RNA–Protein interactions for RNA: ENST00000483638.1

LRRC8A-204, Transcript of leucine rich repeat containing 8 VRAC subunit A, humanhuman

TSL 3

Gene LRRC8A, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8A-204ENST00000483638 NISCHQ9Y2I1 1504 aa29.62■■■□□ 2.33
LRRC8A-204ENST00000483638 CCDC180Q9P1Z9 1646 aa26.53■■□□□ 1.84
LRRC8A-204ENST00000483638 ABCC9O60706 1549 aa26.11■■□□□ 1.77
LRRC8A-204ENST00000483638 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
LRRC8A-204ENST00000483638 NACADO15069 1562 aa24.93■■□□□ 1.58
LRRC8A-204ENST00000483638 DCAF8L2P0C7V8 631 aa24.76■■□□□ 1.55
LRRC8A-204ENST00000483638 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
LRRC8A-204ENST00000483638 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
LRRC8A-204ENST00000483638 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.53
LRRC8A-204ENST00000483638 DCAF1Q9Y4B6 1507 aa24.5■■□□□ 1.51
LRRC8A-204ENST00000483638 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
LRRC8A-204ENST00000483638 PABPN1Q86U42 306 aaKnown RBP eCLIP24.29■■□□□ 1.48
LRRC8A-204ENST00000483638 SCRIBQ14160 1630 aa24.17■■□□□ 1.46
LRRC8A-204ENST00000483638 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
LRRC8A-204ENST00000483638 SHROOM4Q9ULL8 1493 aa23.98■■□□□ 1.43
LRRC8A-204ENST00000483638 EIF4G1Q04637 1599 aaKnown RBP23.67■■□□□ 1.38
LRRC8A-204ENST00000483638 CC2D2AQ9P2K1 1620 aa23.64■■□□□ 1.38
LRRC8A-204ENST00000483638 CECR2Q9BXF3 1484 aa23.47■■□□□ 1.35
LRRC8A-204ENST00000483638 SMARCA4P51532 1647 aa23.08■■□□□ 1.29
LRRC8A-204ENST00000483638 BAZ1AQ9NRL2 1556 aaPredicted RBP22.99■■□□□ 1.27
LRRC8A-204ENST00000483638 NCAPD3P42695 1498 aa22.96■■□□□ 1.27
LRRC8A-204ENST00000483638 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
LRRC8A-204ENST00000483638 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
LRRC8A-204ENST00000483638 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
LRRC8A-204ENST00000483638 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
LRRC8A-204ENST00000483638 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
LRRC8A-204ENST00000483638 BAZ1BQ9UIG0 1483 aaKnown RBP22.78■■□□□ 1.24
LRRC8A-204ENST00000483638 WIZO95785 1651 aa22.62■■□□□ 1.21
LRRC8A-204ENST00000483638 NESP48681 1621 aa22.53■■□□□ 1.2
LRRC8A-204ENST00000483638 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
LRRC8A-204ENST00000483638 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
LRRC8A-204ENST00000483638 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.18
LRRC8A-204ENST00000483638 CUX2O14529 1486 aa22.35■■□□□ 1.17
LRRC8A-204ENST00000483638 KIF21AQ7Z4S6 1674 aa22.35■■□□□ 1.17
LRRC8A-204ENST00000483638 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
LRRC8A-204ENST00000483638 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
LRRC8A-204ENST00000483638 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
LRRC8A-204ENST00000483638 PDS5BQ9NTI5 1447 aa22.24■■□□□ 1.15
LRRC8A-204ENST00000483638 CFTRP13569 1480 aa22.11■■□□□ 1.13
LRRC8A-204ENST00000483638 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
LRRC8A-204ENST00000483638 MRC2Q9UBG0 1479 aa22.07■■□□□ 1.12
LRRC8A-204ENST00000483638 CEP164Q9UPV0 1460 aa22.06■■□□□ 1.12
LRRC8A-204ENST00000483638 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
LRRC8A-204ENST00000483638 CCDC88BA6NC98 1476 aa22.04■■□□□ 1.12
LRRC8A-204ENST00000483638 WDR62O43379 1518 aa22.03■■□□□ 1.12
LRRC8A-204ENST00000483638 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
LRRC8A-204ENST00000483638 DNAJC5Q9H3Z4 198 aa21.86■■□□□ 1.09
LRRC8A-204ENST00000483638 TOPBP1Q92547 1522 aa21.69■■□□□ 1.06
LRRC8A-204ENST00000483638 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
LRRC8A-204ENST00000483638 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
LRRC8A-204ENST00000483638 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
LRRC8A-204ENST00000483638 IFT140Q96RY7 1462 aa21.58■■□□□ 1.05
LRRC8A-204ENST00000483638 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
LRRC8A-204ENST00000483638 TARBP1Q13395 1621 aaKnown RBP21.51■■□□□ 1.03
LRRC8A-204ENST00000483638 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
LRRC8A-204ENST00000483638 POLA1P09884 1462 aaPredicted RBP21.49■■□□□ 1.03
LRRC8A-204ENST00000483638 CUX1P39880 1505 aa21.45■■□□□ 1.02
LRRC8A-204ENST00000483638 FGD5Q6ZNL6 1462 aa21.41■■□□□ 1.02
LRRC8A-204ENST00000483638 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
LRRC8A-204ENST00000483638 AQRO60306 1485 aaKnown RBP eCLIP21.35■■□□□ 1.01
LRRC8A-204ENST00000483638 SOGA1O94964 1423 aa21.34■■□□□ 1.01
LRRC8A-204ENST00000483638 WDR97A6NE52 1622 aa21.33■■□□□ 1.01
LRRC8A-204ENST00000483638 CHD1O14646 1710 aa21.31■■□□□ 1
LRRC8A-204ENST00000483638 OSCARQ8IYS5 282 aa21.3■■□□□ 1
LRRC8A-204ENST00000483638 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
LRRC8A-204ENST00000483638 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
LRRC8A-204ENST00000483638 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
LRRC8A-204ENST00000483638 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
LRRC8A-204ENST00000483638 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
LRRC8A-204ENST00000483638 WRNQ14191 1432 aaPredicted RBP eCLIP21.19■□□□□ 0.98
LRRC8A-204ENST00000483638 SNAPC4Q5SXM2 1469 aa21.19■□□□□ 0.98
LRRC8A-204ENST00000483638 ABCA10Q8WWZ4 1543 aa21.18■□□□□ 0.98
LRRC8A-204ENST00000483638 ABCA5Q8WWZ7 1642 aa21.17■□□□□ 0.98
LRRC8A-204ENST00000483638 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
LRRC8A-204ENST00000483638 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
LRRC8A-204ENST00000483638 RIMBP3CA6NJZ7 1639 aa21.13■□□□□ 0.97
LRRC8A-204ENST00000483638 RIMBP3BA6NNM3 1639 aa21.13■□□□□ 0.97
LRRC8A-204ENST00000483638 RIMBP3Q9UFD9 1639 aa21.13■□□□□ 0.97
LRRC8A-204ENST00000483638 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
LRRC8A-204ENST00000483638 FBLN2P98095 1184 aa21.1■□□□□ 0.97
LRRC8A-204ENST00000483638 TRIM41Q8WV44 630 aa21.08■□□□□ 0.97
LRRC8A-204ENST00000483638 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
LRRC8A-204ENST00000483638 SYNJ2O15056 1496 aa21.05■□□□□ 0.96
LRRC8A-204ENST00000483638 CLASP1Q7Z460 1538 aa21■□□□□ 0.95
LRRC8A-204ENST00000483638 CHMP7Q8WUX9 453 aaPredicted RBP20.99■□□□□ 0.95
LRRC8A-204ENST00000483638 ADAMTS12P58397 1594 aa20.98■□□□□ 0.95
LRRC8A-204ENST00000483638 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
LRRC8A-204ENST00000483638 GRIN2AQ12879 1464 aa20.9■□□□□ 0.94
LRRC8A-204ENST00000483638 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
LRRC8A-204ENST00000483638 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
LRRC8A-204ENST00000483638 CEP170Q5SW79 1584 aa20.85■□□□□ 0.93
LRRC8A-204ENST00000483638 NUP160Q12769 1436 aa20.8■□□□□ 0.92
LRRC8A-204ENST00000483638 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
LRRC8A-204ENST00000483638 KIF27Q86VH2 1401 aa20.75■□□□□ 0.91
LRRC8A-204ENST00000483638 CUL7Q14999 1698 aa20.73■□□□□ 0.91
LRRC8A-204ENST00000483638 SHROOM2Q13796 1616 aa20.73■□□□□ 0.91
LRRC8A-204ENST00000483638 ERCC6L2Q5T890 1561 aa20.71■□□□□ 0.91
LRRC8A-204ENST00000483638 RUSC2Q8N2Y8 1516 aa20.69■□□□□ 0.9
LRRC8A-204ENST00000483638 IGF1RP08069 1367 aa20.66■□□□□ 0.9
LRRC8A-204ENST00000483638 PRG4Q92954 1404 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms