RNA–Protein interactions for RNA: ENST00000484608.2

SERP1-204, Transcript of stress associated endoplasmic reticulum protein 1, humanhuman

TSL 3

Gene SERP1, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERP1-204ENST00000484608 NISCHQ9Y2I1 1504 aa22.89■■□□□ 1.26
SERP1-204ENST00000484608 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
SERP1-204ENST00000484608 ABCC9O60706 1549 aa20.53■□□□□ 0.88
SERP1-204ENST00000484608 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
SERP1-204ENST00000484608 NACADO15069 1562 aa19.5■□□□□ 0.71
SERP1-204ENST00000484608 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
SERP1-204ENST00000484608 MYO15BQ96JP2 1530 aa19.3■□□□□ 0.68
SERP1-204ENST00000484608 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
SERP1-204ENST00000484608 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
SERP1-204ENST00000484608 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
SERP1-204ENST00000484608 BICRAQ9NZM4 1560 aa19.03■□□□□ 0.64
SERP1-204ENST00000484608 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
SERP1-204ENST00000484608 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
SERP1-204ENST00000484608 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
SERP1-204ENST00000484608 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
SERP1-204ENST00000484608 CC2D2AQ9P2K1 1620 aa18.6■□□□□ 0.57
SERP1-204ENST00000484608 EIF4G1Q04637 1599 aaKnown RBP18.57■□□□□ 0.56
SERP1-204ENST00000484608 CECR2Q9BXF3 1484 aa18.55■□□□□ 0.56
SERP1-204ENST00000484608 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
SERP1-204ENST00000484608 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
SERP1-204ENST00000484608 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
SERP1-204ENST00000484608 HMGXB3Q12766 1538 aa17.87■□□□□ 0.45
SERP1-204ENST00000484608 SMARCA4P51532 1647 aa17.86■□□□□ 0.45
SERP1-204ENST00000484608 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
SERP1-204ENST00000484608 CUX2O14529 1486 aa17.84■□□□□ 0.45
SERP1-204ENST00000484608 BAZ1AQ9NRL2 1556 aaPredicted RBP17.79■□□□□ 0.44
SERP1-204ENST00000484608 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
SERP1-204ENST00000484608 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
SERP1-204ENST00000484608 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
SERP1-204ENST00000484608 NESP48681 1621 aa17.62■□□□□ 0.41
SERP1-204ENST00000484608 LAMC3Q9Y6N6 1575 aa17.61■□□□□ 0.41
SERP1-204ENST00000484608 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
SERP1-204ENST00000484608 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
SERP1-204ENST00000484608 PDS5BQ9NTI5 1447 aa17.48■□□□□ 0.39
SERP1-204ENST00000484608 KIF21AQ7Z4S6 1674 aa17.43■□□□□ 0.38
SERP1-204ENST00000484608 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
SERP1-204ENST00000484608 WIZO95785 1651 aa17.36■□□□□ 0.37
SERP1-204ENST00000484608 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
SERP1-204ENST00000484608 WDR62O43379 1518 aa17.31■□□□□ 0.36
SERP1-204ENST00000484608 CFTRP13569 1480 aa17.23■□□□□ 0.35
SERP1-204ENST00000484608 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
SERP1-204ENST00000484608 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
SERP1-204ENST00000484608 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
SERP1-204ENST00000484608 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
SERP1-204ENST00000484608 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
SERP1-204ENST00000484608 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
SERP1-204ENST00000484608 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
SERP1-204ENST00000484608 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
SERP1-204ENST00000484608 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
SERP1-204ENST00000484608 IFT140Q96RY7 1462 aa16.92■□□□□ 0.3
SERP1-204ENST00000484608 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
SERP1-204ENST00000484608 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
SERP1-204ENST00000484608 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
SERP1-204ENST00000484608 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
SERP1-204ENST00000484608 EIF4G3O43432 1585 aaKnown RBP16.76■□□□□ 0.27
SERP1-204ENST00000484608 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
SERP1-204ENST00000484608 RIMBP3CA6NJZ7 1639 aa16.73■□□□□ 0.27
SERP1-204ENST00000484608 RIMBP3BA6NNM3 1639 aa16.73■□□□□ 0.27
SERP1-204ENST00000484608 RIMBP3Q9UFD9 1639 aa16.73■□□□□ 0.27
SERP1-204ENST00000484608 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
SERP1-204ENST00000484608 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
SERP1-204ENST00000484608 WDR97A6NE52 1622 aa16.66■□□□□ 0.26
SERP1-204ENST00000484608 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.26
SERP1-204ENST00000484608 CHD1O14646 1710 aa16.63■□□□□ 0.25
SERP1-204ENST00000484608 SOGA1O94964 1423 aa16.6■□□□□ 0.25
SERP1-204ENST00000484608 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
SERP1-204ENST00000484608 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
SERP1-204ENST00000484608 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
SERP1-204ENST00000484608 CUX1P39880 1505 aa16.53■□□□□ 0.24
SERP1-204ENST00000484608 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
SERP1-204ENST00000484608 FBLN2P98095 1184 aa16.51■□□□□ 0.23
SERP1-204ENST00000484608 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
SERP1-204ENST00000484608 SNAPC4Q5SXM2 1469 aa16.5■□□□□ 0.23
SERP1-204ENST00000484608 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
SERP1-204ENST00000484608 GRIN2BQ13224 1484 aa16.49■□□□□ 0.23
SERP1-204ENST00000484608 CLASP1Q7Z460 1538 aa16.48■□□□□ 0.23
SERP1-204ENST00000484608 SYNJ1O43426 1573 aa16.47■□□□□ 0.23
SERP1-204ENST00000484608 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
SERP1-204ENST00000484608 CHMP7Q8WUX9 453 aaPredicted RBP16.44■□□□□ 0.22
SERP1-204ENST00000484608 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
SERP1-204ENST00000484608 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
SERP1-204ENST00000484608 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
SERP1-204ENST00000484608 ABCA5Q8WWZ7 1642 aa16.38■□□□□ 0.21
SERP1-204ENST00000484608 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
SERP1-204ENST00000484608 WRNQ14191 1432 aaPredicted RBP eCLIP16.32■□□□□ 0.2
SERP1-204ENST00000484608 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
SERP1-204ENST00000484608 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
SERP1-204ENST00000484608 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
SERP1-204ENST00000484608 GRIN2AQ12879 1464 aa16.28■□□□□ 0.2
SERP1-204ENST00000484608 NUP160Q12769 1436 aa16.25■□□□□ 0.19
SERP1-204ENST00000484608 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
SERP1-204ENST00000484608 ERICH3Q5RHP9 1530 aa16.23■□□□□ 0.19
SERP1-204ENST00000484608 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
SERP1-204ENST00000484608 CEP170Q5SW79 1584 aa16.19■□□□□ 0.18
SERP1-204ENST00000484608 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
SERP1-204ENST00000484608 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
SERP1-204ENST00000484608 PRG4Q92954 1404 aaPredicted RBP16.04■□□□□ 0.16
SERP1-204ENST00000484608 JPH4Q96JJ6 628 aa16.04■□□□□ 0.16
SERP1-204ENST00000484608 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
SERP1-204ENST00000484608 KIF13AQ9H1H9 1805 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms