RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 NISCHQ9Y2I1 1504 aa54.04■■■■■ 6.24
CNTNAP3B-208ENST00000484254 CCDC180Q9P1Z9 1646 aa48.1■■■■■ 5.29
CNTNAP3B-208ENST00000484254 ABCC9O60706 1549 aa47.17■■■■■ 5.14
CNTNAP3B-208ENST00000484254 RB1CC1Q8TDY2 1594 aa45.33■■■■■ 4.85
CNTNAP3B-208ENST00000484254 NACADO15069 1562 aa45.26■■■■■ 4.84
CNTNAP3B-208ENST00000484254 DCAF8L2P0C7V8 631 aa45.18■■■■■ 4.82
CNTNAP3B-208ENST00000484254 ZCCHC6Q5VYS8 1495 aaKnown RBP44.98■■■■■ 4.79
CNTNAP3B-208ENST00000484254 MYO15BQ96JP2 1530 aa44.97■■■■■ 4.79
CNTNAP3B-208ENST00000484254 DCAF1Q9Y4B6 1507 aa44.72■■■■■ 4.75
CNTNAP3B-208ENST00000484254 UNC13AQ9UPW8 1703 aa44.3■■■■■ 4.68
CNTNAP3B-208ENST00000484254 PABPN1Q86U42 306 aaKnown RBP eCLIP44.06■■■■■ 4.64
CNTNAP3B-208ENST00000484254 BICRAQ9NZM4 1560 aa43.97■■■■■ 4.63
CNTNAP3B-208ENST00000484254 SCRIBQ14160 1630 aa43.86■■■■■ 4.61
CNTNAP3B-208ENST00000484254 SHROOM4Q9ULL8 1493 aa43.51■■■■■ 4.56
CNTNAP3B-208ENST00000484254 DNAJC5BQ9UF47 199 aa43.43■■■■■ 4.54
CNTNAP3B-208ENST00000484254 EIF4G1Q04637 1599 aaKnown RBP42.82■■■■■ 4.44
CNTNAP3B-208ENST00000484254 CC2D2AQ9P2K1 1620 aa42.67■■■■■ 4.42
CNTNAP3B-208ENST00000484254 CECR2Q9BXF3 1484 aa42.41■■■■■ 4.38
CNTNAP3B-208ENST00000484254 SMARCA4P51532 1647 aa41.95■■■■■ 4.31
CNTNAP3B-208ENST00000484254 BAZ1AQ9NRL2 1556 aaPredicted RBP41.89■■■■■ 4.3
CNTNAP3B-208ENST00000484254 NCAPD3P42695 1498 aa41.78■■■■■ 4.28
CNTNAP3B-208ENST00000484254 ATAD2BQ9ULI0 1458 aa41.77■■■■■ 4.28
CNTNAP3B-208ENST00000484254 SMARCA2P51531 1590 aa41.71■■■■■ 4.27
CNTNAP3B-208ENST00000484254 MROH2BQ7Z745 1585 aa41.64■■■■■ 4.26
CNTNAP3B-208ENST00000484254 PEG3Q9GZU2 1588 aa41.56■■■■■ 4.24
CNTNAP3B-208ENST00000484254 HMGXB3Q12766 1538 aa41.54■■■■■ 4.24
CNTNAP3B-208ENST00000484254 BAZ1BQ9UIG0 1483 aaKnown RBP41.41■■■■■ 4.22
CNTNAP3B-208ENST00000484254 WIZO95785 1651 aa41.18■■■■■ 4.18
CNTNAP3B-208ENST00000484254 RSF1Q96T23 1441 aaPredicted RBP41.13■■■■■ 4.17
CNTNAP3B-208ENST00000484254 NESP48681 1621 aa40.78■■■■■ 4.12
CNTNAP3B-208ENST00000484254 TOP2AP11388 1531 aaKnown RBP40.75■■■■■ 4.11
CNTNAP3B-208ENST00000484254 LAMC3Q9Y6N6 1575 aa40.68■■■■■ 4.1
CNTNAP3B-208ENST00000484254 ERCC6Q03468 1493 aa40.66■■■■■ 4.1
CNTNAP3B-208ENST00000484254 CADPSQ9ULU8 1353 aa40.55■■■■■ 4.08
CNTNAP3B-208ENST00000484254 PDS5BQ9NTI5 1447 aa40.42■■■■■ 4.06
CNTNAP3B-208ENST00000484254 CUX2O14529 1486 aa40.3■■■■■ 4.04
CNTNAP3B-208ENST00000484254 KIF21AQ7Z4S6 1674 aa40.29■■■■■ 4.04
CNTNAP3B-208ENST00000484254 CFTRP13569 1480 aa40.28■■■■■ 4.04
CNTNAP3B-208ENST00000484254 CCDC88BA6NC98 1476 aa40.27■■■■■ 4.04
CNTNAP3B-208ENST00000484254 THOC2Q8NI27 1593 aaKnown RBP40.19■■■■■ 4.02
CNTNAP3B-208ENST00000484254 FANCD2Q9BXW9 1451 aa40.07■■■■■ 4
CNTNAP3B-208ENST00000484254 CEP164Q9UPV0 1460 aa40.02■■■■■ 4
CNTNAP3B-208ENST00000484254 MRC2Q9UBG0 1479 aa40■■■■□ 3.99
CNTNAP3B-208ENST00000484254 SUPT5HO00267 1087 aaKnown RBP39.98■■■■□ 3.99
CNTNAP3B-208ENST00000484254 PRDM2Q13029 1718 aa39.94■■■■□ 3.98
CNTNAP3B-208ENST00000484254 WDR62O43379 1518 aa39.88■■■■□ 3.97
CNTNAP3B-208ENST00000484254 URB2Q14146 1524 aaKnown RBP39.68■■■■□ 3.94
CNTNAP3B-208ENST00000484254 ABCC8Q09428 1581 aa39.42■■■■□ 3.9
CNTNAP3B-208ENST00000484254 TOPBP1Q92547 1522 aa39.42■■■■□ 3.9
CNTNAP3B-208ENST00000484254 DNMBPQ6XZF7 1577 aa39.36■■■■□ 3.89
CNTNAP3B-208ENST00000484254 DNAJC5Q9H3Z4 198 aa39.22■■■■□ 3.87
CNTNAP3B-208ENST00000484254 IFT140Q96RY7 1462 aa39.2■■■■□ 3.87
CNTNAP3B-208ENST00000484254 POLA1P09884 1462 aaPredicted RBP39.07■■■■□ 3.85
CNTNAP3B-208ENST00000484254 CUX1P39880 1505 aa39.07■■■■□ 3.84
CNTNAP3B-208ENST00000484254 ZNF608Q9ULD9 1512 aaPredicted RBP39.03■■■■□ 3.84
CNTNAP3B-208ENST00000484254 TARBP1Q13395 1621 aaKnown RBP39■■■■□ 3.83
CNTNAP3B-208ENST00000484254 FGD5Q6ZNL6 1462 aa38.96■■■■□ 3.83
CNTNAP3B-208ENST00000484254 SOGA1O94964 1423 aa38.92■■■■□ 3.82
CNTNAP3B-208ENST00000484254 RAD54L2Q9Y4B4 1467 aa38.91■■■■□ 3.82
CNTNAP3B-208ENST00000484254 EIF4G3O43432 1585 aaKnown RBP38.87■■■■□ 3.81
CNTNAP3B-208ENST00000484254 AQRO60306 1485 aaKnown RBP eCLIP38.8■■■■□ 3.8
CNTNAP3B-208ENST00000484254 WRNQ14191 1432 aaPredicted RBP eCLIP38.78■■■■□ 3.8
CNTNAP3B-208ENST00000484254 TDRD9Q8NDG6 1382 aaKnown RBP38.71■■■■□ 3.79
CNTNAP3B-208ENST00000484254 TOP2BQ02880 1626 aa38.71■■■■□ 3.79
CNTNAP3B-208ENST00000484254 BIVM-ERCC5R4GMW8 1640 aa38.71■■■■□ 3.79
CNTNAP3B-208ENST00000484254 WDR97A6NE52 1622 aa38.69■■■■□ 3.78
CNTNAP3B-208ENST00000484254 SYNJ1O43426 1573 aa38.68■■■■□ 3.78
CNTNAP3B-208ENST00000484254 OSCARQ8IYS5 282 aa38.62■■■■□ 3.77
CNTNAP3B-208ENST00000484254 ABCA10Q8WWZ4 1543 aa38.58■■■■□ 3.77
CNTNAP3B-208ENST00000484254 GRIN2BQ13224 1484 aa38.47■■■■□ 3.75
CNTNAP3B-208ENST00000484254 GAPVD1Q14C86 1478 aa38.47■■■■□ 3.75
CNTNAP3B-208ENST00000484254 SNAPC4Q5SXM2 1469 aa38.43■■■■□ 3.74
CNTNAP3B-208ENST00000484254 ABCA5Q8WWZ7 1642 aa38.43■■■■□ 3.74
CNTNAP3B-208ENST00000484254 CHD1O14646 1710 aa38.39■■■■□ 3.74
CNTNAP3B-208ENST00000484254 MAGI1Q96QZ7 1491 aaPredicted RBP38.39■■■■□ 3.74
CNTNAP3B-208ENST00000484254 PBRM1Q86U86 1689 aa38.37■■■■□ 3.73
CNTNAP3B-208ENST00000484254 FBLN2P98095 1184 aa38.35■■■■□ 3.73
CNTNAP3B-208ENST00000484254 SYNJ2O15056 1496 aa38.24■■■■□ 3.71
CNTNAP3B-208ENST00000484254 CHMP7Q8WUX9 453 aaPredicted RBP38.24■■■■□ 3.71
CNTNAP3B-208ENST00000484254 ERICH3Q5RHP9 1530 aa38.12■■■■□ 3.69
CNTNAP3B-208ENST00000484254 ADAMTS12P58397 1594 aa38.07■■■■□ 3.69
CNTNAP3B-208ENST00000484254 FHAD1B1AJZ9 1412 aa38.02■■■■□ 3.68
CNTNAP3B-208ENST00000484254 CLASP1Q7Z460 1538 aa38■■■■□ 3.67
CNTNAP3B-208ENST00000484254 RIMBP3CA6NJZ7 1639 aa37.99■■■■□ 3.67
CNTNAP3B-208ENST00000484254 RIMBP3BA6NNM3 1639 aa37.99■■■■□ 3.67
CNTNAP3B-208ENST00000484254 RIMBP3Q9UFD9 1639 aa37.99■■■■□ 3.67
CNTNAP3B-208ENST00000484254 GRIN2AQ12879 1464 aa37.98■■■■□ 3.67
CNTNAP3B-208ENST00000484254 KIF27Q86VH2 1401 aa37.98■■■■□ 3.67
CNTNAP3B-208ENST00000484254 ARHGEF11O15085 1522 aa37.97■■■■□ 3.67
CNTNAP3B-208ENST00000484254 IGF1RP08069 1367 aa37.86■■■■□ 3.65
CNTNAP3B-208ENST00000484254 TRIM41Q8WV44 630 aa37.85■■■■□ 3.65
CNTNAP3B-208ENST00000484254 NUP160Q12769 1436 aa37.82■■■■□ 3.64
CNTNAP3B-208ENST00000484254 CEP170Q5SW79 1584 aa37.8■■■■□ 3.64
CNTNAP3B-208ENST00000484254 CUL7Q14999 1698 aa37.74■■■■□ 3.63
CNTNAP3B-208ENST00000484254 ARAP1Q96P48 1450 aa37.66■■■■□ 3.62
CNTNAP3B-208ENST00000484254 CYB5RLQ6IPT4 315 aa37.63■■■■□ 3.61
CNTNAP3B-208ENST00000484254 CARMIL1Q5VZK9 1371 aa37.62■■■■□ 3.61
CNTNAP3B-208ENST00000484254 RUSC2Q8N2Y8 1516 aa37.6■■■■□ 3.61
CNTNAP3B-208ENST00000484254 SHROOM2Q13796 1616 aa37.55■■■■□ 3.6
CNTNAP3B-208ENST00000484254 ERCC6L2Q5T890 1561 aa37.46■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms