RNA–Protein interactions for RNA: ENST00000483667.1

USP19-213, Transcript of ubiquitin specific peptidase 19, humanhuman

TSL 2

Gene USP19, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-213ENST00000483667 NISCHQ9Y2I1 1504 aa19.92■□□□□ 0.78
USP19-213ENST00000483667 CCDC180Q9P1Z9 1646 aa17.64■□□□□ 0.41
USP19-213ENST00000483667 ABCC9O60706 1549 aa16.99■□□□□ 0.31
USP19-213ENST00000483667 ZCCHC6Q5VYS8 1495 aaKnown RBP16.65■□□□□ 0.26
USP19-213ENST00000483667 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
USP19-213ENST00000483667 DCAF1Q9Y4B6 1507 aa16.57■□□□□ 0.24
USP19-213ENST00000483667 NACADO15069 1562 aa16.55■□□□□ 0.24
USP19-213ENST00000483667 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
USP19-213ENST00000483667 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
USP19-213ENST00000483667 SCRIBQ14160 1630 aa16.02■□□□□ 0.16
USP19-213ENST00000483667 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.15
USP19-213ENST00000483667 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
USP19-213ENST00000483667 SHROOM4Q9ULL8 1493 aa15.96■□□□□ 0.14
USP19-213ENST00000483667 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
USP19-213ENST00000483667 EIF4G1Q04637 1599 aaKnown RBP15.54■□□□□ 0.08
USP19-213ENST00000483667 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
USP19-213ENST00000483667 BAZ1AQ9NRL2 1556 aaPredicted RBP15.45■□□□□ 0.06
USP19-213ENST00000483667 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
USP19-213ENST00000483667 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
USP19-213ENST00000483667 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
USP19-213ENST00000483667 MROH2BQ7Z745 1585 aa15.32■□□□□ 0.04
USP19-213ENST00000483667 PEG3Q9GZU2 1588 aa15.31■□□□□ 0.04
USP19-213ENST00000483667 SMARCA2P51531 1590 aa15.29■□□□□ 0.04
USP19-213ENST00000483667 NCAPD3P42695 1498 aa15.29■□□□□ 0.04
USP19-213ENST00000483667 ATAD2BQ9ULI0 1458 aa15.28■□□□□ 0.04
USP19-213ENST00000483667 RSF1Q96T23 1441 aaPredicted RBP15.25■□□□□ 0.03
USP19-213ENST00000483667 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
USP19-213ENST00000483667 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
USP19-213ENST00000483667 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
USP19-213ENST00000483667 WIZO95785 1651 aa15.12■□□□□ 0.01
USP19-213ENST00000483667 TOP2AP11388 1531 aaKnown RBP15.05■□□□□ -0
USP19-213ENST00000483667 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
USP19-213ENST00000483667 LAMC3Q9Y6N6 1575 aa14.83□□□□□ -0.04
USP19-213ENST00000483667 CADPSQ9ULU8 1353 aa14.83□□□□□ -0.04
USP19-213ENST00000483667 CFTRP13569 1480 aa14.79□□□□□ -0.04
USP19-213ENST00000483667 NESP48681 1621 aa14.75□□□□□ -0.05
USP19-213ENST00000483667 PDS5BQ9NTI5 1447 aa14.73□□□□□ -0.05
USP19-213ENST00000483667 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
USP19-213ENST00000483667 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
USP19-213ENST00000483667 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
USP19-213ENST00000483667 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
USP19-213ENST00000483667 KIF21AQ7Z4S6 1674 aa14.56□□□□□ -0.08
USP19-213ENST00000483667 MRC2Q9UBG0 1479 aa14.55□□□□□ -0.08
USP19-213ENST00000483667 THOC2Q8NI27 1593 aaKnown RBP14.53□□□□□ -0.08
USP19-213ENST00000483667 WDR62O43379 1518 aa14.51□□□□□ -0.09
USP19-213ENST00000483667 CUX2O14529 1486 aa14.5□□□□□ -0.09
USP19-213ENST00000483667 CHIC1Q5VXU3 224 aa14.5□□□□□ -0.09
USP19-213ENST00000483667 ABCC8Q09428 1581 aa14.49□□□□□ -0.09
USP19-213ENST00000483667 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.1
USP19-213ENST00000483667 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
USP19-213ENST00000483667 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
USP19-213ENST00000483667 TOPBP1Q92547 1522 aa14.41□□□□□ -0.1
USP19-213ENST00000483667 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
USP19-213ENST00000483667 CUX1P39880 1505 aa14.36□□□□□ -0.11
USP19-213ENST00000483667 TOP2BQ02880 1626 aa14.32□□□□□ -0.12
USP19-213ENST00000483667 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
USP19-213ENST00000483667 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
USP19-213ENST00000483667 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
USP19-213ENST00000483667 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
USP19-213ENST00000483667 SYNJ1O43426 1573 aa14.28□□□□□ -0.12
USP19-213ENST00000483667 SOGA1O94964 1423 aa14.25□□□□□ -0.13
USP19-213ENST00000483667 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
USP19-213ENST00000483667 EEA1Q15075 1411 aa14.22□□□□□ -0.13
USP19-213ENST00000483667 WDR97A6NE52 1622 aa14.22□□□□□ -0.13
USP19-213ENST00000483667 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
USP19-213ENST00000483667 RAD54L2Q9Y4B4 1467 aa14.2□□□□□ -0.14
USP19-213ENST00000483667 ZNF608Q9ULD9 1512 aaPredicted RBP14.16□□□□□ -0.14
USP19-213ENST00000483667 EIF4G3O43432 1585 aaKnown RBP14.13□□□□□ -0.15
USP19-213ENST00000483667 TDRD9Q8NDG6 1382 aaKnown RBP14.11□□□□□ -0.15
USP19-213ENST00000483667 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.152e-8■■■■□ 23.8
USP19-213ENST00000483667 ABCA5Q8WWZ7 1642 aa14.1□□□□□ -0.15
USP19-213ENST00000483667 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
USP19-213ENST00000483667 GRIN2BQ13224 1484 aa14.08□□□□□ -0.16
USP19-213ENST00000483667 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
USP19-213ENST00000483667 MAGI1Q96QZ7 1491 aaPredicted RBP14.05□□□□□ -0.16
USP19-213ENST00000483667 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
USP19-213ENST00000483667 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
USP19-213ENST00000483667 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
USP19-213ENST00000483667 PBRM1Q86U86 1689 aa13.99□□□□□ -0.17
USP19-213ENST00000483667 FAM9AQ8IZU1 332 aaPredicted RBP13.98□□□□□ -0.17
USP19-213ENST00000483667 IGF1RP08069 1367 aa13.97□□□□□ -0.17
USP19-213ENST00000483667 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
USP19-213ENST00000483667 FHAD1B1AJZ9 1412 aa13.97□□□□□ -0.17
USP19-213ENST00000483667 ADAMTS12P58397 1594 aa13.95□□□□□ -0.18
USP19-213ENST00000483667 CUL7Q14999 1698 aa13.93□□□□□ -0.18
USP19-213ENST00000483667 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
USP19-213ENST00000483667 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
USP19-213ENST00000483667 GRIN2AQ12879 1464 aa13.9□□□□□ -0.18
USP19-213ENST00000483667 KIF21BO75037 1637 aa13.9□□□□□ -0.19
USP19-213ENST00000483667 GOLGA3Q08378 1498 aa13.89□□□□□ -0.19
USP19-213ENST00000483667 CARMIL1Q5VZK9 1371 aa13.89□□□□□ -0.19
USP19-213ENST00000483667 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
USP19-213ENST00000483667 FBLN2P98095 1184 aa13.86□□□□□ -0.19
USP19-213ENST00000483667 CHD1O14646 1710 aa13.86□□□□□ -0.19
USP19-213ENST00000483667 PRXQ9BXM0 1461 aa13.86□□□□□ -0.19
USP19-213ENST00000483667 NUP160Q12769 1436 aa13.85□□□□□ -0.19
USP19-213ENST00000483667 UBTFP17480 764 aaKnown RBP13.84□□□□□ -0.19
USP19-213ENST00000483667 RAPGEF2Q9Y4G8 1499 aa13.84□□□□□ -0.19
USP19-213ENST00000483667 LOC105371045A0A1W2PR82 267 aa13.83□□□□□ -0.2
USP19-213ENST00000483667 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms