RNA–Protein interactions for RNA: ENST00000484537.2

ATAD3C-203, Transcript of ATPase family, AAA domain containing 3C, humanhuman

TSL 1 (best)

Gene ATAD3C, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3C-203ENST00000484537 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
ATAD3C-203ENST00000484537 ABCC9O60706 1549 aa31.48■■■□□ 2.63
ATAD3C-203ENST00000484537 CCDC180Q9P1Z9 1646 aa30.55■■■□□ 2.48
ATAD3C-203ENST00000484537 DNAJC5BQ9UF47 199 aa30.28■■■□□ 2.44
ATAD3C-203ENST00000484537 RB1CC1Q8TDY2 1594 aa29.45■■■□□ 2.31
ATAD3C-203ENST00000484537 PABPN1Q86U42 306 aaKnown RBP eCLIP29.22■■■□□ 2.27
ATAD3C-203ENST00000484537 UNC13AQ9UPW8 1703 aa29.04■■■□□ 2.24
ATAD3C-203ENST00000484537 NACADO15069 1562 aa29.01■■■□□ 2.24
ATAD3C-203ENST00000484537 DCAF8L2P0C7V8 631 aa28.94■■■□□ 2.22
ATAD3C-203ENST00000484537 BICRAQ9NZM4 1560 aa28.77■■■□□ 2.2
ATAD3C-203ENST00000484537 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
ATAD3C-203ENST00000484537 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
ATAD3C-203ENST00000484537 MYO15BQ96JP2 1530 aa28.25■■■□□ 2.11
ATAD3C-203ENST00000484537 DNAJC5Q9H3Z4 198 aa28.16■■■□□ 2.1
ATAD3C-203ENST00000484537 EIF4G1Q04637 1599 aaKnown RBP28.07■■■□□ 2.08
ATAD3C-203ENST00000484537 SCRIBQ14160 1630 aa27.99■■■□□ 2.07
ATAD3C-203ENST00000484537 SHROOM4Q9ULL8 1493 aa27.96■■■□□ 2.07
ATAD3C-203ENST00000484537 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
ATAD3C-203ENST00000484537 DCAF1Q9Y4B6 1507 aa27.67■■■□□ 2.02
ATAD3C-203ENST00000484537 CUX2O14529 1486 aa27.23■■□□□ 1.95
ATAD3C-203ENST00000484537 ERCC6Q03468 1493 aa27.13■■□□□ 1.93
ATAD3C-203ENST00000484537 NESP48681 1621 aa26.87■■□□□ 1.89
ATAD3C-203ENST00000484537 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
ATAD3C-203ENST00000484537 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
ATAD3C-203ENST00000484537 ATAD2BQ9ULI0 1458 aa26.69■■□□□ 1.86
ATAD3C-203ENST00000484537 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
ATAD3C-203ENST00000484537 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
ATAD3C-203ENST00000484537 SMARCA2P51531 1590 aa26.54■■□□□ 1.84
ATAD3C-203ENST00000484537 SMARCA4P51532 1647 aa26.53■■□□□ 1.84
ATAD3C-203ENST00000484537 KIF21AQ7Z4S6 1674 aa26.5■■□□□ 1.83
ATAD3C-203ENST00000484537 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.82
ATAD3C-203ENST00000484537 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
ATAD3C-203ENST00000484537 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
ATAD3C-203ENST00000484537 PDS5BQ9NTI5 1447 aa26.18■■□□□ 1.78
ATAD3C-203ENST00000484537 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
ATAD3C-203ENST00000484537 MROH2BQ7Z745 1585 aa26.09■■□□□ 1.77
ATAD3C-203ENST00000484537 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
ATAD3C-203ENST00000484537 WDR62O43379 1518 aa26.04■■□□□ 1.76
ATAD3C-203ENST00000484537 CADPSQ9ULU8 1353 aa25.98■■□□□ 1.75
ATAD3C-203ENST00000484537 OSCARQ8IYS5 282 aa25.89■■□□□ 1.74
ATAD3C-203ENST00000484537 CEP164Q9UPV0 1460 aa25.82■■□□□ 1.72
ATAD3C-203ENST00000484537 RIMBP3CA6NJZ7 1639 aa25.81■■□□□ 1.72
ATAD3C-203ENST00000484537 RIMBP3BA6NNM3 1639 aa25.81■■□□□ 1.72
ATAD3C-203ENST00000484537 RIMBP3Q9UFD9 1639 aa25.81■■□□□ 1.72
ATAD3C-203ENST00000484537 WIZO95785 1651 aa25.8■■□□□ 1.72
ATAD3C-203ENST00000484537 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
ATAD3C-203ENST00000484537 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
ATAD3C-203ENST00000484537 ARHGEF11O15085 1522 aa25.58■■□□□ 1.69
ATAD3C-203ENST00000484537 CFTRP13569 1480 aa25.53■■□□□ 1.68
ATAD3C-203ENST00000484537 ZNF608Q9ULD9 1512 aaPredicted RBP25.51■■□□□ 1.67
ATAD3C-203ENST00000484537 CYB5RLQ6IPT4 315 aa25.47■■□□□ 1.67
ATAD3C-203ENST00000484537 TRHP20396 242 aaPredicted RBP25.42■■□□□ 1.66
ATAD3C-203ENST00000484537 CHD1O14646 1710 aa25.32■■□□□ 1.64
ATAD3C-203ENST00000484537 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
ATAD3C-203ENST00000484537 ARAP1Q96P48 1450 aa25.31■■□□□ 1.64
ATAD3C-203ENST00000484537 EIF4G3O43432 1585 aaKnown RBP25.29■■□□□ 1.64
ATAD3C-203ENST00000484537 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
ATAD3C-203ENST00000484537 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
ATAD3C-203ENST00000484537 TOPBP1Q92547 1522 aa25.2■■□□□ 1.62
ATAD3C-203ENST00000484537 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
ATAD3C-203ENST00000484537 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
ATAD3C-203ENST00000484537 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.62
ATAD3C-203ENST00000484537 FBLN2P98095 1184 aa25.13■■□□□ 1.61
ATAD3C-203ENST00000484537 TARBP1Q13395 1621 aaKnown RBP25.06■■□□□ 1.6
ATAD3C-203ENST00000484537 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
ATAD3C-203ENST00000484537 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
ATAD3C-203ENST00000484537 RAD54L2Q9Y4B4 1467 aa24.91■■□□□ 1.58
ATAD3C-203ENST00000484537 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.58
ATAD3C-203ENST00000484537 ABCC8Q09428 1581 aa24.89■■□□□ 1.58
ATAD3C-203ENST00000484537 CLASP1Q7Z460 1538 aa24.89■■□□□ 1.57
ATAD3C-203ENST00000484537 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
ATAD3C-203ENST00000484537 SNAPC4Q5SXM2 1469 aa24.84■■□□□ 1.57
ATAD3C-203ENST00000484537 SYNJ1O43426 1573 aa24.74■■□□□ 1.55
ATAD3C-203ENST00000484537 SOGA1O94964 1423 aa24.73■■□□□ 1.55
ATAD3C-203ENST00000484537 CHMP7Q8WUX9 453 aaPredicted RBP24.71■■□□□ 1.55
ATAD3C-203ENST00000484537 GAPVD1Q14C86 1478 aa24.67■■□□□ 1.54
ATAD3C-203ENST00000484537 FGD5Q6ZNL6 1462 aa24.65■■□□□ 1.54
ATAD3C-203ENST00000484537 ERCC6L2Q5T890 1561 aa24.62■■□□□ 1.53
ATAD3C-203ENST00000484537 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
ATAD3C-203ENST00000484537 SYNJ2O15056 1496 aa24.58■■□□□ 1.52
ATAD3C-203ENST00000484537 PBRM1Q86U86 1689 aa24.57■■□□□ 1.52
ATAD3C-203ENST00000484537 GRIN2BQ13224 1484 aa24.57■■□□□ 1.52
ATAD3C-203ENST00000484537 CUX1P39880 1505 aa24.54■■□□□ 1.52
ATAD3C-203ENST00000484537 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
ATAD3C-203ENST00000484537 KIF13AQ9H1H9 1805 aa24.47■■□□□ 1.51
ATAD3C-203ENST00000484537 CEP170Q5SW79 1584 aa24.36■■□□□ 1.49
ATAD3C-203ENST00000484537 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
ATAD3C-203ENST00000484537 GRIN2AQ12879 1464 aa24.29■■□□□ 1.48
ATAD3C-203ENST00000484537 ILDR1Q86SU0 546 aaPredicted RBP24.27■■□□□ 1.48
ATAD3C-203ENST00000484537 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
ATAD3C-203ENST00000484537 SHROOM2Q13796 1616 aa24.24■■□□□ 1.47
ATAD3C-203ENST00000484537 ADAMTS12P58397 1594 aa24.23■■□□□ 1.47
ATAD3C-203ENST00000484537 NUP160Q12769 1436 aa24.2■■□□□ 1.46
ATAD3C-203ENST00000484537 KDM4FA0A1W2PPD8 638 aa24.2■■□□□ 1.46
ATAD3C-203ENST00000484537 FAM69CQ0P6D2 419 aa24.13■■□□□ 1.45
ATAD3C-203ENST00000484537 TSPOAP1O95153 1857 aa24.11■■□□□ 1.45
ATAD3C-203ENST00000484537 PRG4Q92954 1404 aaPredicted RBP24.09■■□□□ 1.45
ATAD3C-203ENST00000484537 DIP2BQ9P265 1576 aa24.07■■□□□ 1.44
ATAD3C-203ENST00000484537 ABCC10Q5T3U5 1492 aa24.07■■□□□ 1.44
ATAD3C-203ENST00000484537 KDM6BO15054 1643 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms