RNA–Protein interactions for RNA: ENST00000483525.2

SAMMSON-201, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

TSL 1 (best)

Gene SAMMSON, Length 2,055 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-201ENST00000483525 NISCHQ9Y2I1 1504 aa24.93■■□□□ 1.58
SAMMSON-201ENST00000483525 CCDC180Q9P1Z9 1646 aa21.64■■□□□ 1.06
SAMMSON-201ENST00000483525 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
SAMMSON-201ENST00000483525 DCAF1Q9Y4B6 1507 aa20.62■□□□□ 0.89
SAMMSON-201ENST00000483525 DCAF8L2P0C7V8 631 aa20.49■□□□□ 0.87
SAMMSON-201ENST00000483525 SHROOM4Q9ULL8 1493 aa20.41■□□□□ 0.86
SAMMSON-201ENST00000483525 ABCC9O60706 1549 aa20.32■□□□□ 0.84
SAMMSON-201ENST00000483525 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
SAMMSON-201ENST00000483525 NACADO15069 1562 aa20.12■□□□□ 0.81
SAMMSON-201ENST00000483525 SCRIBQ14160 1630 aa19.92■□□□□ 0.78
SAMMSON-201ENST00000483525 RB1CC1Q8TDY2 1594 aa19.9■□□□□ 0.78
SAMMSON-201ENST00000483525 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
SAMMSON-201ENST00000483525 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
SAMMSON-201ENST00000483525 RSF1Q96T23 1441 aaPredicted RBP19.41■□□□□ 0.7
SAMMSON-201ENST00000483525 CECR2Q9BXF3 1484 aa19.37■□□□□ 0.69
SAMMSON-201ENST00000483525 BICRAQ9NZM4 1560 aa19.34■□□□□ 0.69
SAMMSON-201ENST00000483525 MROH2BQ7Z745 1585 aa19.27■□□□□ 0.67
SAMMSON-201ENST00000483525 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
SAMMSON-201ENST00000483525 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
SAMMSON-201ENST00000483525 SMARCA4P51532 1647 aa19.12■□□□□ 0.65
SAMMSON-201ENST00000483525 WIZO95785 1651 aa19.12■□□□□ 0.65
SAMMSON-201ENST00000483525 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
SAMMSON-201ENST00000483525 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
SAMMSON-201ENST00000483525 PEG3Q9GZU2 1588 aa18.9■□□□□ 0.62
SAMMSON-201ENST00000483525 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
SAMMSON-201ENST00000483525 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
SAMMSON-201ENST00000483525 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
SAMMSON-201ENST00000483525 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
SAMMSON-201ENST00000483525 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
SAMMSON-201ENST00000483525 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
SAMMSON-201ENST00000483525 HMGXB3Q12766 1538 aa18.57■□□□□ 0.56
SAMMSON-201ENST00000483525 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
SAMMSON-201ENST00000483525 CC2D2AQ9P2K1 1620 aa18.41■□□□□ 0.54
SAMMSON-201ENST00000483525 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
SAMMSON-201ENST00000483525 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
SAMMSON-201ENST00000483525 WRNQ14191 1432 aaPredicted RBP eCLIP18.24■□□□□ 0.51
SAMMSON-201ENST00000483525 CFTRP13569 1480 aa18.22■□□□□ 0.51
SAMMSON-201ENST00000483525 FAM9AQ8IZU1 332 aaPredicted RBP18.19■□□□□ 0.5
SAMMSON-201ENST00000483525 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
SAMMSON-201ENST00000483525 PRDM2Q13029 1718 aa18.13■□□□□ 0.49
SAMMSON-201ENST00000483525 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
SAMMSON-201ENST00000483525 TOP2BQ02880 1626 aa18.08■□□□□ 0.49
SAMMSON-201ENST00000483525 SOGA1O94964 1423 aa18.08■□□□□ 0.48
SAMMSON-201ENST00000483525 BIVM-ERCC5R4GMW8 1640 aa18.06■□□□□ 0.48
SAMMSON-201ENST00000483525 EEA1Q15075 1411 aa18.06■□□□□ 0.48
SAMMSON-201ENST00000483525 RUSC2Q8N2Y8 1516 aa18.01■□□□□ 0.47
SAMMSON-201ENST00000483525 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
SAMMSON-201ENST00000483525 CUX1P39880 1505 aa18■□□□□ 0.47
SAMMSON-201ENST00000483525 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
SAMMSON-201ENST00000483525 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
SAMMSON-201ENST00000483525 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
SAMMSON-201ENST00000483525 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
SAMMSON-201ENST00000483525 NESP48681 1621 aa17.91■□□□□ 0.46
SAMMSON-201ENST00000483525 FANCD2Q9BXW9 1451 aa17.9■□□□□ 0.46
SAMMSON-201ENST00000483525 KIF21BO75037 1637 aa17.82■□□□□ 0.44
SAMMSON-201ENST00000483525 GOLGA3Q08378 1498 aa17.81■□□□□ 0.44
SAMMSON-201ENST00000483525 TNIKQ9UKE5 1360 aa17.81■□□□□ 0.44
SAMMSON-201ENST00000483525 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
SAMMSON-201ENST00000483525 DNMBPQ6XZF7 1577 aa17.77■□□□□ 0.44
SAMMSON-201ENST00000483525 FGD5Q6ZNL6 1462 aa17.77■□□□□ 0.43
SAMMSON-201ENST00000483525 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
SAMMSON-201ENST00000483525 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
SAMMSON-201ENST00000483525 KIF27Q86VH2 1401 aa17.76■□□□□ 0.43
SAMMSON-201ENST00000483525 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
SAMMSON-201ENST00000483525 UBTFP17480 764 aaKnown RBP17.71■□□□□ 0.43
SAMMSON-201ENST00000483525 CEP162Q5TB80 1403 aa17.71■□□□□ 0.43
SAMMSON-201ENST00000483525 PRXQ9BXM0 1461 aa17.71■□□□□ 0.43
SAMMSON-201ENST00000483525 RAPGEF2Q9Y4G8 1499 aa17.7■□□□□ 0.42
SAMMSON-201ENST00000483525 KIF21AQ7Z4S6 1674 aa17.69■□□□□ 0.42
SAMMSON-201ENST00000483525 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
SAMMSON-201ENST00000483525 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
SAMMSON-201ENST00000483525 CUX2O14529 1486 aa17.67■□□□□ 0.42
SAMMSON-201ENST00000483525 POLA1P09884 1462 aaPredicted RBP17.67■□□□□ 0.42
SAMMSON-201ENST00000483525 ABCA10Q8WWZ4 1543 aa17.63■□□□□ 0.41
SAMMSON-201ENST00000483525 RAD54L2Q9Y4B4 1467 aa17.61■□□□□ 0.41
SAMMSON-201ENST00000483525 IGF1RP08069 1367 aa17.61■□□□□ 0.41
SAMMSON-201ENST00000483525 PCGF6Q9BYE7 350 aa17.59■□□□□ 0.41
SAMMSON-201ENST00000483525 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
SAMMSON-201ENST00000483525 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
SAMMSON-201ENST00000483525 CLIP1P30622 1438 aa17.53■□□□□ 0.4
SAMMSON-201ENST00000483525 MRC2Q9UBG0 1479 aa17.52■□□□□ 0.4
SAMMSON-201ENST00000483525 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
SAMMSON-201ENST00000483525 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
SAMMSON-201ENST00000483525 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.39
SAMMSON-201ENST00000483525 WDR62O43379 1518 aa17.44■□□□□ 0.38
SAMMSON-201ENST00000483525 CUL7Q14999 1698 aa17.44■□□□□ 0.38
SAMMSON-201ENST00000483525 TDRD9Q8NDG6 1382 aaKnown RBP17.42■□□□□ 0.38
SAMMSON-201ENST00000483525 GAPVD1Q14C86 1478 aa17.42■□□□□ 0.38
SAMMSON-201ENST00000483525 VPS8Q8N3P4 1428 aa17.41■□□□□ 0.38
SAMMSON-201ENST00000483525 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
SAMMSON-201ENST00000483525 PPARGC1BQ86YN6 1023 aaKnown RBP17.37■□□□□ 0.37
SAMMSON-201ENST00000483525 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
SAMMSON-201ENST00000483525 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
SAMMSON-201ENST00000483525 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
SAMMSON-201ENST00000483525 IFT140Q96RY7 1462 aa17.34■□□□□ 0.37
SAMMSON-201ENST00000483525 ARHGAP35Q9NRY4 1499 aa17.33■□□□□ 0.36
SAMMSON-201ENST00000483525 PBRM1Q86U86 1689 aa17.31■□□□□ 0.36
SAMMSON-201ENST00000483525 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.36
SAMMSON-201ENST00000483525 CTTNBP2Q8WZ74 1663 aa17.27■□□□□ 0.36
SAMMSON-201ENST00000483525 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms