RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 NISCHQ9Y2I1 1504 aa32.7■■■□□ 2.83
DNMT3A-213ENST00000484184 ABCC9O60706 1549 aa29.86■■■□□ 2.37
DNMT3A-213ENST00000484184 CCDC180Q9P1Z9 1646 aa29.47■■■□□ 2.31
DNMT3A-213ENST00000484184 DNAJC5BQ9UF47 199 aa28.46■■■□□ 2.15
DNMT3A-213ENST00000484184 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
DNMT3A-213ENST00000484184 NACADO15069 1562 aa27.96■■■□□ 2.07
DNMT3A-213ENST00000484184 PABPN1Q86U42 306 aaKnown RBP eCLIP27.75■■■□□ 2.03
DNMT3A-213ENST00000484184 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
DNMT3A-213ENST00000484184 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.01
DNMT3A-213ENST00000484184 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
DNMT3A-213ENST00000484184 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
DNMT3A-213ENST00000484184 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
DNMT3A-213ENST00000484184 ZCCHC6Q5VYS8 1495 aaKnown RBP27.02■■□□□ 1.92
DNMT3A-213ENST00000484184 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
DNMT3A-213ENST00000484184 CC2D2AQ9P2K1 1620 aa26.96■■□□□ 1.91
DNMT3A-213ENST00000484184 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
DNMT3A-213ENST00000484184 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
DNMT3A-213ENST00000484184 EIF4G1Q04637 1599 aaKnown RBP26.81■■□□□ 1.88
DNMT3A-213ENST00000484184 DNAJC5Q9H3Z4 198 aa26.35■■□□□ 1.81
DNMT3A-213ENST00000484184 CUX2O14529 1486 aa25.88■■□□□ 1.73
DNMT3A-213ENST00000484184 NCAPD3P42695 1498 aa25.86■■□□□ 1.73
DNMT3A-213ENST00000484184 ERCC6Q03468 1493 aa25.75■■□□□ 1.71
DNMT3A-213ENST00000484184 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
DNMT3A-213ENST00000484184 HMGXB3Q12766 1538 aa25.6■■□□□ 1.69
DNMT3A-213ENST00000484184 SMARCA2P51531 1590 aa25.58■■□□□ 1.69
DNMT3A-213ENST00000484184 SMARCA4P51532 1647 aa25.58■■□□□ 1.69
DNMT3A-213ENST00000484184 NESP48681 1621 aa25.57■■□□□ 1.68
DNMT3A-213ENST00000484184 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
DNMT3A-213ENST00000484184 THOC2Q8NI27 1593 aaKnown RBP25.38■■□□□ 1.65
DNMT3A-213ENST00000484184 BAZ1AQ9NRL2 1556 aaPredicted RBP25.37■■□□□ 1.65
DNMT3A-213ENST00000484184 PEG3Q9GZU2 1588 aa25.36■■□□□ 1.65
DNMT3A-213ENST00000484184 LAMC3Q9Y6N6 1575 aa25.29■■□□□ 1.64
DNMT3A-213ENST00000484184 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
DNMT3A-213ENST00000484184 KIF21AQ7Z4S6 1674 aa25.2■■□□□ 1.62
DNMT3A-213ENST00000484184 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
DNMT3A-213ENST00000484184 CADPSQ9ULU8 1353 aa25.04■■□□□ 1.6
DNMT3A-213ENST00000484184 MRC2Q9UBG0 1479 aa24.96■■□□□ 1.59
DNMT3A-213ENST00000484184 TRIM41Q8WV44 630 aa24.95■■□□□ 1.58
DNMT3A-213ENST00000484184 WDR62O43379 1518 aa24.94■■□□□ 1.58
DNMT3A-213ENST00000484184 WIZO95785 1651 aa24.86■■□□□ 1.57
DNMT3A-213ENST00000484184 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
DNMT3A-213ENST00000484184 FANCD2Q9BXW9 1451 aa24.73■■□□□ 1.55
DNMT3A-213ENST00000484184 CFTRP13569 1480 aa24.69■■□□□ 1.54
DNMT3A-213ENST00000484184 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
DNMT3A-213ENST00000484184 URB2Q14146 1524 aaKnown RBP24.6■■□□□ 1.53
DNMT3A-213ENST00000484184 RSF1Q96T23 1441 aaPredicted RBP24.54■■□□□ 1.52
DNMT3A-213ENST00000484184 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
DNMT3A-213ENST00000484184 RIMBP3CA6NJZ7 1639 aa24.37■■□□□ 1.49
DNMT3A-213ENST00000484184 RIMBP3BA6NNM3 1639 aa24.37■■□□□ 1.49
DNMT3A-213ENST00000484184 RIMBP3Q9UFD9 1639 aa24.37■■□□□ 1.49
DNMT3A-213ENST00000484184 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
DNMT3A-213ENST00000484184 PRDM2Q13029 1718 aa24.34■■□□□ 1.49
DNMT3A-213ENST00000484184 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
DNMT3A-213ENST00000484184 ARHGEF11O15085 1522 aa24.26■■□□□ 1.47
DNMT3A-213ENST00000484184 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
DNMT3A-213ENST00000484184 TOPBP1Q92547 1522 aa24.24■■□□□ 1.47
DNMT3A-213ENST00000484184 EIF4G3O43432 1585 aaKnown RBP24.16■■□□□ 1.46
DNMT3A-213ENST00000484184 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
DNMT3A-213ENST00000484184 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
DNMT3A-213ENST00000484184 CYB5RLQ6IPT4 315 aa24.09■■□□□ 1.45
DNMT3A-213ENST00000484184 TARBP1Q13395 1621 aaKnown RBP24.08■■□□□ 1.45
DNMT3A-213ENST00000484184 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.44
DNMT3A-213ENST00000484184 CHD1O14646 1710 aa24.04■■□□□ 1.44
DNMT3A-213ENST00000484184 ARAP1Q96P48 1450 aa24.01■■□□□ 1.43
DNMT3A-213ENST00000484184 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
DNMT3A-213ENST00000484184 FBLN2P98095 1184 aa23.91■■□□□ 1.42
DNMT3A-213ENST00000484184 RAD54L2Q9Y4B4 1467 aa23.89■■□□□ 1.42
DNMT3A-213ENST00000484184 TRHP20396 242 aaPredicted RBP23.88■■□□□ 1.41
DNMT3A-213ENST00000484184 TDRD9Q8NDG6 1382 aaKnown RBP23.85■■□□□ 1.41
DNMT3A-213ENST00000484184 SOGA1O94964 1423 aa23.84■■□□□ 1.41
DNMT3A-213ENST00000484184 CLASP1Q7Z460 1538 aa23.8■■□□□ 1.4
DNMT3A-213ENST00000484184 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
DNMT3A-213ENST00000484184 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
DNMT3A-213ENST00000484184 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
DNMT3A-213ENST00000484184 MAGI1Q96QZ7 1491 aaPredicted RBP23.71■■□□□ 1.39
DNMT3A-213ENST00000484184 CUX1P39880 1505 aa23.69■■□□□ 1.38
DNMT3A-213ENST00000484184 CHMP7Q8WUX9 453 aaPredicted RBP23.69■■□□□ 1.38
DNMT3A-213ENST00000484184 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
DNMT3A-213ENST00000484184 GRIN2BQ13224 1484 aa23.67■■□□□ 1.38
DNMT3A-213ENST00000484184 SYNJ2O15056 1496 aa23.64■■□□□ 1.38
DNMT3A-213ENST00000484184 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
DNMT3A-213ENST00000484184 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
DNMT3A-213ENST00000484184 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
DNMT3A-213ENST00000484184 ABCA5Q8WWZ7 1642 aa23.48■■□□□ 1.35
DNMT3A-213ENST00000484184 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
DNMT3A-213ENST00000484184 ERCC6L2Q5T890 1561 aa23.42■■□□□ 1.34
DNMT3A-213ENST00000484184 GRIN2AQ12879 1464 aa23.37■■□□□ 1.33
DNMT3A-213ENST00000484184 NUP160Q12769 1436 aa23.34■■□□□ 1.33
DNMT3A-213ENST00000484184 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
DNMT3A-213ENST00000484184 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
DNMT3A-213ENST00000484184 SHROOM2Q13796 1616 aa23.27■■□□□ 1.32
DNMT3A-213ENST00000484184 WRNQ14191 1432 aaPredicted RBP eCLIP23.26■■□□□ 1.31
DNMT3A-213ENST00000484184 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
DNMT3A-213ENST00000484184 BIVM-ERCC5R4GMW8 1640 aa23.19■■□□□ 1.3
DNMT3A-213ENST00000484184 TOP2BQ02880 1626 aa23.19■■□□□ 1.3
DNMT3A-213ENST00000484184 KIF13AQ9H1H9 1805 aa23.17■■□□□ 1.3
DNMT3A-213ENST00000484184 ERICH3Q5RHP9 1530 aa23.15■■□□□ 1.3
DNMT3A-213ENST00000484184 PRG4Q92954 1404 aaPredicted RBP23.11■■□□□ 1.29
DNMT3A-213ENST00000484184 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
DNMT3A-213ENST00000484184 JPH4Q96JJ6 628 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms