RNA–Protein interactions for RNA: ENST00000484762.1

CSF3R-211, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 2

Gene CSF3R, Length 677 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-211ENST00000484762 NISCHQ9Y2I1 1504 aa32.24■■■□□ 2.75
CSF3R-211ENST00000484762 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
CSF3R-211ENST00000484762 ABCC9O60706 1549 aa28.55■■■□□ 2.16
CSF3R-211ENST00000484762 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
CSF3R-211ENST00000484762 NACADO15069 1562 aa27.25■■□□□ 1.95
CSF3R-211ENST00000484762 MYO15BQ96JP2 1530 aa27.01■■□□□ 1.91
CSF3R-211ENST00000484762 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
CSF3R-211ENST00000484762 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
CSF3R-211ENST00000484762 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
CSF3R-211ENST00000484762 DCAF1Q9Y4B6 1507 aa26.73■■□□□ 1.87
CSF3R-211ENST00000484762 DNAJC5BQ9UF47 199 aa26.61■■□□□ 1.85
CSF3R-211ENST00000484762 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
CSF3R-211ENST00000484762 PABPN1Q86U42 306 aaKnown RBP eCLIP26.56■■□□□ 1.84
CSF3R-211ENST00000484762 SHROOM4Q9ULL8 1493 aa26.31■■□□□ 1.8
CSF3R-211ENST00000484762 SCRIBQ14160 1630 aa26.24■■□□□ 1.79
CSF3R-211ENST00000484762 EIF4G1Q04637 1599 aaKnown RBP25.88■■□□□ 1.73
CSF3R-211ENST00000484762 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
CSF3R-211ENST00000484762 CECR2Q9BXF3 1484 aa25.74■■□□□ 1.71
CSF3R-211ENST00000484762 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
CSF3R-211ENST00000484762 SMARCA4P51532 1647 aa25.12■■□□□ 1.61
CSF3R-211ENST00000484762 ATAD2BQ9ULI0 1458 aa25.08■■□□□ 1.6
CSF3R-211ENST00000484762 SMARCA2P51531 1590 aa25.03■■□□□ 1.6
CSF3R-211ENST00000484762 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
CSF3R-211ENST00000484762 HMGXB3Q12766 1538 aa25■■□□□ 1.59
CSF3R-211ENST00000484762 PEG3Q9GZU2 1588 aa24.94■■□□□ 1.58
CSF3R-211ENST00000484762 MROH2BQ7Z745 1585 aa24.81■■□□□ 1.56
CSF3R-211ENST00000484762 BAZ1BQ9UIG0 1483 aaKnown RBP24.81■■□□□ 1.56
CSF3R-211ENST00000484762 ERCC6Q03468 1493 aa24.64■■□□□ 1.53
CSF3R-211ENST00000484762 CUX2O14529 1486 aa24.62■■□□□ 1.53
CSF3R-211ENST00000484762 NESP48681 1621 aa24.61■■□□□ 1.53
CSF3R-211ENST00000484762 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
CSF3R-211ENST00000484762 WIZO95785 1651 aa24.53■■□□□ 1.52
CSF3R-211ENST00000484762 THOC2Q8NI27 1593 aaKnown RBP24.4■■□□□ 1.5
CSF3R-211ENST00000484762 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
CSF3R-211ENST00000484762 KIF21AQ7Z4S6 1674 aa24.36■■□□□ 1.49
CSF3R-211ENST00000484762 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
CSF3R-211ENST00000484762 CADPSQ9ULU8 1353 aa24.35■■□□□ 1.49
CSF3R-211ENST00000484762 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
CSF3R-211ENST00000484762 TOP2AP11388 1531 aaKnown RBP24.26■■□□□ 1.47
CSF3R-211ENST00000484762 CFTRP13569 1480 aa24.14■■□□□ 1.46
CSF3R-211ENST00000484762 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
CSF3R-211ENST00000484762 WDR62O43379 1518 aa24.11■■□□□ 1.45
CSF3R-211ENST00000484762 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
CSF3R-211ENST00000484762 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
CSF3R-211ENST00000484762 PRDM2Q13029 1718 aa24■■□□□ 1.43
CSF3R-211ENST00000484762 CCDC88BA6NC98 1476 aa23.95■■□□□ 1.42
CSF3R-211ENST00000484762 URB2Q14146 1524 aaKnown RBP23.86■■□□□ 1.41
CSF3R-211ENST00000484762 TOPBP1Q92547 1522 aa23.64■■□□□ 1.38
CSF3R-211ENST00000484762 ABCC8Q09428 1581 aa23.63■■□□□ 1.37
CSF3R-211ENST00000484762 IFT140Q96RY7 1462 aa23.6■■□□□ 1.37
CSF3R-211ENST00000484762 DNMBPQ6XZF7 1577 aa23.6■■□□□ 1.37
CSF3R-211ENST00000484762 ZNF608Q9ULD9 1512 aaPredicted RBP23.51■■□□□ 1.35
CSF3R-211ENST00000484762 TARBP1Q13395 1621 aaKnown RBP23.47■■□□□ 1.35
CSF3R-211ENST00000484762 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
CSF3R-211ENST00000484762 OSCARQ8IYS5 282 aa23.43■■□□□ 1.34
CSF3R-211ENST00000484762 POLA1P09884 1462 aaPredicted RBP23.42■■□□□ 1.34
CSF3R-211ENST00000484762 CUX1P39880 1505 aa23.31■■□□□ 1.32
CSF3R-211ENST00000484762 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.32
CSF3R-211ENST00000484762 SUPT5HO00267 1087 aaKnown RBP23.29■■□□□ 1.32
CSF3R-211ENST00000484762 WDR97A6NE52 1622 aa23.29■■□□□ 1.32
CSF3R-211ENST00000484762 RAD54L2Q9Y4B4 1467 aa23.28■■□□□ 1.32
CSF3R-211ENST00000484762 SOGA1O94964 1423 aa23.27■■□□□ 1.32
CSF3R-211ENST00000484762 FGD5Q6ZNL6 1462 aa23.27■■□□□ 1.32
CSF3R-211ENST00000484762 CHD1O14646 1710 aa23.22■■□□□ 1.31
CSF3R-211ENST00000484762 TRIM41Q8WV44 630 aa23.2■■□□□ 1.3
CSF3R-211ENST00000484762 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
CSF3R-211ENST00000484762 RIMBP3CA6NJZ7 1639 aa23.17■■□□□ 1.3
CSF3R-211ENST00000484762 RIMBP3BA6NNM3 1639 aa23.17■■□□□ 1.3
CSF3R-211ENST00000484762 RIMBP3Q9UFD9 1639 aa23.17■■□□□ 1.3
CSF3R-211ENST00000484762 ARHGEF11O15085 1522 aa23.12■■□□□ 1.29
CSF3R-211ENST00000484762 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
CSF3R-211ENST00000484762 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
CSF3R-211ENST00000484762 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
CSF3R-211ENST00000484762 ABCA10Q8WWZ4 1543 aa23.08■■□□□ 1.28
CSF3R-211ENST00000484762 ABCA5Q8WWZ7 1642 aa23.04■■□□□ 1.28
CSF3R-211ENST00000484762 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
CSF3R-211ENST00000484762 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
CSF3R-211ENST00000484762 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
CSF3R-211ENST00000484762 GAPVD1Q14C86 1478 aa23.01■■□□□ 1.27
CSF3R-211ENST00000484762 FBLN2P98095 1184 aa23.01■■□□□ 1.27
CSF3R-211ENST00000484762 SYNJ2O15056 1496 aa22.99■■□□□ 1.27
CSF3R-211ENST00000484762 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
CSF3R-211ENST00000484762 CLASP1Q7Z460 1538 aa22.98■■□□□ 1.27
CSF3R-211ENST00000484762 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
CSF3R-211ENST00000484762 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
CSF3R-211ENST00000484762 ARAP1Q96P48 1450 aa22.9■■□□□ 1.26
CSF3R-211ENST00000484762 CYB5RLQ6IPT4 315 aa22.83■■□□□ 1.25
CSF3R-211ENST00000484762 ADAMTS12P58397 1594 aa22.83■■□□□ 1.25
CSF3R-211ENST00000484762 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
CSF3R-211ENST00000484762 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
CSF3R-211ENST00000484762 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
CSF3R-211ENST00000484762 NUP160Q12769 1436 aa22.73■■□□□ 1.23
CSF3R-211ENST00000484762 CEP170Q5SW79 1584 aa22.71■■□□□ 1.23
CSF3R-211ENST00000484762 SHROOM2Q13796 1616 aa22.64■■□□□ 1.22
CSF3R-211ENST00000484762 ERCC6L2Q5T890 1561 aa22.59■■□□□ 1.21
CSF3R-211ENST00000484762 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
CSF3R-211ENST00000484762 CUL7Q14999 1698 aa22.51■■□□□ 1.19
CSF3R-211ENST00000484762 RUSC2Q8N2Y8 1516 aa22.51■■□□□ 1.19
CSF3R-211ENST00000484762 IGF1RP08069 1367 aa22.5■■□□□ 1.19
CSF3R-211ENST00000484762 TRHP20396 242 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms