RNA–Protein interactions for RNA: ENST00000483683.1

COL4A2-208, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-208ENST00000483683 NISCHQ9Y2I1 1504 aa36.41■■■■□ 3.42
COL4A2-208ENST00000483683 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
COL4A2-208ENST00000483683 ABCC9O60706 1549 aa31.97■■■□□ 2.71
COL4A2-208ENST00000483683 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
COL4A2-208ENST00000483683 NACADO15069 1562 aa30.55■■■□□ 2.48
COL4A2-208ENST00000483683 DCAF8L2P0C7V8 631 aa30.49■■■□□ 2.47
COL4A2-208ENST00000483683 MYO15BQ96JP2 1530 aa30.33■■■□□ 2.45
COL4A2-208ENST00000483683 ZCCHC6Q5VYS8 1495 aaKnown RBP30.28■■■□□ 2.44
COL4A2-208ENST00000483683 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
COL4A2-208ENST00000483683 UNC13AQ9UPW8 1703 aa29.92■■■□□ 2.38
COL4A2-208ENST00000483683 PABPN1Q86U42 306 aaKnown RBP eCLIP29.87■■■□□ 2.37
COL4A2-208ENST00000483683 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
COL4A2-208ENST00000483683 DNAJC5BQ9UF47 199 aa29.66■■■□□ 2.34
COL4A2-208ENST00000483683 SCRIBQ14160 1630 aa29.55■■■□□ 2.32
COL4A2-208ENST00000483683 SHROOM4Q9ULL8 1493 aa29.39■■■□□ 2.3
COL4A2-208ENST00000483683 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
COL4A2-208ENST00000483683 CC2D2AQ9P2K1 1620 aa28.9■■■□□ 2.22
COL4A2-208ENST00000483683 CECR2Q9BXF3 1484 aa28.75■■■□□ 2.19
COL4A2-208ENST00000483683 SMARCA4P51532 1647 aa28.27■■■□□ 2.12
COL4A2-208ENST00000483683 NCAPD3P42695 1498 aa28.25■■■□□ 2.11
COL4A2-208ENST00000483683 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
COL4A2-208ENST00000483683 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.1
COL4A2-208ENST00000483683 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
COL4A2-208ENST00000483683 MROH2BQ7Z745 1585 aa28.07■■■□□ 2.08
COL4A2-208ENST00000483683 HMGXB3Q12766 1538 aa28.04■■■□□ 2.08
COL4A2-208ENST00000483683 PEG3Q9GZU2 1588 aa28.03■■■□□ 2.08
COL4A2-208ENST00000483683 BAZ1BQ9UIG0 1483 aaKnown RBP27.92■■■□□ 2.06
COL4A2-208ENST00000483683 WIZO95785 1651 aa27.72■■■□□ 2.03
COL4A2-208ENST00000483683 RSF1Q96T23 1441 aaPredicted RBP27.68■■■□□ 2.02
COL4A2-208ENST00000483683 NESP48681 1621 aa27.63■■■□□ 2.01
COL4A2-208ENST00000483683 ERCC6Q03468 1493 aa27.52■■■□□ 2
COL4A2-208ENST00000483683 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
COL4A2-208ENST00000483683 CADPSQ9ULU8 1353 aa27.41■■□□□ 1.98
COL4A2-208ENST00000483683 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
COL4A2-208ENST00000483683 CUX2O14529 1486 aa27.35■■□□□ 1.97
COL4A2-208ENST00000483683 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
COL4A2-208ENST00000483683 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
COL4A2-208ENST00000483683 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
COL4A2-208ENST00000483683 CFTRP13569 1480 aa27.19■■□□□ 1.94
COL4A2-208ENST00000483683 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
COL4A2-208ENST00000483683 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
COL4A2-208ENST00000483683 MRC2Q9UBG0 1479 aa27.05■■□□□ 1.92
COL4A2-208ENST00000483683 CEP164Q9UPV0 1460 aa27.02■■□□□ 1.92
COL4A2-208ENST00000483683 WDR62O43379 1518 aa26.96■■□□□ 1.91
COL4A2-208ENST00000483683 PRDM2Q13029 1718 aa26.86■■□□□ 1.89
COL4A2-208ENST00000483683 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
COL4A2-208ENST00000483683 URB2Q14146 1524 aaKnown RBP26.82■■□□□ 1.88
COL4A2-208ENST00000483683 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
COL4A2-208ENST00000483683 TOPBP1Q92547 1522 aa26.61■■□□□ 1.85
COL4A2-208ENST00000483683 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
COL4A2-208ENST00000483683 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
COL4A2-208ENST00000483683 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
COL4A2-208ENST00000483683 ZNF608Q9ULD9 1512 aaPredicted RBP26.41■■□□□ 1.82
COL4A2-208ENST00000483683 POLA1P09884 1462 aaPredicted RBP26.37■■□□□ 1.81
COL4A2-208ENST00000483683 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
COL4A2-208ENST00000483683 CUX1P39880 1505 aa26.33■■□□□ 1.81
COL4A2-208ENST00000483683 RAD54L2Q9Y4B4 1467 aa26.27■■□□□ 1.8
COL4A2-208ENST00000483683 FGD5Q6ZNL6 1462 aa26.26■■□□□ 1.79
COL4A2-208ENST00000483683 SOGA1O94964 1423 aa26.26■■□□□ 1.79
COL4A2-208ENST00000483683 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
COL4A2-208ENST00000483683 AQRO60306 1485 aaKnown RBP eCLIP26.23■■□□□ 1.79
COL4A2-208ENST00000483683 OSCARQ8IYS5 282 aa26.22■■□□□ 1.79
COL4A2-208ENST00000483683 TDRD9Q8NDG6 1382 aaKnown RBP26.16■■□□□ 1.78
COL4A2-208ENST00000483683 WDR97A6NE52 1622 aa26.07■■□□□ 1.76
COL4A2-208ENST00000483683 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.76
COL4A2-208ENST00000483683 TOP2BQ02880 1626 aa26.02■■□□□ 1.76
COL4A2-208ENST00000483683 SYNJ1O43426 1573 aa26.01■■□□□ 1.75
COL4A2-208ENST00000483683 ABCA10Q8WWZ4 1543 aa26.01■■□□□ 1.75
COL4A2-208ENST00000483683 BIVM-ERCC5R4GMW8 1640 aa26.01■■□□□ 1.75
COL4A2-208ENST00000483683 GRIN2BQ13224 1484 aa25.97■■□□□ 1.75
COL4A2-208ENST00000483683 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
COL4A2-208ENST00000483683 SNAPC4Q5SXM2 1469 aa25.95■■□□□ 1.74
COL4A2-208ENST00000483683 CHD1O14646 1710 aa25.94■■□□□ 1.74
COL4A2-208ENST00000483683 FBLN2P98095 1184 aa25.93■■□□□ 1.74
COL4A2-208ENST00000483683 MAGI1Q96QZ7 1491 aaPredicted RBP25.91■■□□□ 1.74
COL4A2-208ENST00000483683 ABCA5Q8WWZ7 1642 aa25.9■■□□□ 1.74
COL4A2-208ENST00000483683 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
COL4A2-208ENST00000483683 PBRM1Q86U86 1689 aa25.83■■□□□ 1.73
COL4A2-208ENST00000483683 SYNJ2O15056 1496 aa25.83■■□□□ 1.73
COL4A2-208ENST00000483683 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
COL4A2-208ENST00000483683 RIMBP3CA6NJZ7 1639 aa25.77■■□□□ 1.72
COL4A2-208ENST00000483683 RIMBP3BA6NNM3 1639 aa25.77■■□□□ 1.72
COL4A2-208ENST00000483683 RIMBP3Q9UFD9 1639 aa25.77■■□□□ 1.72
COL4A2-208ENST00000483683 ARHGEF11O15085 1522 aa25.77■■□□□ 1.72
COL4A2-208ENST00000483683 CLASP1Q7Z460 1538 aa25.71■■□□□ 1.71
COL4A2-208ENST00000483683 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
COL4A2-208ENST00000483683 ADAMTS12P58397 1594 aa25.65■■□□□ 1.7
COL4A2-208ENST00000483683 FHAD1B1AJZ9 1412 aa25.64■■□□□ 1.7
COL4A2-208ENST00000483683 GRIN2AQ12879 1464 aa25.63■■□□□ 1.69
COL4A2-208ENST00000483683 NUP160Q12769 1436 aa25.56■■□□□ 1.68
COL4A2-208ENST00000483683 ARAP1Q96P48 1450 aa25.56■■□□□ 1.68
COL4A2-208ENST00000483683 CYB5RLQ6IPT4 315 aa25.56■■□□□ 1.68
COL4A2-208ENST00000483683 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
COL4A2-208ENST00000483683 IGF1RP08069 1367 aa25.53■■□□□ 1.68
COL4A2-208ENST00000483683 CEP170Q5SW79 1584 aa25.51■■□□□ 1.67
COL4A2-208ENST00000483683 SHROOM2Q13796 1616 aa25.36■■□□□ 1.65
COL4A2-208ENST00000483683 CUL7Q14999 1698 aa25.36■■□□□ 1.65
COL4A2-208ENST00000483683 ERCC6L2Q5T890 1561 aa25.35■■□□□ 1.65
COL4A2-208ENST00000483683 CARMIL1Q5VZK9 1371 aa25.33■■□□□ 1.65
COL4A2-208ENST00000483683 JPH4Q96JJ6 628 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms