RNA–Protein interactions for RNA: ENST00000483770.1

PABPC4-214, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-214ENST00000483770 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
PABPC4-214ENST00000483770 ABCC9O60706 1549 aa20.24■□□□□ 0.83
PABPC4-214ENST00000483770 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
PABPC4-214ENST00000483770 DCAF8L2P0C7V8 631 aa19.21■□□□□ 0.67
PABPC4-214ENST00000483770 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
PABPC4-214ENST00000483770 NACADO15069 1562 aa19.04■□□□□ 0.64
PABPC4-214ENST00000483770 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
PABPC4-214ENST00000483770 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
PABPC4-214ENST00000483770 UNC13AQ9UPW8 1703 aa18.89■□□□□ 0.61
PABPC4-214ENST00000483770 MYO15BQ96JP2 1530 aa18.72■□□□□ 0.59
PABPC4-214ENST00000483770 ZCCHC6Q5VYS8 1495 aaKnown RBP18.7■□□□□ 0.58
PABPC4-214ENST00000483770 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
PABPC4-214ENST00000483770 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
PABPC4-214ENST00000483770 SCRIBQ14160 1630 aa18.52■□□□□ 0.55
PABPC4-214ENST00000483770 CC2D2AQ9P2K1 1620 aa18.25■□□□□ 0.51
PABPC4-214ENST00000483770 SHROOM4Q9ULL8 1493 aa18.22■□□□□ 0.51
PABPC4-214ENST00000483770 EIF4G1Q04637 1599 aaKnown RBP18.19■□□□□ 0.5
PABPC4-214ENST00000483770 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
PABPC4-214ENST00000483770 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
PABPC4-214ENST00000483770 ATAD2BQ9ULI0 1458 aa17.59■□□□□ 0.41
PABPC4-214ENST00000483770 NCAPD3P42695 1498 aa17.58■□□□□ 0.41
PABPC4-214ENST00000483770 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
PABPC4-214ENST00000483770 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
PABPC4-214ENST00000483770 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.39
PABPC4-214ENST00000483770 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
PABPC4-214ENST00000483770 NESP48681 1621 aa17.43■□□□□ 0.38
PABPC4-214ENST00000483770 BAZ1BQ9UIG0 1483 aaKnown RBP17.43■□□□□ 0.38
PABPC4-214ENST00000483770 ERCC6Q03468 1493 aa17.41■□□□□ 0.38
PABPC4-214ENST00000483770 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
PABPC4-214ENST00000483770 WIZO95785 1651 aa17.29■□□□□ 0.36
PABPC4-214ENST00000483770 CUX2O14529 1486 aa17.26■□□□□ 0.35
PABPC4-214ENST00000483770 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
PABPC4-214ENST00000483770 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
PABPC4-214ENST00000483770 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
PABPC4-214ENST00000483770 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
PABPC4-214ENST00000483770 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
PABPC4-214ENST00000483770 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
PABPC4-214ENST00000483770 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.32
PABPC4-214ENST00000483770 TOP2AP11388 1531 aaKnown RBP16.97■□□□□ 0.31
PABPC4-214ENST00000483770 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
PABPC4-214ENST00000483770 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
PABPC4-214ENST00000483770 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
PABPC4-214ENST00000483770 CFTRP13569 1480 aa16.89■□□□□ 0.29
PABPC4-214ENST00000483770 WDR62O43379 1518 aa16.89■□□□□ 0.29
PABPC4-214ENST00000483770 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
PABPC4-214ENST00000483770 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
PABPC4-214ENST00000483770 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
PABPC4-214ENST00000483770 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
PABPC4-214ENST00000483770 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
PABPC4-214ENST00000483770 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
PABPC4-214ENST00000483770 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
PABPC4-214ENST00000483770 SUPT5HO00267 1087 aaKnown RBP16.55■□□□□ 0.24
PABPC4-214ENST00000483770 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
PABPC4-214ENST00000483770 DNMBPQ6XZF7 1577 aa16.53■□□□□ 0.24
PABPC4-214ENST00000483770 ABCC8Q09428 1581 aa16.49■□□□□ 0.23
PABPC4-214ENST00000483770 EIF4G3O43432 1585 aaKnown RBP16.48■□□□□ 0.23
PABPC4-214ENST00000483770 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.239e-7■■■■□ 24.4
PABPC4-214ENST00000483770 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
PABPC4-214ENST00000483770 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
PABPC4-214ENST00000483770 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
PABPC4-214ENST00000483770 CHD1O14646 1710 aa16.4■□□□□ 0.22
PABPC4-214ENST00000483770 FBLN2P98095 1184 aa16.4■□□□□ 0.22
PABPC4-214ENST00000483770 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
PABPC4-214ENST00000483770 SOGA1O94964 1423 aa16.39■□□□□ 0.21
PABPC4-214ENST00000483770 RIMBP3CA6NJZ7 1639 aa16.38■□□□□ 0.21
PABPC4-214ENST00000483770 RIMBP3BA6NNM3 1639 aa16.38■□□□□ 0.21
PABPC4-214ENST00000483770 RIMBP3Q9UFD9 1639 aa16.38■□□□□ 0.21
PABPC4-214ENST00000483770 CUX1P39880 1505 aa16.38■□□□□ 0.21
PABPC4-214ENST00000483770 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
PABPC4-214ENST00000483770 ARHGEF11O15085 1522 aa16.29■□□□□ 0.2
PABPC4-214ENST00000483770 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
PABPC4-214ENST00000483770 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
PABPC4-214ENST00000483770 WDR97A6NE52 1622 aa16.23■□□□□ 0.19
PABPC4-214ENST00000483770 CHMP7Q8WUX9 453 aaPredicted RBP16.22■□□□□ 0.19
PABPC4-214ENST00000483770 PBRM1Q86U86 1689 aa16.21■□□□□ 0.18
PABPC4-214ENST00000483770 GRIN2BQ13224 1484 aa16.19■□□□□ 0.18
PABPC4-214ENST00000483770 GAPVD1Q14C86 1478 aa16.17■□□□□ 0.18
PABPC4-214ENST00000483770 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
PABPC4-214ENST00000483770 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
PABPC4-214ENST00000483770 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
PABPC4-214ENST00000483770 ABCA10Q8WWZ4 1543 aa16.14■□□□□ 0.17
PABPC4-214ENST00000483770 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
PABPC4-214ENST00000483770 SYNJ2O15056 1496 aa16.12■□□□□ 0.17
PABPC4-214ENST00000483770 CLASP1Q7Z460 1538 aa16.12■□□□□ 0.17
PABPC4-214ENST00000483770 BIVM-ERCC5R4GMW8 1640 aa16.11■□□□□ 0.17
PABPC4-214ENST00000483770 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
PABPC4-214ENST00000483770 TOP2BQ02880 1626 aa16.1■□□□□ 0.17
PABPC4-214ENST00000483770 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
PABPC4-214ENST00000483770 ADAMTS12P58397 1594 aa16■□□□□ 0.15
PABPC4-214ENST00000483770 GRIN2AQ12879 1464 aa16■□□□□ 0.15
PABPC4-214ENST00000483770 ERCC6L2Q5T890 1561 aa16■□□□□ 0.15
PABPC4-214ENST00000483770 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
PABPC4-214ENST00000483770 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
PABPC4-214ENST00000483770 ERICH3Q5RHP9 1530 aa15.92■□□□□ 0.14
PABPC4-214ENST00000483770 NUP160Q12769 1436 aa15.92■□□□□ 0.14
PABPC4-214ENST00000483770 SHROOM2Q13796 1616 aa15.85■□□□□ 0.13
PABPC4-214ENST00000483770 JPH4Q96JJ6 628 aa15.83■□□□□ 0.12
PABPC4-214ENST00000483770 PRG4Q92954 1404 aaPredicted RBP15.82■□□□□ 0.12
PABPC4-214ENST00000483770 IGF1RP08069 1367 aa15.8■□□□□ 0.12
PABPC4-214ENST00000483770 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms