RNA–Protein interactions for RNA: ENST00000484736.5

STX1A-209, Transcript of syntaxin 1A, humanhuman

TSL 2

Gene STX1A, Length 928 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-209ENST00000484736 NISCHQ9Y2I1 1504 aa39.65■■■■□ 3.94
STX1A-209ENST00000484736 CCDC180Q9P1Z9 1646 aa35.63■■■■□ 3.29
STX1A-209ENST00000484736 ABCC9O60706 1549 aa35.5■■■■□ 3.27
STX1A-209ENST00000484736 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
STX1A-209ENST00000484736 NACADO15069 1562 aa33.64■■■□□ 2.98
STX1A-209ENST00000484736 DCAF8L2P0C7V8 631 aa33.35■■■□□ 2.93
STX1A-209ENST00000484736 DNAJC5BQ9UF47 199 aa33.33■■■□□ 2.93
STX1A-209ENST00000484736 UNC13AQ9UPW8 1703 aa33.22■■■□□ 2.91
STX1A-209ENST00000484736 MYO15BQ96JP2 1530 aa33.21■■■□□ 2.91
STX1A-209ENST00000484736 PABPN1Q86U42 306 aaKnown RBP eCLIP33.04■■■□□ 2.88
STX1A-209ENST00000484736 BICRAQ9NZM4 1560 aa32.91■■■□□ 2.86
STX1A-209ENST00000484736 ZCCHC6Q5VYS8 1495 aaKnown RBP32.85■■■□□ 2.85
STX1A-209ENST00000484736 DCAF1Q9Y4B6 1507 aa32.78■■■□□ 2.84
STX1A-209ENST00000484736 SHROOM4Q9ULL8 1493 aa32.44■■■□□ 2.78
STX1A-209ENST00000484736 SCRIBQ14160 1630 aa32.39■■■□□ 2.78
STX1A-209ENST00000484736 CC2D2AQ9P2K1 1620 aa32.13■■■□□ 2.73
STX1A-209ENST00000484736 EIF4G1Q04637 1599 aaKnown RBP32.06■■■□□ 2.72
STX1A-209ENST00000484736 CECR2Q9BXF3 1484 aa31.99■■■□□ 2.71
STX1A-209ENST00000484736 NCAPD3P42695 1498 aa31.04■■■□□ 2.56
STX1A-209ENST00000484736 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
STX1A-209ENST00000484736 ATAD2BQ9ULI0 1458 aa30.94■■■□□ 2.54
STX1A-209ENST00000484736 SMARCA2P51531 1590 aa30.87■■■□□ 2.53
STX1A-209ENST00000484736 HMGXB3Q12766 1538 aa30.83■■■□□ 2.53
STX1A-209ENST00000484736 BAZ1AQ9NRL2 1556 aaPredicted RBP30.76■■■□□ 2.52
STX1A-209ENST00000484736 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
STX1A-209ENST00000484736 ERCC6Q03468 1493 aa30.63■■■□□ 2.49
STX1A-209ENST00000484736 CUX2O14529 1486 aa30.62■■■□□ 2.49
STX1A-209ENST00000484736 BAZ1BQ9UIG0 1483 aaKnown RBP30.62■■■□□ 2.49
STX1A-209ENST00000484736 DNAJC5Q9H3Z4 198 aa30.59■■■□□ 2.49
STX1A-209ENST00000484736 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
STX1A-209ENST00000484736 NESP48681 1621 aa30.53■■■□□ 2.48
STX1A-209ENST00000484736 LAMC3Q9Y6N6 1575 aa30.35■■■□□ 2.45
STX1A-209ENST00000484736 THOC2Q8NI27 1593 aaKnown RBP30.25■■■□□ 2.43
STX1A-209ENST00000484736 KIF21AQ7Z4S6 1674 aa30.21■■■□□ 2.43
STX1A-209ENST00000484736 WIZO95785 1651 aa30.2■■■□□ 2.43
STX1A-209ENST00000484736 PDS5BQ9NTI5 1447 aa30.13■■■□□ 2.41
STX1A-209ENST00000484736 CADPSQ9ULU8 1353 aa30.07■■■□□ 2.4
STX1A-209ENST00000484736 RSF1Q96T23 1441 aaPredicted RBP29.91■■■□□ 2.38
STX1A-209ENST00000484736 MRC2Q9UBG0 1479 aa29.87■■■□□ 2.37
STX1A-209ENST00000484736 WDR62O43379 1518 aa29.82■■■□□ 2.36
STX1A-209ENST00000484736 TOP2AP11388 1531 aaKnown RBP29.8■■■□□ 2.36
STX1A-209ENST00000484736 CFTRP13569 1480 aa29.75■■■□□ 2.35
STX1A-209ENST00000484736 CEP164Q9UPV0 1460 aa29.75■■■□□ 2.35
STX1A-209ENST00000484736 FANCD2Q9BXW9 1451 aa29.73■■■□□ 2.35
STX1A-209ENST00000484736 PRDM2Q13029 1718 aa29.58■■■□□ 2.33
STX1A-209ENST00000484736 URB2Q14146 1524 aaKnown RBP29.5■■■□□ 2.31
STX1A-209ENST00000484736 CCDC88BA6NC98 1476 aa29.46■■■□□ 2.31
STX1A-209ENST00000484736 OSCARQ8IYS5 282 aa29.21■■■□□ 2.27
STX1A-209ENST00000484736 TOPBP1Q92547 1522 aa29.19■■■□□ 2.26
STX1A-209ENST00000484736 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
STX1A-209ENST00000484736 IFT140Q96RY7 1462 aa29.17■■■□□ 2.26
STX1A-209ENST00000484736 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
STX1A-209ENST00000484736 ZNF608Q9ULD9 1512 aaPredicted RBP29.12■■■□□ 2.25
STX1A-209ENST00000484736 DNMBPQ6XZF7 1577 aa29.09■■■□□ 2.25
STX1A-209ENST00000484736 EIF4G3O43432 1585 aaKnown RBP28.98■■■□□ 2.23
STX1A-209ENST00000484736 TARBP1Q13395 1621 aaKnown RBP28.98■■■□□ 2.23
STX1A-209ENST00000484736 POLA1P09884 1462 aaPredicted RBP28.88■■■□□ 2.21
STX1A-209ENST00000484736 RIMBP3CA6NJZ7 1639 aa28.87■■■□□ 2.21
STX1A-209ENST00000484736 RIMBP3BA6NNM3 1639 aa28.87■■■□□ 2.21
STX1A-209ENST00000484736 RIMBP3Q9UFD9 1639 aa28.87■■■□□ 2.21
STX1A-209ENST00000484736 AQRO60306 1485 aaKnown RBP eCLIP28.85■■■□□ 2.21
STX1A-209ENST00000484736 CHD1O14646 1710 aa28.83■■■□□ 2.21
STX1A-209ENST00000484736 RAD54L2Q9Y4B4 1467 aa28.76■■■□□ 2.19
STX1A-209ENST00000484736 ARHGEF11O15085 1522 aa28.75■■■□□ 2.19
STX1A-209ENST00000484736 SOGA1O94964 1423 aa28.73■■■□□ 2.19
STX1A-209ENST00000484736 CUX1P39880 1505 aa28.69■■■□□ 2.18
STX1A-209ENST00000484736 FGD5Q6ZNL6 1462 aa28.69■■■□□ 2.18
STX1A-209ENST00000484736 TDRD9Q8NDG6 1382 aaKnown RBP28.67■■■□□ 2.18
STX1A-209ENST00000484736 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
STX1A-209ENST00000484736 FBLN2P98095 1184 aa28.61■■■□□ 2.17
STX1A-209ENST00000484736 SNAPC4Q5SXM2 1469 aa28.55■■■□□ 2.16
STX1A-209ENST00000484736 SUPT5HO00267 1087 aaKnown RBP28.53■■■□□ 2.16
STX1A-209ENST00000484736 MAGI1Q96QZ7 1491 aaPredicted RBP28.51■■■□□ 2.15
STX1A-209ENST00000484736 CYB5RLQ6IPT4 315 aa28.5■■■□□ 2.15
STX1A-209ENST00000484736 GRIN2BQ13224 1484 aa28.49■■■□□ 2.15
STX1A-209ENST00000484736 ARAP1Q96P48 1450 aa28.46■■■□□ 2.15
STX1A-209ENST00000484736 PBRM1Q86U86 1689 aa28.45■■■□□ 2.15
STX1A-209ENST00000484736 CLASP1Q7Z460 1538 aa28.45■■■□□ 2.15
STX1A-209ENST00000484736 CHMP7Q8WUX9 453 aaPredicted RBP28.42■■■□□ 2.14
STX1A-209ENST00000484736 SYNJ1O43426 1573 aa28.41■■■□□ 2.14
STX1A-209ENST00000484736 SYNJ2O15056 1496 aa28.4■■■□□ 2.14
STX1A-209ENST00000484736 GAPVD1Q14C86 1478 aa28.4■■■□□ 2.14
STX1A-209ENST00000484736 ABCA10Q8WWZ4 1543 aa28.39■■■□□ 2.14
STX1A-209ENST00000484736 ABCA5Q8WWZ7 1642 aa28.37■■■□□ 2.13
STX1A-209ENST00000484736 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
STX1A-209ENST00000484736 TOP2BQ02880 1626 aa28.26■■■□□ 2.11
STX1A-209ENST00000484736 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.11
STX1A-209ENST00000484736 TRHP20396 242 aaPredicted RBP28.14■■■□□ 2.1
STX1A-209ENST00000484736 ADAMTS12P58397 1594 aa28.13■■■□□ 2.09
STX1A-209ENST00000484736 GRIN2AQ12879 1464 aa28.13■■■□□ 2.09
STX1A-209ENST00000484736 NUP160Q12769 1436 aa28.05■■■□□ 2.08
STX1A-209ENST00000484736 CEP170Q5SW79 1584 aa28.05■■■□□ 2.08
STX1A-209ENST00000484736 ERICH3Q5RHP9 1530 aa28.04■■■□□ 2.08
STX1A-209ENST00000484736 FHAD1B1AJZ9 1412 aa28.03■■■□□ 2.08
STX1A-209ENST00000484736 ERCC6L2Q5T890 1561 aa27.99■■■□□ 2.07
STX1A-209ENST00000484736 SHROOM2Q13796 1616 aa27.97■■■□□ 2.07
STX1A-209ENST00000484736 PRG4Q92954 1404 aaPredicted RBP27.75■■■□□ 2.03
STX1A-209ENST00000484736 RUSC2Q8N2Y8 1516 aa27.74■■■□□ 2.03
STX1A-209ENST00000484736 JPH4Q96JJ6 628 aa27.74■■■□□ 2.03
STX1A-209ENST00000484736 IGF1RP08069 1367 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms