RNA–Protein interactions for RNA: ENST00000483490.1

GFI1-204, Transcript of growth factor independent 1 transcriptional repressor, humanhuman

TSL 2

Gene GFI1, Length 508 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1-204ENST00000483490 NISCHQ9Y2I1 1504 aa40.22■■■■■ 4.03
GFI1-204ENST00000483490 CCDC180Q9P1Z9 1646 aa35.96■■■■□ 3.35
GFI1-204ENST00000483490 ABCC9O60706 1549 aa35.45■■■■□ 3.27
GFI1-204ENST00000483490 RB1CC1Q8TDY2 1594 aa34.04■■■■□ 3.04
GFI1-204ENST00000483490 NACADO15069 1562 aa33.91■■■■□ 3.02
GFI1-204ENST00000483490 DCAF8L2P0C7V8 631 aa33.82■■■■□ 3
GFI1-204ENST00000483490 MYO15BQ96JP2 1530 aa33.59■■■□□ 2.97
GFI1-204ENST00000483490 ZCCHC6Q5VYS8 1495 aaKnown RBP33.43■■■□□ 2.94
GFI1-204ENST00000483490 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
GFI1-204ENST00000483490 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
GFI1-204ENST00000483490 PABPN1Q86U42 306 aaKnown RBP eCLIP33.05■■■□□ 2.88
GFI1-204ENST00000483490 BICRAQ9NZM4 1560 aa32.85■■■□□ 2.85
GFI1-204ENST00000483490 SCRIBQ14160 1630 aa32.73■■■□□ 2.83
GFI1-204ENST00000483490 DNAJC5BQ9UF47 199 aa32.7■■■□□ 2.83
GFI1-204ENST00000483490 SHROOM4Q9ULL8 1493 aa32.69■■■□□ 2.82
GFI1-204ENST00000483490 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
GFI1-204ENST00000483490 CC2D2AQ9P2K1 1620 aa32.05■■■□□ 2.72
GFI1-204ENST00000483490 CECR2Q9BXF3 1484 aa31.93■■■□□ 2.7
GFI1-204ENST00000483490 SMARCA4P51532 1647 aa31.28■■■□□ 2.6
GFI1-204ENST00000483490 BAZ1AQ9NRL2 1556 aaPredicted RBP31.26■■■□□ 2.6
GFI1-204ENST00000483490 NCAPD3P42695 1498 aa31.25■■■□□ 2.59
GFI1-204ENST00000483490 SMARCA2P51531 1590 aa31.22■■■□□ 2.59
GFI1-204ENST00000483490 ATAD2BQ9ULI0 1458 aa31.2■■■□□ 2.58
GFI1-204ENST00000483490 HMGXB3Q12766 1538 aa31.09■■■□□ 2.57
GFI1-204ENST00000483490 BAZ1BQ9UIG0 1483 aaKnown RBP30.99■■■□□ 2.55
GFI1-204ENST00000483490 PEG3Q9GZU2 1588 aa30.99■■■□□ 2.55
GFI1-204ENST00000483490 MROH2BQ7Z745 1585 aa30.94■■■□□ 2.54
GFI1-204ENST00000483490 ERCC6Q03468 1493 aa30.7■■■□□ 2.5
GFI1-204ENST00000483490 WIZO95785 1651 aa30.59■■■□□ 2.49
GFI1-204ENST00000483490 LAMC3Q9Y6N6 1575 aa30.52■■■□□ 2.48
GFI1-204ENST00000483490 NESP48681 1621 aa30.51■■■□□ 2.48
GFI1-204ENST00000483490 RSF1Q96T23 1441 aaPredicted RBP30.49■■■□□ 2.47
GFI1-204ENST00000483490 CUX2O14529 1486 aa30.47■■■□□ 2.47
GFI1-204ENST00000483490 PDS5BQ9NTI5 1447 aa30.38■■■□□ 2.45
GFI1-204ENST00000483490 CADPSQ9ULU8 1353 aa30.34■■■□□ 2.45
GFI1-204ENST00000483490 TOP2AP11388 1531 aaKnown RBP30.32■■■□□ 2.44
GFI1-204ENST00000483490 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
GFI1-204ENST00000483490 THOC2Q8NI27 1593 aaKnown RBP30.16■■■□□ 2.42
GFI1-204ENST00000483490 CFTRP13569 1480 aa30.06■■■□□ 2.4
GFI1-204ENST00000483490 MRC2Q9UBG0 1479 aa30.03■■■□□ 2.4
GFI1-204ENST00000483490 CEP164Q9UPV0 1460 aa30.02■■■□□ 2.4
GFI1-204ENST00000483490 FANCD2Q9BXW9 1451 aa29.99■■■□□ 2.39
GFI1-204ENST00000483490 CCDC88BA6NC98 1476 aa29.93■■■□□ 2.38
GFI1-204ENST00000483490 WDR62O43379 1518 aa29.91■■■□□ 2.38
GFI1-204ENST00000483490 DNAJC5Q9H3Z4 198 aa29.86■■■□□ 2.37
GFI1-204ENST00000483490 PRDM2Q13029 1718 aa29.82■■■□□ 2.36
GFI1-204ENST00000483490 URB2Q14146 1524 aaKnown RBP29.64■■■□□ 2.34
GFI1-204ENST00000483490 ABCC8Q09428 1581 aa29.55■■■□□ 2.32
GFI1-204ENST00000483490 SUPT5HO00267 1087 aaKnown RBP29.53■■■□□ 2.32
GFI1-204ENST00000483490 TOPBP1Q92547 1522 aa29.45■■■□□ 2.3
GFI1-204ENST00000483490 DNMBPQ6XZF7 1577 aa29.42■■■□□ 2.3
GFI1-204ENST00000483490 IFT140Q96RY7 1462 aa29.41■■■□□ 2.3
GFI1-204ENST00000483490 ZNF608Q9ULD9 1512 aaPredicted RBP29.19■■■□□ 2.26
GFI1-204ENST00000483490 POLA1P09884 1462 aaPredicted RBP29.17■■■□□ 2.26
GFI1-204ENST00000483490 OSCARQ8IYS5 282 aa29.16■■■□□ 2.26
GFI1-204ENST00000483490 EIF4G3O43432 1585 aaKnown RBP29.11■■■□□ 2.25
GFI1-204ENST00000483490 TARBP1Q13395 1621 aaKnown RBP29.11■■■□□ 2.25
GFI1-204ENST00000483490 SOGA1O94964 1423 aa29.09■■■□□ 2.25
GFI1-204ENST00000483490 CUX1P39880 1505 aa29.06■■■□□ 2.24
GFI1-204ENST00000483490 FGD5Q6ZNL6 1462 aa29.06■■■□□ 2.24
GFI1-204ENST00000483490 AQRO60306 1485 aaKnown RBP eCLIP29.01■■■□□ 2.23
GFI1-204ENST00000483490 RAD54L2Q9Y4B4 1467 aa29.01■■■□□ 2.23
GFI1-204ENST00000483490 WDR97A6NE52 1622 aa29.01■■■□□ 2.23
GFI1-204ENST00000483490 TDRD9Q8NDG6 1382 aaKnown RBP28.92■■■□□ 2.22
GFI1-204ENST00000483490 FBLN2P98095 1184 aa28.84■■■□□ 2.21
GFI1-204ENST00000483490 WRNQ14191 1432 aaPredicted RBP eCLIP28.83■■■□□ 2.21
GFI1-204ENST00000483490 GRIN2BQ13224 1484 aa28.81■■■□□ 2.2
GFI1-204ENST00000483490 ABCA10Q8WWZ4 1543 aa28.79■■■□□ 2.2
GFI1-204ENST00000483490 CHD1O14646 1710 aa28.78■■■□□ 2.2
GFI1-204ENST00000483490 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
GFI1-204ENST00000483490 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
GFI1-204ENST00000483490 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
GFI1-204ENST00000483490 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
GFI1-204ENST00000483490 BIVM-ERCC5R4GMW8 1640 aa28.76■■■□□ 2.19
GFI1-204ENST00000483490 GAPVD1Q14C86 1478 aa28.75■■■□□ 2.19
GFI1-204ENST00000483490 CHMP7Q8WUX9 453 aaPredicted RBP28.72■■■□□ 2.19
GFI1-204ENST00000483490 SYNJ1O43426 1573 aa28.69■■■□□ 2.18
GFI1-204ENST00000483490 PBRM1Q86U86 1689 aa28.67■■■□□ 2.18
GFI1-204ENST00000483490 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
GFI1-204ENST00000483490 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
GFI1-204ENST00000483490 RIMBP3CA6NJZ7 1639 aa28.63■■■□□ 2.17
GFI1-204ENST00000483490 RIMBP3BA6NNM3 1639 aa28.63■■■□□ 2.17
GFI1-204ENST00000483490 RIMBP3Q9UFD9 1639 aa28.63■■■□□ 2.17
GFI1-204ENST00000483490 ARHGEF11O15085 1522 aa28.61■■■□□ 2.17
GFI1-204ENST00000483490 CLASP1Q7Z460 1538 aa28.47■■■□□ 2.15
GFI1-204ENST00000483490 ERICH3Q5RHP9 1530 aa28.46■■■□□ 2.15
GFI1-204ENST00000483490 ADAMTS12P58397 1594 aa28.43■■■□□ 2.14
GFI1-204ENST00000483490 FHAD1B1AJZ9 1412 aa28.43■■■□□ 2.14
GFI1-204ENST00000483490 GRIN2AQ12879 1464 aa28.4■■■□□ 2.14
GFI1-204ENST00000483490 CYB5RLQ6IPT4 315 aa28.39■■■□□ 2.14
GFI1-204ENST00000483490 ARAP1Q96P48 1450 aa28.33■■■□□ 2.13
GFI1-204ENST00000483490 KIF27Q86VH2 1401 aa28.3■■■□□ 2.12
GFI1-204ENST00000483490 NUP160Q12769 1436 aa28.27■■■□□ 2.12
GFI1-204ENST00000483490 CEP170Q5SW79 1584 aa28.22■■■□□ 2.11
GFI1-204ENST00000483490 CUL7Q14999 1698 aa28.16■■■□□ 2.1
GFI1-204ENST00000483490 IGF1RP08069 1367 aa28.13■■■□□ 2.09
GFI1-204ENST00000483490 SHROOM2Q13796 1616 aa28.07■■■□□ 2.08
GFI1-204ENST00000483490 JPH4Q96JJ6 628 aa28.02■■■□□ 2.08
GFI1-204ENST00000483490 CARMIL1Q5VZK9 1371 aa28.01■■■□□ 2.07
GFI1-204ENST00000483490 RUSC2Q8N2Y8 1516 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms