.55■■□□□ 1.84
LSP1-215ENST00000484895 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
LSP1-215ENST00000484895 AQRO60306 1485 aaKnown RBP eCLIP26.53■■□□□ 1.84
LSP1-215ENST00000484895 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
LSP1-215ENST00000484895 FBLN2P98095 1184 aa26.5■■□□□ 1.83
LSP1-215ENST00000484895 POLA1P09884 1462 aaPredicted RBP26.48■■□□□ 1.83
LSP1-215ENST00000484895 RAD54L2Q9Y4B4 1467 aa26.43■■□□□ 1.82
LSP1-215ENST00000484895 CYB5RLQ6IPT4 315 aa26.38■■□□□ 1.81
LSP1-215ENST00000484895 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
LSP1-215ENST00000484895 SOGA1O94964 1423 aa26.34■■□□□ 1.81
LSP1-215ENST00000484895 FGD5Q6ZNL6 1462 aa26.33■■□□□ 1.81
LSP1-215ENST00000484895 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
LSP1-215ENST00000484895 SUPT5HO00267 1087 aaKnown RBP26.29■■□□□ 1.8
LSP1-215ENST00000484895 ARAP1Q96P48 1450 aa26.27■■□□□ 1.8
LSP1-215ENST00000484895 CUX1P39880 1505 aa26.26■■□□□ 1.79
LSP1-215ENST00000484895 TRHP20396 242 aaPredicted RBP26.23■■□□□ 1.79
LSP1-215ENST00000484895 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
LSP1-215ENST00000484895 WDR97A6NE52 1622 aa26.15■■□□□ 1.78
LSP1-215ENST00000484895 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
LSP1-215ENST00000484895 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
LSP1-215ENST00000484895 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
LSP1-215ENST00000484895 MAGI1Q96QZ7 1491 aaPredicted RBP26.12■■□□□ 1.77
LSP1-215ENST00000484895 CLASP1Q7Z460 1538 aa26.11■■□□□ 1.77
LSP1-215ENST00000484895 SYNJ2O15056 1496 aa26.05■■□□□ 1.76
LSP1-215ENST00000484895 GAPVD1Q14C86 1478 aa26.03■■□□□ 1.76
LSP1-215ENST00000484895 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
LSP1-215ENST00000484895 ABCA10Q8WWZ4 1543 aa25.93■■□□□ 1.74
LSP1-215ENST00000484895 WRNQ14191 1432 aaPredicted RBP eCLIP25.83■■□□□ 1.73
LSP1-215ENST00000484895 ADAMTS12P58397 1594 aa25.82■■□□□ 1.72
LSP1-215ENST00000484895 GRIN2AQ12879 1464 aa25.81■■□□□ 1.72
LSP1-215ENST00000484895 ERCC6L2Q5T890 1561 aa25.79■■□□□ 1.72
LSP1-215ENST00000484895 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
LSP1-215ENST00000484895 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
LSP1-215ENST00000484895 CEP170Q5SW79 1584 aa25.76■■□□□ 1.71
LSP1-215ENST00000484895 FHAD1B1AJZ9 1412 aa25.66■■□□□ 1.7
LSP1-215ENST00000484895 NUP160Q12769 1436 aa25.65■■□□□ 1.7
LSP1-215ENST00000484895 ERICH3Q5RHP9 1530 aa25.61■■□□□ 1.69
LSP1-215ENST00000484895 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
LSP1-215ENST00000484895 AEBP2Q6ZN18 517 aaPredicted RBP25.56■■□□□ 1.68
LSP1-215ENST00000484895 PRG4Q92954 1404 aaPredicted RBP25.51■■□□□ 1.67
LSP1-215ENST00000484895 RUSC2Q8N2Y8 1516 aa25.46■■□□□ 1.67
LSP1-215ENST00000484895 JPH4Q96JJ6 628 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms