RNA–Protein interactions for RNA: ENST00000484438.1

EEFSEC-204, Transcript of eukaryotic elongation factor, selenocysteine-tRNA specific, humanhuman

TSL 3

Gene EEFSEC, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEFSEC-204ENST00000484438 NISCHQ9Y2I1 1504 aa40.32■■■■■ 4.04
EEFSEC-204ENST00000484438 CCDC180Q9P1Z9 1646 aa36.19■■■■□ 3.38
EEFSEC-204ENST00000484438 ABCC9O60706 1549 aa36.06■■■■□ 3.36
EEFSEC-204ENST00000484438 RB1CC1Q8TDY2 1594 aa34.34■■■■□ 3.09
EEFSEC-204ENST00000484438 NACADO15069 1562 aa34.11■■■■□ 3.05
EEFSEC-204ENST00000484438 DCAF8L2P0C7V8 631 aa33.92■■■■□ 3.02
EEFSEC-204ENST00000484438 UNC13AQ9UPW8 1703 aa33.79■■■■□ 3
EEFSEC-204ENST00000484438 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
EEFSEC-204ENST00000484438 MYO15BQ96JP2 1530 aa33.62■■■□□ 2.97
EEFSEC-204ENST00000484438 PABPN1Q86U42 306 aaKnown RBP eCLIP33.55■■■□□ 2.96
EEFSEC-204ENST00000484438 ZCCHC6Q5VYS8 1495 aaKnown RBP33.45■■■□□ 2.95
EEFSEC-204ENST00000484438 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
EEFSEC-204ENST00000484438 DCAF1Q9Y4B6 1507 aa33.27■■■□□ 2.92
EEFSEC-204ENST00000484438 SCRIBQ14160 1630 aa33.02■■■□□ 2.88
EEFSEC-204ENST00000484438 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
EEFSEC-204ENST00000484438 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
EEFSEC-204ENST00000484438 EIF4G1Q04637 1599 aaKnown RBP32.54■■■□□ 2.8
EEFSEC-204ENST00000484438 CECR2Q9BXF3 1484 aa32.42■■■□□ 2.78
EEFSEC-204ENST00000484438 SMARCA4P51532 1647 aa31.49■■■□□ 2.63
EEFSEC-204ENST00000484438 NCAPD3P42695 1498 aa31.46■■■□□ 2.63
EEFSEC-204ENST00000484438 ATAD2BQ9ULI0 1458 aa31.42■■■□□ 2.62
EEFSEC-204ENST00000484438 SMARCA2P51531 1590 aa31.32■■■□□ 2.6
EEFSEC-204ENST00000484438 HMGXB3Q12766 1538 aa31.28■■■□□ 2.6
EEFSEC-204ENST00000484438 BAZ1AQ9NRL2 1556 aaPredicted RBP31.27■■■□□ 2.6
EEFSEC-204ENST00000484438 PEG3Q9GZU2 1588 aa31.13■■■□□ 2.57
EEFSEC-204ENST00000484438 BAZ1BQ9UIG0 1483 aaKnown RBP31.12■■■□□ 2.57
EEFSEC-204ENST00000484438 MROH2BQ7Z745 1585 aa31.12■■■□□ 2.57
EEFSEC-204ENST00000484438 ERCC6Q03468 1493 aa31.06■■■□□ 2.56
EEFSEC-204ENST00000484438 NESP48681 1621 aa31.05■■■□□ 2.56
EEFSEC-204ENST00000484438 CUX2O14529 1486 aa30.95■■■□□ 2.55
EEFSEC-204ENST00000484438 WIZO95785 1651 aa30.81■■■□□ 2.52
EEFSEC-204ENST00000484438 DNAJC5Q9H3Z4 198 aa30.79■■■□□ 2.52
EEFSEC-204ENST00000484438 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
EEFSEC-204ENST00000484438 THOC2Q8NI27 1593 aaKnown RBP30.74■■■□□ 2.51
EEFSEC-204ENST00000484438 KIF21AQ7Z4S6 1674 aa30.74■■■□□ 2.51
EEFSEC-204ENST00000484438 PDS5BQ9NTI5 1447 aa30.51■■■□□ 2.47
EEFSEC-204ENST00000484438 CADPSQ9ULU8 1353 aa30.49■■■□□ 2.47
EEFSEC-204ENST00000484438 RSF1Q96T23 1441 aaPredicted RBP30.45■■■□□ 2.46
EEFSEC-204ENST00000484438 TOP2AP11388 1531 aaKnown RBP30.34■■■□□ 2.45
EEFSEC-204ENST00000484438 MRC2Q9UBG0 1479 aa30.32■■■□□ 2.44
EEFSEC-204ENST00000484438 WDR62O43379 1518 aa30.27■■■□□ 2.44
EEFSEC-204ENST00000484438 CEP164Q9UPV0 1460 aa30.22■■■□□ 2.43
EEFSEC-204ENST00000484438 CFTRP13569 1480 aa30.2■■■□□ 2.43
EEFSEC-204ENST00000484438 FANCD2Q9BXW9 1451 aa30.19■■■□□ 2.42
EEFSEC-204ENST00000484438 PRDM2Q13029 1718 aa30.1■■■□□ 2.41
EEFSEC-204ENST00000484438 URB2Q14146 1524 aaKnown RBP29.99■■■□□ 2.39
EEFSEC-204ENST00000484438 CCDC88BA6NC98 1476 aa29.99■■■□□ 2.39
EEFSEC-204ENST00000484438 TOPBP1Q92547 1522 aa29.66■■■□□ 2.34
EEFSEC-204ENST00000484438 ZNF608Q9ULD9 1512 aaPredicted RBP29.61■■■□□ 2.33
EEFSEC-204ENST00000484438 IFT140Q96RY7 1462 aa29.58■■■□□ 2.33
EEFSEC-204ENST00000484438 DNMBPQ6XZF7 1577 aa29.57■■■□□ 2.32
EEFSEC-204ENST00000484438 TRIM41Q8WV44 630 aa29.54■■■□□ 2.32
EEFSEC-204ENST00000484438 ABCC8Q09428 1581 aa29.51■■■□□ 2.31
EEFSEC-204ENST00000484438 OSCARQ8IYS5 282 aa29.5■■■□□ 2.31
EEFSEC-204ENST00000484438 EIF4G3O43432 1585 aaKnown RBP29.48■■■□□ 2.31
EEFSEC-204ENST00000484438 TARBP1Q13395 1621 aaKnown RBP29.45■■■□□ 2.3
EEFSEC-204ENST00000484438 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
EEFSEC-204ENST00000484438 CHD1O14646 1710 aa29.32■■■□□ 2.28
EEFSEC-204ENST00000484438 AQRO60306 1485 aaKnown RBP eCLIP29.32■■■□□ 2.287e-15■■■■■ 75.7
EEFSEC-204ENST00000484438 RIMBP3CA6NJZ7 1639 aa29.29■■■□□ 2.28
EEFSEC-204ENST00000484438 RIMBP3BA6NNM3 1639 aa29.29■■■□□ 2.28
EEFSEC-204ENST00000484438 RIMBP3Q9UFD9 1639 aa29.29■■■□□ 2.28
EEFSEC-204ENST00000484438 RAD54L2Q9Y4B4 1467 aa29.28■■■□□ 2.28
EEFSEC-204ENST00000484438 CUX1P39880 1505 aa29.23■■■□□ 2.27
EEFSEC-204ENST00000484438 FGD5Q6ZNL6 1462 aa29.21■■■□□ 2.27
EEFSEC-204ENST00000484438 SOGA1O94964 1423 aa29.18■■■□□ 2.26
EEFSEC-204ENST00000484438 SUPT5HO00267 1087 aaKnown RBP29.17■■■□□ 2.26
EEFSEC-204ENST00000484438 ARHGEF11O15085 1522 aa29.15■■■□□ 2.26
EEFSEC-204ENST00000484438 TDRD9Q8NDG6 1382 aaKnown RBP29.13■■■□□ 2.25
EEFSEC-204ENST00000484438 WDR97A6NE52 1622 aa29.1■■■□□ 2.25
EEFSEC-204ENST00000484438 FBLN2P98095 1184 aa29.04■■■□□ 2.24
EEFSEC-204ENST00000484438 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
EEFSEC-204ENST00000484438 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
EEFSEC-204ENST00000484438 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
EEFSEC-204ENST00000484438 MAGI1Q96QZ7 1491 aaPredicted RBP28.91■■■□□ 2.22
EEFSEC-204ENST00000484438 ARAP1Q96P48 1450 aa28.89■■■□□ 2.22
EEFSEC-204ENST00000484438 CLASP1Q7Z460 1538 aa28.89■■■□□ 2.21
EEFSEC-204ENST00000484438 ABCA5Q8WWZ7 1642 aa28.87■■■□□ 2.21
EEFSEC-204ENST00000484438 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
EEFSEC-204ENST00000484438 CYB5RLQ6IPT4 315 aa28.85■■■□□ 2.21
EEFSEC-204ENST00000484438 ABCA10Q8WWZ4 1543 aa28.84■■■□□ 2.21
EEFSEC-204ENST00000484438 SYNJ1O43426 1573 aa28.83■■■□□ 2.21
EEFSEC-204ENST00000484438 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
EEFSEC-204ENST00000484438 SYNJ2O15056 1496 aa28.82■■■□□ 2.2
EEFSEC-204ENST00000484438 CHMP7Q8WUX9 453 aaPredicted RBP28.81■■■□□ 2.2
EEFSEC-204ENST00000484438 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
EEFSEC-204ENST00000484438 WRNQ14191 1432 aaPredicted RBP eCLIP28.7■■■□□ 2.19
EEFSEC-204ENST00000484438 ADAMTS12P58397 1594 aa28.64■■■□□ 2.18
EEFSEC-204ENST00000484438 GRIN2AQ12879 1464 aa28.59■■■□□ 2.17
EEFSEC-204ENST00000484438 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
EEFSEC-204ENST00000484438 ERCC6L2Q5T890 1561 aa28.51■■■□□ 2.15
EEFSEC-204ENST00000484438 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
EEFSEC-204ENST00000484438 TRHP20396 242 aaPredicted RBP28.48■■■□□ 2.15
EEFSEC-204ENST00000484438 NUP160Q12769 1436 aa28.47■■■□□ 2.15
EEFSEC-204ENST00000484438 FHAD1B1AJZ9 1412 aa28.45■■■□□ 2.15
EEFSEC-204ENST00000484438 SHROOM2Q13796 1616 aa28.41■■■□□ 2.14
EEFSEC-204ENST00000484438 RUSC2Q8N2Y8 1516 aa28.25■■■□□ 2.11
EEFSEC-204ENST00000484438 PRG4Q92954 1404 aaPredicted RBP28.17■■■□□ 2.1
EEFSEC-204ENST00000484438 CUL7Q14999 1698 aa28.14■■■□□ 2.1
EEFSEC-204ENST00000484438 KIF27Q86VH2 1401 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms