RNA–Protein interactions for RNA: ENST00000483773.1

FBXO28-203, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-203ENST00000483773 NISCHQ9Y2I1 1504 aa30.11■■■□□ 2.41
FBXO28-203ENST00000483773 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
FBXO28-203ENST00000483773 ABCC9O60706 1549 aa25.32■■□□□ 1.64
FBXO28-203ENST00000483773 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
FBXO28-203ENST00000483773 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
FBXO28-203ENST00000483773 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
FBXO28-203ENST00000483773 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
FBXO28-203ENST00000483773 NACADO15069 1562 aa24.86■■□□□ 1.57
FBXO28-203ENST00000483773 RB1CC1Q8TDY2 1594 aa24.72■■□□□ 1.55
FBXO28-203ENST00000483773 SCRIBQ14160 1630 aa24.13■■□□□ 1.45
FBXO28-203ENST00000483773 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
FBXO28-203ENST00000483773 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
FBXO28-203ENST00000483773 BICRAQ9NZM4 1560 aa23.84■■□□□ 1.41
FBXO28-203ENST00000483773 PABPN1Q86U42 306 aaKnown RBP eCLIP23.76■■□□□ 1.39
FBXO28-203ENST00000483773 BAZ1AQ9NRL2 1556 aaPredicted RBP23.33■■□□□ 1.33
FBXO28-203ENST00000483773 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
FBXO28-203ENST00000483773 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
FBXO28-203ENST00000483773 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
FBXO28-203ENST00000483773 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.3
FBXO28-203ENST00000483773 RSF1Q96T23 1441 aaPredicted RBP23.14■■□□□ 1.29
FBXO28-203ENST00000483773 SMARCA2P51531 1590 aa23.03■■□□□ 1.28
FBXO28-203ENST00000483773 PEG3Q9GZU2 1588 aa23.03■■□□□ 1.28
FBXO28-203ENST00000483773 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
FBXO28-203ENST00000483773 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
FBXO28-203ENST00000483773 CC2D2AQ9P2K1 1620 aa22.95■■□□□ 1.26
FBXO28-203ENST00000483773 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
FBXO28-203ENST00000483773 WIZO95785 1651 aa22.9■■□□□ 1.26
FBXO28-203ENST00000483773 HMGXB3Q12766 1538 aa22.84■■□□□ 1.25
FBXO28-203ENST00000483773 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
FBXO28-203ENST00000483773 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
FBXO28-203ENST00000483773 DNAJC5BQ9UF47 199 aa22.7■■□□□ 1.22
FBXO28-203ENST00000483773 CCDC88BA6NC98 1476 aa22.49■■□□□ 1.19
FBXO28-203ENST00000483773 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
FBXO28-203ENST00000483773 CFTRP13569 1480 aa22.25■■□□□ 1.15
FBXO28-203ENST00000483773 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
FBXO28-203ENST00000483773 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
FBXO28-203ENST00000483773 PRDM2Q13029 1718 aa22.08■■□□□ 1.12
FBXO28-203ENST00000483773 NESP48681 1621 aa22.04■■□□□ 1.12
FBXO28-203ENST00000483773 FANCD2Q9BXW9 1451 aa21.98■■□□□ 1.11
FBXO28-203ENST00000483773 CEP164Q9UPV0 1460 aa21.91■■□□□ 1.1
FBXO28-203ENST00000483773 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
FBXO28-203ENST00000483773 ERCC6Q03468 1493 aa21.85■■□□□ 1.09
FBXO28-203ENST00000483773 WRNQ14191 1432 aaPredicted RBP eCLIP21.83■■□□□ 1.09
FBXO28-203ENST00000483773 KIF21AQ7Z4S6 1674 aa21.8■■□□□ 1.08
FBXO28-203ENST00000483773 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
FBXO28-203ENST00000483773 MRC2Q9UBG0 1479 aa21.76■■□□□ 1.07
FBXO28-203ENST00000483773 TRIM41Q8WV44 630 aa21.75■■□□□ 1.07
FBXO28-203ENST00000483773 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
FBXO28-203ENST00000483773 TOP2BQ02880 1626 aa21.7■■□□□ 1.06
FBXO28-203ENST00000483773 CUX1P39880 1505 aa21.69■■□□□ 1.06
FBXO28-203ENST00000483773 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
FBXO28-203ENST00000483773 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
FBXO28-203ENST00000483773 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
FBXO28-203ENST00000483773 WDR62O43379 1518 aa21.65■■□□□ 1.06
FBXO28-203ENST00000483773 SYNJ1O43426 1573 aa21.64■■□□□ 1.05
FBXO28-203ENST00000483773 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
FBXO28-203ENST00000483773 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
FBXO28-203ENST00000483773 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
FBXO28-203ENST00000483773 SOGA1O94964 1423 aa21.5■■□□□ 1.03
FBXO28-203ENST00000483773 CUX2O14529 1486 aa21.47■■□□□ 1.03
FBXO28-203ENST00000483773 IFT140Q96RY7 1462 aa21.45■■□□□ 1.03
FBXO28-203ENST00000483773 ABCA10Q8WWZ4 1543 aa21.42■■□□□ 1.02
FBXO28-203ENST00000483773 EEA1Q15075 1411 aa21.41■■□□□ 1.02
FBXO28-203ENST00000483773 RAD54L2Q9Y4B4 1467 aa21.38■■□□□ 1.01
FBXO28-203ENST00000483773 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
FBXO28-203ENST00000483773 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
FBXO28-203ENST00000483773 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
FBXO28-203ENST00000483773 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
FBXO28-203ENST00000483773 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
FBXO28-203ENST00000483773 CSRNP3Q8WYN3 585 aa21.24■□□□□ 0.99
FBXO28-203ENST00000483773 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
FBXO28-203ENST00000483773 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
FBXO28-203ENST00000483773 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
FBXO28-203ENST00000483773 IGF1RP08069 1367 aa21.19■□□□□ 0.98
FBXO28-203ENST00000483773 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
FBXO28-203ENST00000483773 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
FBXO28-203ENST00000483773 AQRO60306 1485 aaKnown RBP eCLIP21.18■□□□□ 0.981e-6■□□□□ 8.5
FBXO28-203ENST00000483773 FAM9AQ8IZU1 332 aaPredicted RBP21.15■□□□□ 0.98
FBXO28-203ENST00000483773 EIF4G3O43432 1585 aaKnown RBP21.14■□□□□ 0.98
FBXO28-203ENST00000483773 CUL7Q14999 1698 aa21.09■□□□□ 0.97
FBXO28-203ENST00000483773 CARMIL1Q5VZK9 1371 aa21.09■□□□□ 0.97
FBXO28-203ENST00000483773 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
FBXO28-203ENST00000483773 MAGI1Q96QZ7 1491 aaPredicted RBP21.08■□□□□ 0.97
FBXO28-203ENST00000483773 PRXQ9BXM0 1461 aa21.07■□□□□ 0.96
FBXO28-203ENST00000483773 FHAD1B1AJZ9 1412 aa21.05■□□□□ 0.96
FBXO28-203ENST00000483773 KIF21BO75037 1637 aa21.03■□□□□ 0.96
FBXO28-203ENST00000483773 RAPGEF2Q9Y4G8 1499 aa21.02■□□□□ 0.96
FBXO28-203ENST00000483773 SNAPC4Q5SXM2 1469 aa21■□□□□ 0.95
FBXO28-203ENST00000483773 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
FBXO28-203ENST00000483773 SYNJ2O15056 1496 aa20.97■□□□□ 0.95
FBXO28-203ENST00000483773 GOLGA3Q08378 1498 aa20.97■□□□□ 0.95
FBXO28-203ENST00000483773 CHMP7Q8WUX9 453 aaPredicted RBP20.95■□□□□ 0.94
FBXO28-203ENST00000483773 UBTFP17480 764 aaKnown RBP20.89■□□□□ 0.93
FBXO28-203ENST00000483773 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
FBXO28-203ENST00000483773 FBLN2P98095 1184 aa20.86■□□□□ 0.93
FBXO28-203ENST00000483773 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
FBXO28-203ENST00000483773 LOC105371045A0A1W2PR82 267 aa20.84■□□□□ 0.93
FBXO28-203ENST00000483773 NUP160Q12769 1436 aa20.78■□□□□ 0.92
FBXO28-203ENST00000483773 KIAA0586Q9BVV6 1533 aa20.76■□□□□ 0.91
FBXO28-203ENST00000483773 CHD1O14646 1710 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms