RNA–Protein interactions for RNA: ENST00000484646.1

ATRAID-205, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 2

Gene ATRAID, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-205ENST00000484646 NISCHQ9Y2I1 1504 aa41.75■■■■■ 4.27
ATRAID-205ENST00000484646 ABCC9O60706 1549 aa38.77■■■■□ 3.8
ATRAID-205ENST00000484646 CCDC180Q9P1Z9 1646 aa37.86■■■■□ 3.65
ATRAID-205ENST00000484646 DNAJC5BQ9UF47 199 aa37.14■■■■□ 3.54
ATRAID-205ENST00000484646 RB1CC1Q8TDY2 1594 aa36.5■■■■□ 3.43
ATRAID-205ENST00000484646 NACADO15069 1562 aa36.02■■■■□ 3.36
ATRAID-205ENST00000484646 PABPN1Q86U42 306 aaKnown RBP eCLIP35.96■■■■□ 3.35
ATRAID-205ENST00000484646 DCAF8L2P0C7V8 631 aa35.71■■■■□ 3.31
ATRAID-205ENST00000484646 UNC13AQ9UPW8 1703 aa35.61■■■■□ 3.29
ATRAID-205ENST00000484646 BICRAQ9NZM4 1560 aa35.42■■■■□ 3.26
ATRAID-205ENST00000484646 MYO15BQ96JP2 1530 aa35.22■■■■□ 3.23
ATRAID-205ENST00000484646 CECR2Q9BXF3 1484 aa35.03■■■■□ 3.2
ATRAID-205ENST00000484646 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.19
ATRAID-205ENST00000484646 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
ATRAID-205ENST00000484646 DNAJC5Q9H3Z4 198 aa34.81■■■■□ 3.16
ATRAID-205ENST00000484646 EIF4G1Q04637 1599 aaKnown RBP34.66■■■■□ 3.14
ATRAID-205ENST00000484646 SCRIBQ14160 1630 aa34.45■■■■□ 3.11
ATRAID-205ENST00000484646 DCAF1Q9Y4B6 1507 aa34.42■■■■□ 3.1
ATRAID-205ENST00000484646 ZCCHC6Q5VYS8 1495 aaKnown RBP34.4■■■■□ 3.1
ATRAID-205ENST00000484646 CUX2O14529 1486 aa33.8■■■■□ 3
ATRAID-205ENST00000484646 ERCC6Q03468 1493 aa33.58■■■□□ 2.97
ATRAID-205ENST00000484646 NCAPD3P42695 1498 aa33.26■■■□□ 2.92
ATRAID-205ENST00000484646 NESP48681 1621 aa33.03■■■□□ 2.88
ATRAID-205ENST00000484646 ATAD2BQ9ULI0 1458 aa33.03■■■□□ 2.88
ATRAID-205ENST00000484646 TRIM41Q8WV44 630 aa32.95■■■□□ 2.87
ATRAID-205ENST00000484646 HMGXB3Q12766 1538 aa32.93■■■□□ 2.86
ATRAID-205ENST00000484646 SMARCA2P51531 1590 aa32.91■■■□□ 2.86
ATRAID-205ENST00000484646 THOC2Q8NI27 1593 aaKnown RBP32.87■■■□□ 2.85
ATRAID-205ENST00000484646 SMARCA4P51532 1647 aa32.77■■■□□ 2.84
ATRAID-205ENST00000484646 BAZ1BQ9UIG0 1483 aaKnown RBP32.69■■■□□ 2.82
ATRAID-205ENST00000484646 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
ATRAID-205ENST00000484646 KIF21AQ7Z4S6 1674 aa32.56■■■□□ 2.8
ATRAID-205ENST00000484646 PDS5BQ9NTI5 1447 aa32.54■■■□□ 2.8
ATRAID-205ENST00000484646 BAZ1AQ9NRL2 1556 aaPredicted RBP32.49■■■□□ 2.79
ATRAID-205ENST00000484646 PEG3Q9GZU2 1588 aa32.45■■■□□ 2.78
ATRAID-205ENST00000484646 MRC2Q9UBG0 1479 aa32.29■■■□□ 2.76
ATRAID-205ENST00000484646 CADPSQ9ULU8 1353 aa32.22■■■□□ 2.75
ATRAID-205ENST00000484646 WDR62O43379 1518 aa32.22■■■□□ 2.75
ATRAID-205ENST00000484646 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
ATRAID-205ENST00000484646 OSCARQ8IYS5 282 aa32.13■■■□□ 2.73
ATRAID-205ENST00000484646 CEP164Q9UPV0 1460 aa31.99■■■□□ 2.71
ATRAID-205ENST00000484646 FANCD2Q9BXW9 1451 aa31.86■■■□□ 2.69
ATRAID-205ENST00000484646 RIMBP3CA6NJZ7 1639 aa31.76■■■□□ 2.67
ATRAID-205ENST00000484646 RIMBP3BA6NNM3 1639 aa31.76■■■□□ 2.67
ATRAID-205ENST00000484646 RIMBP3Q9UFD9 1639 aa31.76■■■□□ 2.67
ATRAID-205ENST00000484646 WIZO95785 1651 aa31.72■■■□□ 2.67
ATRAID-205ENST00000484646 CFTRP13569 1480 aa31.65■■■□□ 2.66
ATRAID-205ENST00000484646 URB2Q14146 1524 aaKnown RBP31.64■■■□□ 2.66
ATRAID-205ENST00000484646 ARHGEF11O15085 1522 aa31.59■■■□□ 2.65
ATRAID-205ENST00000484646 CYB5RLQ6IPT4 315 aa31.44■■■□□ 2.62
ATRAID-205ENST00000484646 TRHP20396 242 aaPredicted RBP31.42■■■□□ 2.62
ATRAID-205ENST00000484646 ZNF608Q9ULD9 1512 aaPredicted RBP31.39■■■□□ 2.62
ATRAID-205ENST00000484646 IFT140Q96RY7 1462 aa31.38■■■□□ 2.61
ATRAID-205ENST00000484646 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
ATRAID-205ENST00000484646 PRDM2Q13029 1718 aa31.23■■■□□ 2.59
ATRAID-205ENST00000484646 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
ATRAID-205ENST00000484646 AEBP2Q6ZN18 517 aaPredicted RBP31.19■■■□□ 2.58
ATRAID-205ENST00000484646 EIF4G3O43432 1585 aaKnown RBP31.18■■■□□ 2.58
ATRAID-205ENST00000484646 RSF1Q96T23 1441 aaPredicted RBP31.16■■■□□ 2.58
ATRAID-205ENST00000484646 TOPBP1Q92547 1522 aa31.14■■■□□ 2.58
ATRAID-205ENST00000484646 CHD1O14646 1710 aa31.11■■■□□ 2.57
ATRAID-205ENST00000484646 FBLN2P98095 1184 aa31.05■■■□□ 2.56
ATRAID-205ENST00000484646 ABCC8Q09428 1581 aa31.04■■■□□ 2.56
ATRAID-205ENST00000484646 AQRO60306 1485 aaKnown RBP eCLIP31.01■■■□□ 2.562e-7■■■□□ 15.2
ATRAID-205ENST00000484646 DNMBPQ6XZF7 1577 aa30.95■■■□□ 2.54
ATRAID-205ENST00000484646 CCDC88BA6NC98 1476 aa30.92■■■□□ 2.54
ATRAID-205ENST00000484646 TARBP1Q13395 1621 aaKnown RBP30.91■■■□□ 2.54
ATRAID-205ENST00000484646 POLA1P09884 1462 aaPredicted RBP30.77■■■□□ 2.52
ATRAID-205ENST00000484646 CLASP1Q7Z460 1538 aa30.73■■■□□ 2.51
ATRAID-205ENST00000484646 TDRD9Q8NDG6 1382 aaKnown RBP30.69■■■□□ 2.5
ATRAID-205ENST00000484646 SNAPC4Q5SXM2 1469 aa30.68■■■□□ 2.5
ATRAID-205ENST00000484646 RAD54L2Q9Y4B4 1467 aa30.68■■■□□ 2.5
ATRAID-205ENST00000484646 SYNJ1O43426 1573 aa30.67■■■□□ 2.5
ATRAID-205ENST00000484646 CHMP7Q8WUX9 453 aaPredicted RBP30.66■■■□□ 2.5
ATRAID-205ENST00000484646 SOGA1O94964 1423 aa30.64■■■□□ 2.49
ATRAID-205ENST00000484646 WDR97A6NE52 1622 aa30.56■■■□□ 2.48
ATRAID-205ENST00000484646 MAGI1Q96QZ7 1491 aaPredicted RBP30.56■■■□□ 2.48
ATRAID-205ENST00000484646 GAPVD1Q14C86 1478 aa30.51■■■□□ 2.48
ATRAID-205ENST00000484646 SYNJ2O15056 1496 aa30.48■■■□□ 2.47
ATRAID-205ENST00000484646 GRIN2BQ13224 1484 aa30.47■■■□□ 2.47
ATRAID-205ENST00000484646 FGD5Q6ZNL6 1462 aa30.45■■■□□ 2.47
ATRAID-205ENST00000484646 PBRM1Q86U86 1689 aa30.26■■■□□ 2.43
ATRAID-205ENST00000484646 CUX1P39880 1505 aa30.26■■■□□ 2.43
ATRAID-205ENST00000484646 ERCC6L2Q5T890 1561 aa30.19■■■□□ 2.42
ATRAID-205ENST00000484646 ABCA5Q8WWZ7 1642 aa30.07■■■□□ 2.4
ATRAID-205ENST00000484646 CEP170Q5SW79 1584 aa30.07■■■□□ 2.4
ATRAID-205ENST00000484646 GRIN2AQ12879 1464 aa30.07■■■□□ 2.4
ATRAID-205ENST00000484646 ABCA10Q8WWZ4 1543 aa30.05■■■□□ 2.4
ATRAID-205ENST00000484646 KIF13AQ9H1H9 1805 aa30.05■■■□□ 2.4
ATRAID-205ENST00000484646 NUP160Q12769 1436 aa29.99■■■□□ 2.39
ATRAID-205ENST00000484646 SHROOM2Q13796 1616 aa29.95■■■□□ 2.38
ATRAID-205ENST00000484646 ADAMTS12P58397 1594 aa29.92■■■□□ 2.38
ATRAID-205ENST00000484646 ILDR1Q86SU0 546 aaPredicted RBP29.87■■■□□ 2.37
ATRAID-205ENST00000484646 FAM69CQ0P6D2 419 aa29.86■■■□□ 2.37
ATRAID-205ENST00000484646 ABCC10Q5T3U5 1492 aa29.82■■■□□ 2.36
ATRAID-205ENST00000484646 FHAD1B1AJZ9 1412 aa29.82■■■□□ 2.36
ATRAID-205ENST00000484646 KDM4FA0A1W2PPD8 638 aa29.81■■■□□ 2.36
ATRAID-205ENST00000484646 PRG4Q92954 1404 aaPredicted RBP29.8■■■□□ 2.36
ATRAID-205ENST00000484646 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
ATRAID-205ENST00000484646 NPM1P06748 294 aaKnown RBP eCLIP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms