RNA–Protein interactions for RNA: ENST00000483454.1

PCOLCE2-206, Transcript of procollagen C-endopeptidase enhancer 2, humanhuman

TSL 2

Gene PCOLCE2, Length 666 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE2-206ENST00000483454 NISCHQ9Y2I1 1504 aa31.23■■■□□ 2.59
PCOLCE2-206ENST00000483454 CCDC180Q9P1Z9 1646 aa28.24■■■□□ 2.11
PCOLCE2-206ENST00000483454 ABCC9O60706 1549 aa28.21■■■□□ 2.11
PCOLCE2-206ENST00000483454 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
PCOLCE2-206ENST00000483454 NACADO15069 1562 aa26.63■■□□□ 1.85
PCOLCE2-206ENST00000483454 DNAJC5BQ9UF47 199 aa26.49■■□□□ 1.83
PCOLCE2-206ENST00000483454 UNC13AQ9UPW8 1703 aa26.44■■□□□ 1.82
PCOLCE2-206ENST00000483454 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
PCOLCE2-206ENST00000483454 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
PCOLCE2-206ENST00000483454 PABPN1Q86U42 306 aaKnown RBP eCLIP26.16■■□□□ 1.78
PCOLCE2-206ENST00000483454 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.77
PCOLCE2-206ENST00000483454 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
PCOLCE2-206ENST00000483454 DCAF1Q9Y4B6 1507 aa25.81■■□□□ 1.72
PCOLCE2-206ENST00000483454 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
PCOLCE2-206ENST00000483454 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
PCOLCE2-206ENST00000483454 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
PCOLCE2-206ENST00000483454 EIF4G1Q04637 1599 aaKnown RBP25.45■■□□□ 1.66
PCOLCE2-206ENST00000483454 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
PCOLCE2-206ENST00000483454 NCAPD3P42695 1498 aa24.52■■□□□ 1.52
PCOLCE2-206ENST00000483454 DNAJC5Q9H3Z4 198 aa24.47■■□□□ 1.51
PCOLCE2-206ENST00000483454 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
PCOLCE2-206ENST00000483454 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
PCOLCE2-206ENST00000483454 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
PCOLCE2-206ENST00000483454 CUX2O14529 1486 aa24.42■■□□□ 1.5
PCOLCE2-206ENST00000483454 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
PCOLCE2-206ENST00000483454 ERCC6Q03468 1493 aa24.39■■□□□ 1.5
PCOLCE2-206ENST00000483454 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
PCOLCE2-206ENST00000483454 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
PCOLCE2-206ENST00000483454 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.47
PCOLCE2-206ENST00000483454 NESP48681 1621 aa24.2■■□□□ 1.46
PCOLCE2-206ENST00000483454 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.45
PCOLCE2-206ENST00000483454 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.45
PCOLCE2-206ENST00000483454 KIF21AQ7Z4S6 1674 aa24.05■■□□□ 1.44
PCOLCE2-206ENST00000483454 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
PCOLCE2-206ENST00000483454 PDS5BQ9NTI5 1447 aa23.86■■□□□ 1.41
PCOLCE2-206ENST00000483454 WIZO95785 1651 aa23.83■■□□□ 1.41
PCOLCE2-206ENST00000483454 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
PCOLCE2-206ENST00000483454 MRC2Q9UBG0 1479 aa23.7■■□□□ 1.38
PCOLCE2-206ENST00000483454 WDR62O43379 1518 aa23.68■■□□□ 1.38
PCOLCE2-206ENST00000483454 CEP164Q9UPV0 1460 aa23.58■■□□□ 1.37
PCOLCE2-206ENST00000483454 FANCD2Q9BXW9 1451 aa23.51■■□□□ 1.35
PCOLCE2-206ENST00000483454 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
PCOLCE2-206ENST00000483454 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
PCOLCE2-206ENST00000483454 CFTRP13569 1480 aa23.47■■□□□ 1.35
PCOLCE2-206ENST00000483454 RSF1Q96T23 1441 aaPredicted RBP23.45■■□□□ 1.34
PCOLCE2-206ENST00000483454 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
PCOLCE2-206ENST00000483454 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.33
PCOLCE2-206ENST00000483454 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
PCOLCE2-206ENST00000483454 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
PCOLCE2-206ENST00000483454 IFT140Q96RY7 1462 aa23.1■■□□□ 1.29
PCOLCE2-206ENST00000483454 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
PCOLCE2-206ENST00000483454 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
PCOLCE2-206ENST00000483454 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
PCOLCE2-206ENST00000483454 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
PCOLCE2-206ENST00000483454 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
PCOLCE2-206ENST00000483454 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
PCOLCE2-206ENST00000483454 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
PCOLCE2-206ENST00000483454 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
PCOLCE2-206ENST00000483454 CHD1O14646 1710 aa22.96■■□□□ 1.27
PCOLCE2-206ENST00000483454 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
PCOLCE2-206ENST00000483454 ARHGEF11O15085 1522 aa22.9■■□□□ 1.26
PCOLCE2-206ENST00000483454 POLA1P09884 1462 aaPredicted RBP22.81■■□□□ 1.24
PCOLCE2-206ENST00000483454 AQRO60306 1485 aaKnown RBP eCLIP22.8■■□□□ 1.24
PCOLCE2-206ENST00000483454 WDR97A6NE52 1622 aa22.73■■□□□ 1.23
PCOLCE2-206ENST00000483454 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
PCOLCE2-206ENST00000483454 SOGA1O94964 1423 aa22.66■■□□□ 1.22
PCOLCE2-206ENST00000483454 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
PCOLCE2-206ENST00000483454 FBLN2P98095 1184 aa22.65■■□□□ 1.22
PCOLCE2-206ENST00000483454 ARAP1Q96P48 1450 aa22.65■■□□□ 1.22
PCOLCE2-206ENST00000483454 CYB5RLQ6IPT4 315 aa22.64■■□□□ 1.21
PCOLCE2-206ENST00000483454 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
PCOLCE2-206ENST00000483454 CUX1P39880 1505 aa22.62■■□□□ 1.21
PCOLCE2-206ENST00000483454 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
PCOLCE2-206ENST00000483454 PBRM1Q86U86 1689 aa22.6■■□□□ 1.21
PCOLCE2-206ENST00000483454 SYNJ1O43426 1573 aa22.58■■□□□ 1.2
PCOLCE2-206ENST00000483454 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
PCOLCE2-206ENST00000483454 MAGI1Q96QZ7 1491 aaPredicted RBP22.57■■□□□ 1.2
PCOLCE2-206ENST00000483454 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
PCOLCE2-206ENST00000483454 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
PCOLCE2-206ENST00000483454 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
PCOLCE2-206ENST00000483454 TRHP20396 242 aaPredicted RBP22.46■■□□□ 1.19
PCOLCE2-206ENST00000483454 ABCA5Q8WWZ7 1642 aa22.44■■□□□ 1.18
PCOLCE2-206ENST00000483454 GAPVD1Q14C86 1478 aa22.42■■□□□ 1.18
PCOLCE2-206ENST00000483454 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.17
PCOLCE2-206ENST00000483454 BIVM-ERCC5R4GMW8 1640 aa22.31■■□□□ 1.16
PCOLCE2-206ENST00000483454 ADAMTS12P58397 1594 aa22.28■■□□□ 1.16
PCOLCE2-206ENST00000483454 TOP2BQ02880 1626 aa22.27■■□□□ 1.16
PCOLCE2-206ENST00000483454 GRIN2AQ12879 1464 aa22.25■■□□□ 1.15
PCOLCE2-206ENST00000483454 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
PCOLCE2-206ENST00000483454 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
PCOLCE2-206ENST00000483454 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
PCOLCE2-206ENST00000483454 ERCC6L2Q5T890 1561 aa22.19■■□□□ 1.14
PCOLCE2-206ENST00000483454 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
PCOLCE2-206ENST00000483454 NUP160Q12769 1436 aa22.16■■□□□ 1.14
PCOLCE2-206ENST00000483454 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
PCOLCE2-206ENST00000483454 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
PCOLCE2-206ENST00000483454 KIF13AQ9H1H9 1805 aa22.05■■□□□ 1.12
PCOLCE2-206ENST00000483454 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
PCOLCE2-206ENST00000483454 AEBP2Q6ZN18 517 aaPredicted RBP21.93■■□□□ 1.1
PCOLCE2-206ENST00000483454 PRG4Q92954 1404 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms