RNA–Protein interactions for RNA: ENST00000484574.1

POLR1B-213, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2

Gene POLR1B, Length 551 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-213ENST00000484574 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.31
POLR1B-213ENST00000484574 CCDC180Q9P1Z9 1646 aa26.33■■□□□ 1.81
POLR1B-213ENST00000484574 ABCC9O60706 1549 aa25.74■■□□□ 1.71
POLR1B-213ENST00000484574 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
POLR1B-213ENST00000484574 NACADO15069 1562 aa24.81■■□□□ 1.56
POLR1B-213ENST00000484574 MYO15BQ96JP2 1530 aa24.7■■□□□ 1.54
POLR1B-213ENST00000484574 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
POLR1B-213ENST00000484574 ZCCHC6Q5VYS8 1495 aaKnown RBP24.5■■□□□ 1.51
POLR1B-213ENST00000484574 DCAF1Q9Y4B6 1507 aa24.48■■□□□ 1.51
POLR1B-213ENST00000484574 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
POLR1B-213ENST00000484574 BICRAQ9NZM4 1560 aa24.02■■□□□ 1.44
POLR1B-213ENST00000484574 PABPN1Q86U42 306 aaKnown RBP eCLIP23.99■■□□□ 1.43
POLR1B-213ENST00000484574 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
POLR1B-213ENST00000484574 SCRIBQ14160 1630 aa23.82■■□□□ 1.4
POLR1B-213ENST00000484574 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
POLR1B-213ENST00000484574 EIF4G1Q04637 1599 aaKnown RBP23.42■■□□□ 1.34
POLR1B-213ENST00000484574 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
POLR1B-213ENST00000484574 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
POLR1B-213ENST00000484574 NCAPD3P42695 1498 aa22.89■■□□□ 1.25
POLR1B-213ENST00000484574 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
POLR1B-213ENST00000484574 SMARCA4P51532 1647 aa22.87■■□□□ 1.25
POLR1B-213ENST00000484574 SMARCA2P51531 1590 aa22.83■■□□□ 1.25
POLR1B-213ENST00000484574 ATAD2BQ9ULI0 1458 aa22.8■■□□□ 1.24
POLR1B-213ENST00000484574 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
POLR1B-213ENST00000484574 PEG3Q9GZU2 1588 aa22.75■■□□□ 1.23
POLR1B-213ENST00000484574 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
POLR1B-213ENST00000484574 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
POLR1B-213ENST00000484574 WIZO95785 1651 aa22.35■■□□□ 1.17
POLR1B-213ENST00000484574 RSF1Q96T23 1441 aaPredicted RBP22.34■■□□□ 1.17
POLR1B-213ENST00000484574 LAMC3Q9Y6N6 1575 aa22.3■■□□□ 1.16
POLR1B-213ENST00000484574 ERCC6Q03468 1493 aa22.26■■□□□ 1.15
POLR1B-213ENST00000484574 NESP48681 1621 aa22.21■■□□□ 1.15
POLR1B-213ENST00000484574 CUX2O14529 1486 aa22.21■■□□□ 1.15
POLR1B-213ENST00000484574 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
POLR1B-213ENST00000484574 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
POLR1B-213ENST00000484574 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
POLR1B-213ENST00000484574 CFTRP13569 1480 aa22.02■■□□□ 1.12
POLR1B-213ENST00000484574 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
POLR1B-213ENST00000484574 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
POLR1B-213ENST00000484574 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
POLR1B-213ENST00000484574 MRC2Q9UBG0 1479 aa21.89■■□□□ 1.09
POLR1B-213ENST00000484574 FANCD2Q9BXW9 1451 aa21.87■■□□□ 1.09
POLR1B-213ENST00000484574 CEP164Q9UPV0 1460 aa21.87■■□□□ 1.09
POLR1B-213ENST00000484574 WDR62O43379 1518 aa21.84■■□□□ 1.09
POLR1B-213ENST00000484574 PRDM2Q13029 1718 aa21.83■■□□□ 1.08
POLR1B-213ENST00000484574 DNAJC5Q9H3Z4 198 aa21.68■■□□□ 1.06
POLR1B-213ENST00000484574 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
POLR1B-213ENST00000484574 URB2Q14146 1524 aaKnown RBP21.63■■□□□ 1.05
POLR1B-213ENST00000484574 SUPT5HO00267 1087 aaKnown RBP21.52■■□□□ 1.04
POLR1B-213ENST00000484574 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
POLR1B-213ENST00000484574 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
POLR1B-213ENST00000484574 IFT140Q96RY7 1462 aa21.46■■□□□ 1.03
POLR1B-213ENST00000484574 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
POLR1B-213ENST00000484574 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
POLR1B-213ENST00000484574 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
POLR1B-213ENST00000484574 ZNF608Q9ULD9 1512 aaPredicted RBP21.25■□□□□ 0.99
POLR1B-213ENST00000484574 CUX1P39880 1505 aa21.24■□□□□ 0.99
POLR1B-213ENST00000484574 SOGA1O94964 1423 aa21.23■□□□□ 0.99
POLR1B-213ENST00000484574 OSCARQ8IYS5 282 aa21.22■□□□□ 0.99
POLR1B-213ENST00000484574 EIF4G3O43432 1585 aaKnown RBP21.21■□□□□ 0.99
POLR1B-213ENST00000484574 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
POLR1B-213ENST00000484574 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.98
POLR1B-213ENST00000484574 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.975e-6■■■□□ 16.9
POLR1B-213ENST00000484574 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.97
POLR1B-213ENST00000484574 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
POLR1B-213ENST00000484574 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
POLR1B-213ENST00000484574 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
POLR1B-213ENST00000484574 ABCA10Q8WWZ4 1543 aa21.06■□□□□ 0.96
POLR1B-213ENST00000484574 GRIN2BQ13224 1484 aa21.03■□□□□ 0.96
POLR1B-213ENST00000484574 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
POLR1B-213ENST00000484574 GAPVD1Q14C86 1478 aa20.99■□□□□ 0.95
POLR1B-213ENST00000484574 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
POLR1B-213ENST00000484574 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
POLR1B-213ENST00000484574 CHD1O14646 1710 aa20.95■□□□□ 0.94
POLR1B-213ENST00000484574 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
POLR1B-213ENST00000484574 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
POLR1B-213ENST00000484574 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
POLR1B-213ENST00000484574 FBLN2P98095 1184 aa20.89■□□□□ 0.93
POLR1B-213ENST00000484574 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.93
POLR1B-213ENST00000484574 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.93
POLR1B-213ENST00000484574 ARHGEF11O15085 1522 aa20.81■□□□□ 0.92
POLR1B-213ENST00000484574 RIMBP3CA6NJZ7 1639 aa20.81■□□□□ 0.92
POLR1B-213ENST00000484574 RIMBP3BA6NNM3 1639 aa20.81■□□□□ 0.92
POLR1B-213ENST00000484574 RIMBP3Q9UFD9 1639 aa20.81■□□□□ 0.92
POLR1B-213ENST00000484574 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
POLR1B-213ENST00000484574 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.91
POLR1B-213ENST00000484574 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
POLR1B-213ENST00000484574 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
POLR1B-213ENST00000484574 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
POLR1B-213ENST00000484574 KIF27Q86VH2 1401 aa20.69■□□□□ 0.9
POLR1B-213ENST00000484574 NUP160Q12769 1436 aa20.68■□□□□ 0.9
POLR1B-213ENST00000484574 ARAP1Q96P48 1450 aa20.61■□□□□ 0.89
POLR1B-213ENST00000484574 IGF1RP08069 1367 aa20.6■□□□□ 0.89
POLR1B-213ENST00000484574 CUL7Q14999 1698 aa20.59■□□□□ 0.89
POLR1B-213ENST00000484574 CYB5RLQ6IPT4 315 aa20.59■□□□□ 0.89
POLR1B-213ENST00000484574 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
POLR1B-213ENST00000484574 SHROOM2Q13796 1616 aa20.54■□□□□ 0.88
POLR1B-213ENST00000484574 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
POLR1B-213ENST00000484574 KIAA0586Q9BVV6 1533 aa20.46■□□□□ 0.87
POLR1B-213ENST00000484574 JPH4Q96JJ6 628 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms