RNA–Protein interactions for RNA: ENST00000483682.1

ARHGEF11-204, Transcript of Rho guanine nucleotide exchange factor 11, humanhuman

TSL 3

Gene ARHGEF11, Length 466 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF11-204ENST00000483682 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
ARHGEF11-204ENST00000483682 ABCC9O60706 1549 aa25.88■■□□□ 1.73
ARHGEF11-204ENST00000483682 CCDC180Q9P1Z9 1646 aa25.88■■□□□ 1.73
ARHGEF11-204ENST00000483682 RB1CC1Q8TDY2 1594 aa24.68■■□□□ 1.54
ARHGEF11-204ENST00000483682 NACADO15069 1562 aa24.5■■□□□ 1.51
ARHGEF11-204ENST00000483682 DCAF8L2P0C7V8 631 aa24.42■■□□□ 1.5
ARHGEF11-204ENST00000483682 DNAJC5BQ9UF47 199 aa24.23■■□□□ 1.47
ARHGEF11-204ENST00000483682 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
ARHGEF11-204ENST00000483682 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.45
ARHGEF11-204ENST00000483682 UNC13AQ9UPW8 1703 aa24■■□□□ 1.43
ARHGEF11-204ENST00000483682 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
ARHGEF11-204ENST00000483682 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
ARHGEF11-204ENST00000483682 DCAF1Q9Y4B6 1507 aa23.82■■□□□ 1.4
ARHGEF11-204ENST00000483682 SHROOM4Q9ULL8 1493 aa23.67■■□□□ 1.38
ARHGEF11-204ENST00000483682 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
ARHGEF11-204ENST00000483682 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
ARHGEF11-204ENST00000483682 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
ARHGEF11-204ENST00000483682 EIF4G1Q04637 1599 aaKnown RBP23.32■■□□□ 1.32
ARHGEF11-204ENST00000483682 NCAPD3P42695 1498 aa22.6■■□□□ 1.21
ARHGEF11-204ENST00000483682 ATAD2BQ9ULI0 1458 aa22.51■■□□□ 1.19
ARHGEF11-204ENST00000483682 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
ARHGEF11-204ENST00000483682 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
ARHGEF11-204ENST00000483682 HMGXB3Q12766 1538 aa22.43■■□□□ 1.18
ARHGEF11-204ENST00000483682 ERCC6Q03468 1493 aa22.43■■□□□ 1.18
ARHGEF11-204ENST00000483682 BAZ1AQ9NRL2 1556 aaPredicted RBP22.41■■□□□ 1.18
ARHGEF11-204ENST00000483682 CUX2O14529 1486 aa22.38■■□□□ 1.17
ARHGEF11-204ENST00000483682 DNAJC5Q9H3Z4 198 aa22.37■■□□□ 1.17
ARHGEF11-204ENST00000483682 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
ARHGEF11-204ENST00000483682 PEG3Q9GZU2 1588 aa22.26■■□□□ 1.15
ARHGEF11-204ENST00000483682 NESP48681 1621 aa22.19■■□□□ 1.14
ARHGEF11-204ENST00000483682 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
ARHGEF11-204ENST00000483682 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
ARHGEF11-204ENST00000483682 PDS5BQ9NTI5 1447 aa22.03■■□□□ 1.12
ARHGEF11-204ENST00000483682 THOC2Q8NI27 1593 aaKnown RBP21.98■■□□□ 1.11
ARHGEF11-204ENST00000483682 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
ARHGEF11-204ENST00000483682 KIF21AQ7Z4S6 1674 aa21.91■■□□□ 1.1
ARHGEF11-204ENST00000483682 WIZO95785 1651 aa21.9■■□□□ 1.1
ARHGEF11-204ENST00000483682 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
ARHGEF11-204ENST00000483682 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
ARHGEF11-204ENST00000483682 CEP164Q9UPV0 1460 aa21.72■■□□□ 1.07
ARHGEF11-204ENST00000483682 WDR62O43379 1518 aa21.71■■□□□ 1.07
ARHGEF11-204ENST00000483682 FANCD2Q9BXW9 1451 aa21.67■■□□□ 1.06
ARHGEF11-204ENST00000483682 TOP2AP11388 1531 aaKnown RBP21.66■■□□□ 1.06
ARHGEF11-204ENST00000483682 CFTRP13569 1480 aa21.65■■□□□ 1.06
ARHGEF11-204ENST00000483682 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
ARHGEF11-204ENST00000483682 PRDM2Q13029 1718 aa21.42■■□□□ 1.02
ARHGEF11-204ENST00000483682 TRIM41Q8WV44 630 aa21.41■■□□□ 1.02
ARHGEF11-204ENST00000483682 CCDC88BA6NC98 1476 aa21.4■■□□□ 1.02
ARHGEF11-204ENST00000483682 OSCARQ8IYS5 282 aa21.39■■□□□ 1.01
ARHGEF11-204ENST00000483682 IFT140Q96RY7 1462 aa21.29■■□□□ 1
ARHGEF11-204ENST00000483682 ABCC8Q09428 1581 aa21.28■■□□□ 1
ARHGEF11-204ENST00000483682 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
ARHGEF11-204ENST00000483682 ZNF608Q9ULD9 1512 aaPredicted RBP21.18■□□□□ 0.98
ARHGEF11-204ENST00000483682 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
ARHGEF11-204ENST00000483682 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
ARHGEF11-204ENST00000483682 TARBP1Q13395 1621 aaKnown RBP21.02■□□□□ 0.96
ARHGEF11-204ENST00000483682 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.951e-9■■■■□ 22.4
ARHGEF11-204ENST00000483682 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
ARHGEF11-204ENST00000483682 RIMBP3CA6NJZ7 1639 aa21.01■□□□□ 0.95
ARHGEF11-204ENST00000483682 RIMBP3BA6NNM3 1639 aa21.01■□□□□ 0.95
ARHGEF11-204ENST00000483682 RIMBP3Q9UFD9 1639 aa21.01■□□□□ 0.95
ARHGEF11-204ENST00000483682 FBLN2P98095 1184 aa20.97■□□□□ 0.95
ARHGEF11-204ENST00000483682 SOGA1O94964 1423 aa20.96■□□□□ 0.95
ARHGEF11-204ENST00000483682 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
ARHGEF11-204ENST00000483682 RAD54L2Q9Y4B4 1467 aa20.92■□□□□ 0.94
ARHGEF11-204ENST00000483682 CHD1O14646 1710 aa20.92■□□□□ 0.94
ARHGEF11-204ENST00000483682 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
ARHGEF11-204ENST00000483682 WDR97A6NE52 1622 aa20.89■□□□□ 0.94
ARHGEF11-204ENST00000483682 FGD5Q6ZNL6 1462 aa20.89■□□□□ 0.94
ARHGEF11-204ENST00000483682 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
ARHGEF11-204ENST00000483682 CUX1P39880 1505 aa20.83■□□□□ 0.93
ARHGEF11-204ENST00000483682 CHMP7Q8WUX9 453 aaPredicted RBP20.82■□□□□ 0.92
ARHGEF11-204ENST00000483682 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
ARHGEF11-204ENST00000483682 SUPT5HO00267 1087 aaKnown RBP20.81■□□□□ 0.92
ARHGEF11-204ENST00000483682 MAGI1Q96QZ7 1491 aaPredicted RBP20.8■□□□□ 0.92
ARHGEF11-204ENST00000483682 GRIN2BQ13224 1484 aa20.79■□□□□ 0.92
ARHGEF11-204ENST00000483682 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
ARHGEF11-204ENST00000483682 ARAP1Q96P48 1450 aa20.74■□□□□ 0.91
ARHGEF11-204ENST00000483682 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
ARHGEF11-204ENST00000483682 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
ARHGEF11-204ENST00000483682 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
ARHGEF11-204ENST00000483682 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
ARHGEF11-204ENST00000483682 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
ARHGEF11-204ENST00000483682 PBRM1Q86U86 1689 aa20.65■□□□□ 0.9
ARHGEF11-204ENST00000483682 WRNQ14191 1432 aaPredicted RBP eCLIP20.62■□□□□ 0.89
ARHGEF11-204ENST00000483682 ABCA5Q8WWZ7 1642 aa20.6■□□□□ 0.89
ARHGEF11-204ENST00000483682 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
ARHGEF11-204ENST00000483682 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
ARHGEF11-204ENST00000483682 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
ARHGEF11-204ENST00000483682 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
ARHGEF11-204ENST00000483682 FHAD1B1AJZ9 1412 aa20.45■□□□□ 0.86
ARHGEF11-204ENST00000483682 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
ARHGEF11-204ENST00000483682 NUP160Q12769 1436 aa20.42■□□□□ 0.86
ARHGEF11-204ENST00000483682 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
ARHGEF11-204ENST00000483682 ERCC6L2Q5T890 1561 aa20.31■□□□□ 0.84
ARHGEF11-204ENST00000483682 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
ARHGEF11-204ENST00000483682 JPH4Q96JJ6 628 aa20.26■□□□□ 0.83
ARHGEF11-204ENST00000483682 PRG4Q92954 1404 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF11-204ENST00000483682 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
ARHGEF11-204ENST00000483682 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms