RNA–Protein interactions for RNA: ENST00000484063.6

PRDM2-207, Transcript of PR/SET domain 2, humanhuman

TSL 5

Gene PRDM2, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-207ENST00000484063 NISCHQ9Y2I1 1504 aa49.85■■■■■ 5.57
PRDM2-207ENST00000484063 CCDC180Q9P1Z9 1646 aa44.5■■■■■ 4.71
PRDM2-207ENST00000484063 ABCC9O60706 1549 aa43.81■■■■■ 4.6
PRDM2-207ENST00000484063 RB1CC1Q8TDY2 1594 aa42.05■■■■■ 4.32
PRDM2-207ENST00000484063 NACADO15069 1562 aa41.93■■■■■ 4.3
PRDM2-207ENST00000484063 DCAF8L2P0C7V8 631 aa41.83■■■■■ 4.29
PRDM2-207ENST00000484063 MYO15BQ96JP2 1530 aa41.58■■■■■ 4.25
PRDM2-207ENST00000484063 ZCCHC6Q5VYS8 1495 aaKnown RBP41.45■■■■■ 4.23
PRDM2-207ENST00000484063 DCAF1Q9Y4B6 1507 aa41.26■■■■■ 4.2
PRDM2-207ENST00000484063 UNC13AQ9UPW8 1703 aa41.04■■■■■ 4.16
PRDM2-207ENST00000484063 PABPN1Q86U42 306 aaKnown RBP eCLIP40.89■■■■■ 4.14
PRDM2-207ENST00000484063 BICRAQ9NZM4 1560 aa40.73■■■■■ 4.11
PRDM2-207ENST00000484063 SCRIBQ14160 1630 aa40.53■■■■■ 4.08
PRDM2-207ENST00000484063 DNAJC5BQ9UF47 199 aa40.48■■■■■ 4.07
PRDM2-207ENST00000484063 SHROOM4Q9ULL8 1493 aa40.36■■■■■ 4.05
PRDM2-207ENST00000484063 EIF4G1Q04637 1599 aaKnown RBP39.71■■■■□ 3.95
PRDM2-207ENST00000484063 CC2D2AQ9P2K1 1620 aa39.62■■■■□ 3.93
PRDM2-207ENST00000484063 CECR2Q9BXF3 1484 aa39.43■■■■□ 3.9
PRDM2-207ENST00000484063 SMARCA4P51532 1647 aa38.75■■■■□ 3.79
PRDM2-207ENST00000484063 BAZ1AQ9NRL2 1556 aaPredicted RBP38.69■■■■□ 3.78
PRDM2-207ENST00000484063 NCAPD3P42695 1498 aa38.68■■■■□ 3.78
PRDM2-207ENST00000484063 ATAD2BQ9ULI0 1458 aa38.62■■■■□ 3.77
PRDM2-207ENST00000484063 SMARCA2P51531 1590 aa38.61■■■■□ 3.77
PRDM2-207ENST00000484063 HMGXB3Q12766 1538 aa38.45■■■■□ 3.75
PRDM2-207ENST00000484063 MROH2BQ7Z745 1585 aa38.39■■■■□ 3.74
PRDM2-207ENST00000484063 PEG3Q9GZU2 1588 aa38.38■■■■□ 3.73
PRDM2-207ENST00000484063 BAZ1BQ9UIG0 1483 aaKnown RBP38.31■■■■□ 3.72
PRDM2-207ENST00000484063 WIZO95785 1651 aa37.97■■■■□ 3.67
PRDM2-207ENST00000484063 RSF1Q96T23 1441 aaPredicted RBP37.85■■■■□ 3.65
PRDM2-207ENST00000484063 ERCC6Q03468 1493 aa37.84■■■■□ 3.65
PRDM2-207ENST00000484063 NESP48681 1621 aa37.79■■■■□ 3.64
PRDM2-207ENST00000484063 LAMC3Q9Y6N6 1575 aa37.72■■■■□ 3.63
PRDM2-207ENST00000484063 CUX2O14529 1486 aa37.57■■■■□ 3.6
PRDM2-207ENST00000484063 TOP2AP11388 1531 aaKnown RBP37.56■■■■□ 3.6
PRDM2-207ENST00000484063 CADPSQ9ULU8 1353 aa37.54■■■■□ 3.6
PRDM2-207ENST00000484063 PDS5BQ9NTI5 1447 aa37.5■■■■□ 3.59
PRDM2-207ENST00000484063 KIF21AQ7Z4S6 1674 aa37.36■■■■□ 3.57
PRDM2-207ENST00000484063 THOC2Q8NI27 1593 aaKnown RBP37.3■■■■□ 3.56
PRDM2-207ENST00000484063 CFTRP13569 1480 aa37.23■■■■□ 3.55
PRDM2-207ENST00000484063 CCDC88BA6NC98 1476 aa37.12■■■■□ 3.53
PRDM2-207ENST00000484063 MRC2Q9UBG0 1479 aa37.1■■■■□ 3.53
PRDM2-207ENST00000484063 FANCD2Q9BXW9 1451 aa37.09■■■■□ 3.53
PRDM2-207ENST00000484063 CEP164Q9UPV0 1460 aa37.09■■■■□ 3.53
PRDM2-207ENST00000484063 WDR62O43379 1518 aa36.97■■■■□ 3.51
PRDM2-207ENST00000484063 PRDM2Q13029 1718 aa36.94■■■■□ 3.5
PRDM2-207ENST00000484063 DNAJC5Q9H3Z4 198 aa36.79■■■■□ 3.48
PRDM2-207ENST00000484063 URB2Q14146 1524 aaKnown RBP36.71■■■■□ 3.47
PRDM2-207ENST00000484063 SUPT5HO00267 1087 aaKnown RBP36.67■■■■□ 3.46
PRDM2-207ENST00000484063 ABCC8Q09428 1581 aa36.51■■■■□ 3.44
PRDM2-207ENST00000484063 TOPBP1Q92547 1522 aa36.46■■■■□ 3.43
PRDM2-207ENST00000484063 DNMBPQ6XZF7 1577 aa36.4■■■■□ 3.42
PRDM2-207ENST00000484063 IFT140Q96RY7 1462 aa36.34■■■■□ 3.41
PRDM2-207ENST00000484063 ZNF608Q9ULD9 1512 aaPredicted RBP36.14■■■■□ 3.38
PRDM2-207ENST00000484063 POLA1P09884 1462 aaPredicted RBP36.11■■■■□ 3.37
PRDM2-207ENST00000484063 TARBP1Q13395 1621 aaKnown RBP36.07■■■■□ 3.36
PRDM2-207ENST00000484063 CUX1P39880 1505 aa36.03■■■■□ 3.36
PRDM2-207ENST00000484063 EIF4G3O43432 1585 aaKnown RBP36■■■■□ 3.35
PRDM2-207ENST00000484063 SOGA1O94964 1423 aa36■■■■□ 3.35
PRDM2-207ENST00000484063 FGD5Q6ZNL6 1462 aa35.99■■■■□ 3.35
PRDM2-207ENST00000484063 OSCARQ8IYS5 282 aa35.98■■■■□ 3.35
PRDM2-207ENST00000484063 RAD54L2Q9Y4B4 1467 aa35.95■■■■□ 3.35
PRDM2-207ENST00000484063 AQRO60306 1485 aaKnown RBP eCLIP35.92■■■■□ 3.34
PRDM2-207ENST00000484063 WDR97A6NE52 1622 aa35.83■■■■□ 3.33
PRDM2-207ENST00000484063 TDRD9Q8NDG6 1382 aaKnown RBP35.8■■■■□ 3.32
PRDM2-207ENST00000484063 WRNQ14191 1432 aaPredicted RBP eCLIP35.73■■■■□ 3.31
PRDM2-207ENST00000484063 TOP2BQ02880 1626 aa35.67■■■■□ 3.3
PRDM2-207ENST00000484063 BIVM-ERCC5R4GMW8 1640 aa35.67■■■■□ 3.3
PRDM2-207ENST00000484063 ABCA10Q8WWZ4 1543 aa35.64■■■■□ 3.3
PRDM2-207ENST00000484063 CHD1O14646 1710 aa35.63■■■■□ 3.29
PRDM2-207ENST00000484063 GRIN2BQ13224 1484 aa35.61■■■■□ 3.29
PRDM2-207ENST00000484063 SYNJ1O43426 1573 aa35.6■■■■□ 3.29
PRDM2-207ENST00000484063 FBLN2P98095 1184 aa35.6■■■■□ 3.29
PRDM2-207ENST00000484063 SNAPC4Q5SXM2 1469 aa35.59■■■■□ 3.29
PRDM2-207ENST00000484063 GAPVD1Q14C86 1478 aa35.57■■■■□ 3.28
PRDM2-207ENST00000484063 MAGI1Q96QZ7 1491 aaPredicted RBP35.56■■■■□ 3.28
PRDM2-207ENST00000484063 PBRM1Q86U86 1689 aa35.5■■■■□ 3.27
PRDM2-207ENST00000484063 ABCA5Q8WWZ7 1642 aa35.5■■■■□ 3.27
PRDM2-207ENST00000484063 CHMP7Q8WUX9 453 aaPredicted RBP35.47■■■■□ 3.27
PRDM2-207ENST00000484063 TRIM41Q8WV44 630 aa35.42■■■■□ 3.26
PRDM2-207ENST00000484063 SYNJ2O15056 1496 aa35.41■■■■□ 3.26
PRDM2-207ENST00000484063 RIMBP3CA6NJZ7 1639 aa35.37■■■■□ 3.25
PRDM2-207ENST00000484063 RIMBP3BA6NNM3 1639 aa35.37■■■■□ 3.25
PRDM2-207ENST00000484063 RIMBP3Q9UFD9 1639 aa35.37■■■■□ 3.25
PRDM2-207ENST00000484063 ARHGEF11O15085 1522 aa35.32■■■■□ 3.25
PRDM2-207ENST00000484063 CLASP1Q7Z460 1538 aa35.22■■■■□ 3.23
PRDM2-207ENST00000484063 ERICH3Q5RHP9 1530 aa35.22■■■■□ 3.23
PRDM2-207ENST00000484063 ADAMTS12P58397 1594 aa35.19■■■■□ 3.22
PRDM2-207ENST00000484063 FHAD1B1AJZ9 1412 aa35.16■■■■□ 3.22
PRDM2-207ENST00000484063 GRIN2AQ12879 1464 aa35.14■■■■□ 3.22
PRDM2-207ENST00000484063 CYB5RLQ6IPT4 315 aa35.05■■■■□ 3.2
PRDM2-207ENST00000484063 KIF27Q86VH2 1401 aa35.03■■■■□ 3.2
PRDM2-207ENST00000484063 ARAP1Q96P48 1450 aa35.01■■■■□ 3.19
PRDM2-207ENST00000484063 NUP160Q12769 1436 aa34.99■■■■□ 3.19
PRDM2-207ENST00000484063 CEP170Q5SW79 1584 aa34.95■■■■□ 3.18
PRDM2-207ENST00000484063 IGF1RP08069 1367 aa34.89■■■■□ 3.18
PRDM2-207ENST00000484063 CUL7Q14999 1698 aa34.84■■■■□ 3.17
PRDM2-207ENST00000484063 SHROOM2Q13796 1616 aa34.77■■■■□ 3.16
PRDM2-207ENST00000484063 CARMIL1Q5VZK9 1371 aa34.71■■■■□ 3.15
PRDM2-207ENST00000484063 ERCC6L2Q5T890 1561 aa34.67■■■■□ 3.14
PRDM2-207ENST00000484063 JPH4Q96JJ6 628 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms