RNA–Protein interactions for RNA: ENST00000483579.1

CAPN2-208, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-208ENST00000483579 NISCHQ9Y2I1 1504 aa53■■■■■ 6.07
CAPN2-208ENST00000483579 CCDC180Q9P1Z9 1646 aa47.34■■■■■ 5.17
CAPN2-208ENST00000483579 ABCC9O60706 1549 aa46.7■■■■■ 5.07
CAPN2-208ENST00000483579 RB1CC1Q8TDY2 1594 aa44.73■■■■■ 4.75
CAPN2-208ENST00000483579 NACADO15069 1562 aa44.56■■■■■ 4.72
CAPN2-208ENST00000483579 DCAF8L2P0C7V8 631 aa44.52■■■■■ 4.72
CAPN2-208ENST00000483579 MYO15BQ96JP2 1530 aa44.09■■■■■ 4.65
CAPN2-208ENST00000483579 ZCCHC6Q5VYS8 1495 aaKnown RBP44.06■■■■■ 4.64
CAPN2-208ENST00000483579 UNC13AQ9UPW8 1703 aa43.85■■■■■ 4.61
CAPN2-208ENST00000483579 DCAF1Q9Y4B6 1507 aa43.78■■■■■ 4.6
CAPN2-208ENST00000483579 PABPN1Q86U42 306 aaKnown RBP eCLIP43.56■■■■■ 4.56
CAPN2-208ENST00000483579 BICRAQ9NZM4 1560 aa43.38■■■■■ 4.54
CAPN2-208ENST00000483579 SCRIBQ14160 1630 aa43.21■■■■■ 4.51
CAPN2-208ENST00000483579 DNAJC5BQ9UF47 199 aa43.17■■■■■ 4.5
CAPN2-208ENST00000483579 SHROOM4Q9ULL8 1493 aa42.81■■■■■ 4.44
CAPN2-208ENST00000483579 EIF4G1Q04637 1599 aaKnown RBP42.28■■■■■ 4.36
CAPN2-208ENST00000483579 CC2D2AQ9P2K1 1620 aa42.24■■■■■ 4.35
CAPN2-208ENST00000483579 CECR2Q9BXF3 1484 aa41.98■■■■■ 4.31
CAPN2-208ENST00000483579 SMARCA4P51532 1647 aa41.25■■■■■ 4.19
CAPN2-208ENST00000483579 BAZ1AQ9NRL2 1556 aaPredicted RBP41.12■■■■■ 4.17
CAPN2-208ENST00000483579 NCAPD3P42695 1498 aa41.08■■■■■ 4.17
CAPN2-208ENST00000483579 ATAD2BQ9ULI0 1458 aa41.07■■■■■ 4.16
CAPN2-208ENST00000483579 SMARCA2P51531 1590 aa41.03■■■■■ 4.16
CAPN2-208ENST00000483579 HMGXB3Q12766 1538 aa40.88■■■■■ 4.13
CAPN2-208ENST00000483579 MROH2BQ7Z745 1585 aa40.86■■■■■ 4.13
CAPN2-208ENST00000483579 PEG3Q9GZU2 1588 aa40.79■■■■■ 4.12
CAPN2-208ENST00000483579 BAZ1BQ9UIG0 1483 aaKnown RBP40.75■■■■■ 4.11
CAPN2-208ENST00000483579 WIZO95785 1651 aa40.46■■■■■ 4.07
CAPN2-208ENST00000483579 ERCC6Q03468 1493 aa40.3■■■■■ 4.04
CAPN2-208ENST00000483579 NESP48681 1621 aa40.3■■■■■ 4.04
CAPN2-208ENST00000483579 RSF1Q96T23 1441 aaPredicted RBP40.22■■■■■ 4.03
CAPN2-208ENST00000483579 LAMC3Q9Y6N6 1575 aa40.12■■■■■ 4.01
CAPN2-208ENST00000483579 TOP2AP11388 1531 aaKnown RBP39.95■■■■□ 3.99
CAPN2-208ENST00000483579 CUX2O14529 1486 aa39.94■■■■□ 3.98
CAPN2-208ENST00000483579 KIF21AQ7Z4S6 1674 aa39.89■■■■□ 3.98
CAPN2-208ENST00000483579 CADPSQ9ULU8 1353 aa39.87■■■■□ 3.97
CAPN2-208ENST00000483579 PDS5BQ9NTI5 1447 aa39.83■■■■□ 3.97
CAPN2-208ENST00000483579 THOC2Q8NI27 1593 aaKnown RBP39.77■■■■□ 3.96
CAPN2-208ENST00000483579 CFTRP13569 1480 aa39.56■■■■□ 3.92
CAPN2-208ENST00000483579 CCDC88BA6NC98 1476 aa39.47■■■■□ 3.91
CAPN2-208ENST00000483579 MRC2Q9UBG0 1479 aa39.47■■■■□ 3.91
CAPN2-208ENST00000483579 FANCD2Q9BXW9 1451 aa39.46■■■■□ 3.91
CAPN2-208ENST00000483579 CEP164Q9UPV0 1460 aa39.46■■■■□ 3.91
CAPN2-208ENST00000483579 PRDM2Q13029 1718 aa39.4■■■■□ 3.9
CAPN2-208ENST00000483579 WDR62O43379 1518 aa39.35■■■■□ 3.89
CAPN2-208ENST00000483579 DNAJC5Q9H3Z4 198 aa39.17■■■■□ 3.86
CAPN2-208ENST00000483579 URB2Q14146 1524 aaKnown RBP39.09■■■■□ 3.85
CAPN2-208ENST00000483579 SUPT5HO00267 1087 aaKnown RBP38.99■■■■□ 3.83
CAPN2-208ENST00000483579 TOPBP1Q92547 1522 aa38.79■■■■□ 3.8
CAPN2-208ENST00000483579 ABCC8Q09428 1581 aa38.73■■■■□ 3.79
CAPN2-208ENST00000483579 DNMBPQ6XZF7 1577 aa38.72■■■■□ 3.79
CAPN2-208ENST00000483579 IFT140Q96RY7 1462 aa38.62■■■■□ 3.77
CAPN2-208ENST00000483579 ZNF608Q9ULD9 1512 aaPredicted RBP38.51■■■■□ 3.76
CAPN2-208ENST00000483579 POLA1P09884 1462 aaPredicted RBP38.43■■■■□ 3.74
CAPN2-208ENST00000483579 TARBP1Q13395 1621 aaKnown RBP38.41■■■■□ 3.74
CAPN2-208ENST00000483579 EIF4G3O43432 1585 aaKnown RBP38.38■■■■□ 3.73
CAPN2-208ENST00000483579 CUX1P39880 1505 aa38.36■■■■□ 3.73
CAPN2-208ENST00000483579 FGD5Q6ZNL6 1462 aa38.29■■■■□ 3.72
CAPN2-208ENST00000483579 RAD54L2Q9Y4B4 1467 aa38.28■■■■□ 3.72
CAPN2-208ENST00000483579 SOGA1O94964 1423 aa38.26■■■■□ 3.72
CAPN2-208ENST00000483579 AQRO60306 1485 aaKnown RBP eCLIP38.24■■■■□ 3.712e-7■■■□□ 18.5
CAPN2-208ENST00000483579 OSCARQ8IYS5 282 aa38.23■■■■□ 3.71
CAPN2-208ENST00000483579 TDRD9Q8NDG6 1382 aaKnown RBP38.1■■■■□ 3.69
CAPN2-208ENST00000483579 WDR97A6NE52 1622 aa38.05■■■■□ 3.68
CAPN2-208ENST00000483579 CHD1O14646 1710 aa38.04■■■■□ 3.68
CAPN2-208ENST00000483579 BIVM-ERCC5R4GMW8 1640 aa37.95■■■■□ 3.67
CAPN2-208ENST00000483579 WRNQ14191 1432 aaPredicted RBP eCLIP37.95■■■■□ 3.67
CAPN2-208ENST00000483579 TOP2BQ02880 1626 aa37.94■■■■□ 3.66
CAPN2-208ENST00000483579 SYNJ1O43426 1573 aa37.93■■■■□ 3.66
CAPN2-208ENST00000483579 FBLN2P98095 1184 aa37.9■■■■□ 3.66
CAPN2-208ENST00000483579 SNAPC4Q5SXM2 1469 aa37.89■■■■□ 3.66
CAPN2-208ENST00000483579 ABCA10Q8WWZ4 1543 aa37.87■■■■□ 3.65
CAPN2-208ENST00000483579 PBRM1Q86U86 1689 aa37.86■■■■□ 3.65
CAPN2-208ENST00000483579 GRIN2BQ13224 1484 aa37.85■■■■□ 3.65
CAPN2-208ENST00000483579 GAPVD1Q14C86 1478 aa37.82■■■■□ 3.64
CAPN2-208ENST00000483579 TRIM41Q8WV44 630 aa37.81■■■■□ 3.64
CAPN2-208ENST00000483579 ABCA5Q8WWZ7 1642 aa37.79■■■■□ 3.64
CAPN2-208ENST00000483579 MAGI1Q96QZ7 1491 aaPredicted RBP37.79■■■■□ 3.64
CAPN2-208ENST00000483579 RIMBP3CA6NJZ7 1639 aa37.73■■■■□ 3.63
CAPN2-208ENST00000483579 RIMBP3BA6NNM3 1639 aa37.73■■■■□ 3.63
CAPN2-208ENST00000483579 RIMBP3Q9UFD9 1639 aa37.73■■■■□ 3.63
CAPN2-208ENST00000483579 CHMP7Q8WUX9 453 aaPredicted RBP37.7■■■■□ 3.63
CAPN2-208ENST00000483579 SYNJ2O15056 1496 aa37.66■■■■□ 3.62
CAPN2-208ENST00000483579 ARHGEF11O15085 1522 aa37.64■■■■□ 3.62
CAPN2-208ENST00000483579 CLASP1Q7Z460 1538 aa37.51■■■■□ 3.59
CAPN2-208ENST00000483579 ADAMTS12P58397 1594 aa37.46■■■■□ 3.59
CAPN2-208ENST00000483579 ERICH3Q5RHP9 1530 aa37.42■■■■□ 3.58
CAPN2-208ENST00000483579 GRIN2AQ12879 1464 aa37.38■■■■□ 3.57
CAPN2-208ENST00000483579 FHAD1B1AJZ9 1412 aa37.35■■■■□ 3.57
CAPN2-208ENST00000483579 CYB5RLQ6IPT4 315 aa37.32■■■■□ 3.56
CAPN2-208ENST00000483579 ARAP1Q96P48 1450 aa37.31■■■■□ 3.56
CAPN2-208ENST00000483579 CEP170Q5SW79 1584 aa37.24■■■■□ 3.55
CAPN2-208ENST00000483579 NUP160Q12769 1436 aa37.19■■■■□ 3.54
CAPN2-208ENST00000483579 KIF27Q86VH2 1401 aa37.18■■■■□ 3.54
CAPN2-208ENST00000483579 CUL7Q14999 1698 aa37.05■■■■□ 3.52
CAPN2-208ENST00000483579 IGF1RP08069 1367 aa37.05■■■■□ 3.52
CAPN2-208ENST00000483579 SHROOM2Q13796 1616 aa37■■■■□ 3.51
CAPN2-208ENST00000483579 ERCC6L2Q5T890 1561 aa37■■■■□ 3.51
CAPN2-208ENST00000483579 RUSC2Q8N2Y8 1516 aa36.93■■■■□ 3.5
CAPN2-208ENST00000483579 CARMIL1Q5VZK9 1371 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms