RNA–Protein interactions for RNA: ENST00000484792.5

PDZD4-208, Transcript of PDZ domain containing 4, humanhuman

TSL 3

Gene PDZD4, Length 777 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-208ENST00000484792 NISCHQ9Y2I1 1504 aa34.96■■■■□ 3.19
PDZD4-208ENST00000484792 CCDC180Q9P1Z9 1646 aa31.16■■■□□ 2.58
PDZD4-208ENST00000484792 ABCC9O60706 1549 aa30.85■■■□□ 2.53
PDZD4-208ENST00000484792 RB1CC1Q8TDY2 1594 aa29.49■■■□□ 2.31
PDZD4-208ENST00000484792 NACADO15069 1562 aa29.38■■■□□ 2.29
PDZD4-208ENST00000484792 DCAF8L2P0C7V8 631 aa29.34■■■□□ 2.29
PDZD4-208ENST00000484792 MYO15BQ96JP2 1530 aa29.1■■■□□ 2.25
PDZD4-208ENST00000484792 ZCCHC6Q5VYS8 1495 aaKnown RBP29.06■■■□□ 2.24
PDZD4-208ENST00000484792 DCAF1Q9Y4B6 1507 aa28.88■■■□□ 2.21
PDZD4-208ENST00000484792 UNC13AQ9UPW8 1703 aa28.8■■■□□ 2.2
PDZD4-208ENST00000484792 PABPN1Q86U42 306 aaKnown RBP eCLIP28.79■■■□□ 2.2
PDZD4-208ENST00000484792 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
PDZD4-208ENST00000484792 DNAJC5BQ9UF47 199 aa28.62■■■□□ 2.17
PDZD4-208ENST00000484792 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
PDZD4-208ENST00000484792 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
PDZD4-208ENST00000484792 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
PDZD4-208ENST00000484792 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
PDZD4-208ENST00000484792 CECR2Q9BXF3 1484 aa27.74■■■□□ 2.03
PDZD4-208ENST00000484792 SMARCA4P51532 1647 aa27.18■■□□□ 1.94
PDZD4-208ENST00000484792 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
PDZD4-208ENST00000484792 ATAD2BQ9ULI0 1458 aa27.13■■□□□ 1.93
PDZD4-208ENST00000484792 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
PDZD4-208ENST00000484792 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
PDZD4-208ENST00000484792 HMGXB3Q12766 1538 aa26.97■■□□□ 1.91
PDZD4-208ENST00000484792 MROH2BQ7Z745 1585 aa26.96■■□□□ 1.91
PDZD4-208ENST00000484792 PEG3Q9GZU2 1588 aa26.9■■□□□ 1.9
PDZD4-208ENST00000484792 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
PDZD4-208ENST00000484792 WIZO95785 1651 aa26.63■■□□□ 1.85
PDZD4-208ENST00000484792 NESP48681 1621 aa26.61■■□□□ 1.85
PDZD4-208ENST00000484792 ERCC6Q03468 1493 aa26.59■■□□□ 1.85
PDZD4-208ENST00000484792 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
PDZD4-208ENST00000484792 LAMC3Q9Y6N6 1575 aa26.45■■□□□ 1.82
PDZD4-208ENST00000484792 CUX2O14529 1486 aa26.4■■□□□ 1.82
PDZD4-208ENST00000484792 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.81
PDZD4-208ENST00000484792 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.81
PDZD4-208ENST00000484792 PDS5BQ9NTI5 1447 aa26.29■■□□□ 1.8
PDZD4-208ENST00000484792 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
PDZD4-208ENST00000484792 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
PDZD4-208ENST00000484792 CFTRP13569 1480 aa26.12■■□□□ 1.77
PDZD4-208ENST00000484792 MRC2Q9UBG0 1479 aa26.06■■□□□ 1.76
PDZD4-208ENST00000484792 FANCD2Q9BXW9 1451 aa26.04■■□□□ 1.76
PDZD4-208ENST00000484792 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
PDZD4-208ENST00000484792 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
PDZD4-208ENST00000484792 WDR62O43379 1518 aa25.98■■□□□ 1.75
PDZD4-208ENST00000484792 DNAJC5Q9H3Z4 198 aa25.96■■□□□ 1.75
PDZD4-208ENST00000484792 PRDM2Q13029 1718 aa25.83■■□□□ 1.73
PDZD4-208ENST00000484792 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
PDZD4-208ENST00000484792 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
PDZD4-208ENST00000484792 TOPBP1Q92547 1522 aa25.6■■□□□ 1.69
PDZD4-208ENST00000484792 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
PDZD4-208ENST00000484792 DNMBPQ6XZF7 1577 aa25.52■■□□□ 1.68
PDZD4-208ENST00000484792 IFT140Q96RY7 1462 aa25.49■■□□□ 1.67
PDZD4-208ENST00000484792 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
PDZD4-208ENST00000484792 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
PDZD4-208ENST00000484792 TARBP1Q13395 1621 aaKnown RBP25.33■■□□□ 1.65
PDZD4-208ENST00000484792 CUX1P39880 1505 aa25.31■■□□□ 1.64
PDZD4-208ENST00000484792 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
PDZD4-208ENST00000484792 RAD54L2Q9Y4B4 1467 aa25.27■■□□□ 1.64
PDZD4-208ENST00000484792 FGD5Q6ZNL6 1462 aa25.26■■□□□ 1.63
PDZD4-208ENST00000484792 OSCARQ8IYS5 282 aa25.25■■□□□ 1.63
PDZD4-208ENST00000484792 AQRO60306 1485 aaKnown RBP eCLIP25.25■■□□□ 1.63
PDZD4-208ENST00000484792 SOGA1O94964 1423 aa25.24■■□□□ 1.63
PDZD4-208ENST00000484792 TDRD9Q8NDG6 1382 aaKnown RBP25.17■■□□□ 1.62
PDZD4-208ENST00000484792 WDR97A6NE52 1622 aa25.06■■□□□ 1.6
PDZD4-208ENST00000484792 CHD1O14646 1710 aa25.02■■□□□ 1.6
PDZD4-208ENST00000484792 WRNQ14191 1432 aaPredicted RBP eCLIP25.02■■□□□ 1.6
PDZD4-208ENST00000484792 SNAPC4Q5SXM2 1469 aa25.01■■□□□ 1.59
PDZD4-208ENST00000484792 FBLN2P98095 1184 aa25■■□□□ 1.59
PDZD4-208ENST00000484792 TRIM41Q8WV44 630 aa25■■□□□ 1.59
PDZD4-208ENST00000484792 ABCA10Q8WWZ4 1543 aa24.99■■□□□ 1.59
PDZD4-208ENST00000484792 SYNJ1O43426 1573 aa24.98■■□□□ 1.59
PDZD4-208ENST00000484792 GRIN2BQ13224 1484 aa24.98■■□□□ 1.59
PDZD4-208ENST00000484792 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
PDZD4-208ENST00000484792 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
PDZD4-208ENST00000484792 GAPVD1Q14C86 1478 aa24.95■■□□□ 1.58
PDZD4-208ENST00000484792 MAGI1Q96QZ7 1491 aaPredicted RBP24.94■■□□□ 1.58
PDZD4-208ENST00000484792 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
PDZD4-208ENST00000484792 RIMBP3CA6NJZ7 1639 aa24.9■■□□□ 1.58
PDZD4-208ENST00000484792 RIMBP3BA6NNM3 1639 aa24.9■■□□□ 1.58
PDZD4-208ENST00000484792 RIMBP3Q9UFD9 1639 aa24.9■■□□□ 1.58
PDZD4-208ENST00000484792 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
PDZD4-208ENST00000484792 ARHGEF11O15085 1522 aa24.87■■□□□ 1.57
PDZD4-208ENST00000484792 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
PDZD4-208ENST00000484792 SYNJ2O15056 1496 aa24.85■■□□□ 1.57
PDZD4-208ENST00000484792 CLASP1Q7Z460 1538 aa24.76■■□□□ 1.55
PDZD4-208ENST00000484792 ADAMTS12P58397 1594 aa24.7■■□□□ 1.54
PDZD4-208ENST00000484792 ARAP1Q96P48 1450 aa24.67■■□□□ 1.54
PDZD4-208ENST00000484792 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
PDZD4-208ENST00000484792 GRIN2AQ12879 1464 aa24.66■■□□□ 1.54
PDZD4-208ENST00000484792 CYB5RLQ6IPT4 315 aa24.66■■□□□ 1.54
PDZD4-208ENST00000484792 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.54
PDZD4-208ENST00000484792 NUP160Q12769 1436 aa24.57■■□□□ 1.52
PDZD4-208ENST00000484792 CEP170Q5SW79 1584 aa24.56■■□□□ 1.52
PDZD4-208ENST00000484792 KIF27Q86VH2 1401 aa24.51■■□□□ 1.51
PDZD4-208ENST00000484792 IGF1RP08069 1367 aa24.46■■□□□ 1.51
PDZD4-208ENST00000484792 ERCC6L2Q5T890 1561 aa24.43■■□□□ 1.5
PDZD4-208ENST00000484792 SHROOM2Q13796 1616 aa24.39■■□□□ 1.5
PDZD4-208ENST00000484792 CUL7Q14999 1698 aa24.37■■□□□ 1.49
PDZD4-208ENST00000484792 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
PDZD4-208ENST00000484792 JPH4Q96JJ6 628 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms