RNA–Protein interactions for RNA: ENST00000484588.1

PPM1F-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 5

Gene PPM1F, Length 348 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-206ENST00000484588 NISCHQ9Y2I1 1504 aa23.96■■□□□ 1.43
PPM1F-206ENST00000484588 ABCC9O60706 1549 aa22.42■■□□□ 1.18
PPM1F-206ENST00000484588 CCDC180Q9P1Z9 1646 aa21.86■■□□□ 1.09
PPM1F-206ENST00000484588 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
PPM1F-206ENST00000484588 RB1CC1Q8TDY2 1594 aa21.13■□□□□ 0.97
PPM1F-206ENST00000484588 NACADO15069 1562 aa20.84■□□□□ 0.93
PPM1F-206ENST00000484588 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
PPM1F-206ENST00000484588 UNC13AQ9UPW8 1703 aa20.57■□□□□ 0.88
PPM1F-206ENST00000484588 BICRAQ9NZM4 1560 aa20.52■□□□□ 0.88
PPM1F-206ENST00000484588 DNAJC5Q9H3Z4 198 aa20.49■□□□□ 0.87
PPM1F-206ENST00000484588 MYO15BQ96JP2 1530 aa20.4■□□□□ 0.86
PPM1F-206ENST00000484588 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
PPM1F-206ENST00000484588 DCAF8L2P0C7V8 631 aa20.33■□□□□ 0.85
PPM1F-206ENST00000484588 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
PPM1F-206ENST00000484588 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.83
PPM1F-206ENST00000484588 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.8
PPM1F-206ENST00000484588 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
PPM1F-206ENST00000484588 CUX2O14529 1486 aa19.75■□□□□ 0.75
PPM1F-206ENST00000484588 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
PPM1F-206ENST00000484588 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
PPM1F-206ENST00000484588 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
PPM1F-206ENST00000484588 NCAPD3P42695 1498 aa19.25■□□□□ 0.67
PPM1F-206ENST00000484588 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
PPM1F-206ENST00000484588 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
PPM1F-206ENST00000484588 NESP48681 1621 aa19.06■□□□□ 0.64
PPM1F-206ENST00000484588 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
PPM1F-206ENST00000484588 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
PPM1F-206ENST00000484588 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
PPM1F-206ENST00000484588 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
PPM1F-206ENST00000484588 SMARCA4P51532 1647 aa18.83■□□□□ 0.61
PPM1F-206ENST00000484588 PDS5BQ9NTI5 1447 aa18.82■□□□□ 0.6
PPM1F-206ENST00000484588 BAZ1BQ9UIG0 1483 aaKnown RBP18.81■□□□□ 0.6
PPM1F-206ENST00000484588 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
PPM1F-206ENST00000484588 PEG3Q9GZU2 1588 aa18.74■□□□□ 0.59
PPM1F-206ENST00000484588 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
PPM1F-206ENST00000484588 WDR62O43379 1518 aa18.69■□□□□ 0.58
PPM1F-206ENST00000484588 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
PPM1F-206ENST00000484588 OSCARQ8IYS5 282 aa18.64■□□□□ 0.57
PPM1F-206ENST00000484588 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
PPM1F-206ENST00000484588 RIMBP3CA6NJZ7 1639 aa18.48■□□□□ 0.55
PPM1F-206ENST00000484588 RIMBP3BA6NNM3 1639 aa18.48■□□□□ 0.55
PPM1F-206ENST00000484588 RIMBP3Q9UFD9 1639 aa18.48■□□□□ 0.55
PPM1F-206ENST00000484588 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.54
PPM1F-206ENST00000484588 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
PPM1F-206ENST00000484588 ARHGEF11O15085 1522 aa18.38■□□□□ 0.53
PPM1F-206ENST00000484588 FANCD2Q9BXW9 1451 aa18.36■□□□□ 0.53
PPM1F-206ENST00000484588 CFTRP13569 1480 aa18.26■□□□□ 0.51
PPM1F-206ENST00000484588 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
PPM1F-206ENST00000484588 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
PPM1F-206ENST00000484588 TRHP20396 242 aaPredicted RBP18.2■□□□□ 0.5
PPM1F-206ENST00000484588 CYB5RLQ6IPT4 315 aa18.2■□□□□ 0.5
PPM1F-206ENST00000484588 ARAP1Q96P48 1450 aa18.14■□□□□ 0.5
PPM1F-206ENST00000484588 IFT140Q96RY7 1462 aa18.14■□□□□ 0.5
PPM1F-206ENST00000484588 WIZO95785 1651 aa18.12■□□□□ 0.49
PPM1F-206ENST00000484588 ZNF608Q9ULD9 1512 aaPredicted RBP18.11■□□□□ 0.49
PPM1F-206ENST00000484588 RSF1Q96T23 1441 aaPredicted RBP18.09■□□□□ 0.49
PPM1F-206ENST00000484588 EIF4G3O43432 1585 aaKnown RBP18.01■□□□□ 0.47
PPM1F-206ENST00000484588 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
PPM1F-206ENST00000484588 CHD1O14646 1710 aa17.96■□□□□ 0.47
PPM1F-206ENST00000484588 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
PPM1F-206ENST00000484588 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
PPM1F-206ENST00000484588 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
PPM1F-206ENST00000484588 TARBP1Q13395 1621 aaKnown RBP17.84■□□□□ 0.45
PPM1F-206ENST00000484588 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.452e-6■■■□□ 15.2
PPM1F-206ENST00000484588 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.44
PPM1F-206ENST00000484588 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
PPM1F-206ENST00000484588 FBLN2P98095 1184 aa17.8■□□□□ 0.44
PPM1F-206ENST00000484588 SYNJ1O43426 1573 aa17.74■□□□□ 0.43
PPM1F-206ENST00000484588 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
PPM1F-206ENST00000484588 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
PPM1F-206ENST00000484588 CCDC88BA6NC98 1476 aa17.68■□□□□ 0.42
PPM1F-206ENST00000484588 SNAPC4Q5SXM2 1469 aa17.67■□□□□ 0.42
PPM1F-206ENST00000484588 GAPVD1Q14C86 1478 aa17.66■□□□□ 0.42
PPM1F-206ENST00000484588 MAGI1Q96QZ7 1491 aaPredicted RBP17.66■□□□□ 0.42
PPM1F-206ENST00000484588 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
PPM1F-206ENST00000484588 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
PPM1F-206ENST00000484588 SYNJ2O15056 1496 aa17.6■□□□□ 0.41
PPM1F-206ENST00000484588 RAD54L2Q9Y4B4 1467 aa17.6■□□□□ 0.41
PPM1F-206ENST00000484588 SOGA1O94964 1423 aa17.59■□□□□ 0.41
PPM1F-206ENST00000484588 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
PPM1F-206ENST00000484588 ILDR1Q86SU0 546 aaPredicted RBP17.55■□□□□ 0.4
PPM1F-206ENST00000484588 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
PPM1F-206ENST00000484588 KIF13AQ9H1H9 1805 aa17.44■□□□□ 0.38
PPM1F-206ENST00000484588 ERCC6L2Q5T890 1561 aa17.4■□□□□ 0.38
PPM1F-206ENST00000484588 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
PPM1F-206ENST00000484588 KDM4FA0A1W2PPD8 638 aa17.36■□□□□ 0.37
PPM1F-206ENST00000484588 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
PPM1F-206ENST00000484588 CUX1P39880 1505 aa17.34■□□□□ 0.37
PPM1F-206ENST00000484588 SHROOM2Q13796 1616 aa17.33■□□□□ 0.37
PPM1F-206ENST00000484588 GRIN2AQ12879 1464 aa17.33■□□□□ 0.37
PPM1F-206ENST00000484588 NUP160Q12769 1436 aa17.33■□□□□ 0.36
PPM1F-206ENST00000484588 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
PPM1F-206ENST00000484588 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
PPM1F-206ENST00000484588 ABCA10Q8WWZ4 1543 aa17.29■□□□□ 0.36
PPM1F-206ENST00000484588 MAPKBP1O60336 1514 aa17.26■□□□□ 0.35
PPM1F-206ENST00000484588 KDM6BO15054 1643 aa17.25■□□□□ 0.35
PPM1F-206ENST00000484588 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
PPM1F-206ENST00000484588 ADAMTS12P58397 1594 aa17.23■□□□□ 0.35
PPM1F-206ENST00000484588 DIP2BQ9P265 1576 aa17.23■□□□□ 0.35
PPM1F-206ENST00000484588 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms