RNA–Protein interactions for RNA: ENST00000483447.1

CXorf40B-206, Transcript of chromosome X open reading frame 40B, humanhuman

TSL 5

Gene CXorf40B, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40B-206ENST00000483447 NISCHQ9Y2I1 1504 aa38.79■■■■□ 3.8
CXorf40B-206ENST00000483447 CCDC180Q9P1Z9 1646 aa34.79■■■■□ 3.16
CXorf40B-206ENST00000483447 ABCC9O60706 1549 aa34.37■■■■□ 3.09
CXorf40B-206ENST00000483447 DNAJC5BQ9UF47 199 aa33.32■■■□□ 2.92
CXorf40B-206ENST00000483447 RB1CC1Q8TDY2 1594 aa32.89■■■□□ 2.86
CXorf40B-206ENST00000483447 NACADO15069 1562 aa32.72■■■□□ 2.83
CXorf40B-206ENST00000483447 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
CXorf40B-206ENST00000483447 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
CXorf40B-206ENST00000483447 UNC13AQ9UPW8 1703 aa32.28■■■□□ 2.76
CXorf40B-206ENST00000483447 ZCCHC6Q5VYS8 1495 aaKnown RBP32.26■■■□□ 2.75
CXorf40B-206ENST00000483447 DCAF1Q9Y4B6 1507 aa32.08■■■□□ 2.73
CXorf40B-206ENST00000483447 BICRAQ9NZM4 1560 aa31.95■■■□□ 2.71
CXorf40B-206ENST00000483447 PABPN1Q86U42 306 aaKnown RBP eCLIP31.95■■■□□ 2.71
CXorf40B-206ENST00000483447 SCRIBQ14160 1630 aa31.68■■■□□ 2.66
CXorf40B-206ENST00000483447 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
CXorf40B-206ENST00000483447 DNAJC5Q9H3Z4 198 aa31.4■■■□□ 2.62
CXorf40B-206ENST00000483447 EIF4G1Q04637 1599 aaKnown RBP31.13■■■□□ 2.57
CXorf40B-206ENST00000483447 CC2D2AQ9P2K1 1620 aa31.12■■■□□ 2.57
CXorf40B-206ENST00000483447 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
CXorf40B-206ENST00000483447 SMARCA4P51532 1647 aa30.25■■■□□ 2.43
CXorf40B-206ENST00000483447 NCAPD3P42695 1498 aa30.15■■■□□ 2.42
CXorf40B-206ENST00000483447 ATAD2BQ9ULI0 1458 aa30.13■■■□□ 2.41
CXorf40B-206ENST00000483447 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
CXorf40B-206ENST00000483447 SMARCA2P51531 1590 aa30.09■■■□□ 2.41
CXorf40B-206ENST00000483447 HMGXB3Q12766 1538 aa30.05■■■□□ 2.4
CXorf40B-206ENST00000483447 CUX2O14529 1486 aa30.04■■■□□ 2.4
CXorf40B-206ENST00000483447 PEG3Q9GZU2 1588 aa29.95■■■□□ 2.39
CXorf40B-206ENST00000483447 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
CXorf40B-206ENST00000483447 BAZ1BQ9UIG0 1483 aaKnown RBP29.87■■■□□ 2.37
CXorf40B-206ENST00000483447 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
CXorf40B-206ENST00000483447 NESP48681 1621 aa29.63■■■□□ 2.33
CXorf40B-206ENST00000483447 WIZO95785 1651 aa29.6■■■□□ 2.33
CXorf40B-206ENST00000483447 TRIM41Q8WV44 630 aa29.54■■■□□ 2.32
CXorf40B-206ENST00000483447 LAMC3Q9Y6N6 1575 aa29.5■■■□□ 2.31
CXorf40B-206ENST00000483447 KIF21AQ7Z4S6 1674 aa29.37■■■□□ 2.29
CXorf40B-206ENST00000483447 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
CXorf40B-206ENST00000483447 RSF1Q96T23 1441 aaPredicted RBP29.35■■■□□ 2.29
CXorf40B-206ENST00000483447 TOP2AP11388 1531 aaKnown RBP29.25■■■□□ 2.27
CXorf40B-206ENST00000483447 PDS5BQ9NTI5 1447 aa29.23■■■□□ 2.27
CXorf40B-206ENST00000483447 CADPSQ9ULU8 1353 aa29.23■■■□□ 2.27
CXorf40B-206ENST00000483447 MRC2Q9UBG0 1479 aa29.03■■■□□ 2.24
CXorf40B-206ENST00000483447 CFTRP13569 1480 aa29■■■□□ 2.23
CXorf40B-206ENST00000483447 WDR62O43379 1518 aa28.98■■■□□ 2.23
CXorf40B-206ENST00000483447 CEP164Q9UPV0 1460 aa28.97■■■□□ 2.23
CXorf40B-206ENST00000483447 FANCD2Q9BXW9 1451 aa28.95■■■□□ 2.22
CXorf40B-206ENST00000483447 PRDM2Q13029 1718 aa28.93■■■□□ 2.22
CXorf40B-206ENST00000483447 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
CXorf40B-206ENST00000483447 URB2Q14146 1524 aaKnown RBP28.72■■■□□ 2.19
CXorf40B-206ENST00000483447 OSCARQ8IYS5 282 aa28.68■■■□□ 2.18
CXorf40B-206ENST00000483447 TOPBP1Q92547 1522 aa28.46■■■□□ 2.15
CXorf40B-206ENST00000483447 DNMBPQ6XZF7 1577 aa28.41■■■□□ 2.14
CXorf40B-206ENST00000483447 ABCC8Q09428 1581 aa28.36■■■□□ 2.13
CXorf40B-206ENST00000483447 IFT140Q96RY7 1462 aa28.35■■■□□ 2.13
CXorf40B-206ENST00000483447 ZNF608Q9ULD9 1512 aaPredicted RBP28.3■■■□□ 2.12
CXorf40B-206ENST00000483447 EIF4G3O43432 1585 aaKnown RBP28.24■■■□□ 2.11
CXorf40B-206ENST00000483447 TARBP1Q13395 1621 aaKnown RBP28.23■■■□□ 2.11
CXorf40B-206ENST00000483447 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
CXorf40B-206ENST00000483447 POLA1P09884 1462 aaPredicted RBP28.19■■■□□ 2.1
CXorf40B-206ENST00000483447 RIMBP3CA6NJZ7 1639 aa28.14■■■□□ 2.1
CXorf40B-206ENST00000483447 RIMBP3BA6NNM3 1639 aa28.14■■■□□ 2.1
CXorf40B-206ENST00000483447 RIMBP3Q9UFD9 1639 aa28.14■■■□□ 2.1
CXorf40B-206ENST00000483447 CUX1P39880 1505 aa28.1■■■□□ 2.09
CXorf40B-206ENST00000483447 TRHP20396 242 aaPredicted RBP28.08■■■□□ 2.09
CXorf40B-206ENST00000483447 CYB5RLQ6IPT4 315 aa28.07■■■□□ 2.08
CXorf40B-206ENST00000483447 AEBP2Q6ZN18 517 aaPredicted RBP28.06■■■□□ 2.08
CXorf40B-206ENST00000483447 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
CXorf40B-206ENST00000483447 RAD54L2Q9Y4B4 1467 aa28.05■■■□□ 2.08
CXorf40B-206ENST00000483447 AQRO60306 1485 aaKnown RBP eCLIP28.04■■■□□ 2.088e-7■■■■■ 28.7
CXorf40B-206ENST00000483447 ARHGEF11O15085 1522 aa28.02■■■□□ 2.08
CXorf40B-206ENST00000483447 CHD1O14646 1710 aa28■■■□□ 2.07
CXorf40B-206ENST00000483447 SOGA1O94964 1423 aa27.99■■■□□ 2.07
CXorf40B-206ENST00000483447 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
CXorf40B-206ENST00000483447 TDRD9Q8NDG6 1382 aaKnown RBP27.89■■■□□ 2.06
CXorf40B-206ENST00000483447 SNAPC4Q5SXM2 1469 aa27.82■■■□□ 2.04
CXorf40B-206ENST00000483447 PBRM1Q86U86 1689 aa27.81■■■□□ 2.04
CXorf40B-206ENST00000483447 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
CXorf40B-206ENST00000483447 GRIN2BQ13224 1484 aa27.76■■■□□ 2.03
CXorf40B-206ENST00000483447 ABCA5Q8WWZ7 1642 aa27.75■■■□□ 2.03
CXorf40B-206ENST00000483447 ABCA10Q8WWZ4 1543 aa27.75■■■□□ 2.03
CXorf40B-206ENST00000483447 MAGI1Q96QZ7 1491 aaPredicted RBP27.75■■■□□ 2.03
CXorf40B-206ENST00000483447 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
CXorf40B-206ENST00000483447 SYNJ1O43426 1573 aa27.74■■■□□ 2.03
CXorf40B-206ENST00000483447 FBLN2P98095 1184 aa27.71■■■□□ 2.03
CXorf40B-206ENST00000483447 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.02
CXorf40B-206ENST00000483447 WRNQ14191 1432 aaPredicted RBP eCLIP27.69■■■□□ 2.02
CXorf40B-206ENST00000483447 ARAP1Q96P48 1450 aa27.67■■■□□ 2.02
CXorf40B-206ENST00000483447 SYNJ2O15056 1496 aa27.64■■■□□ 2.02
CXorf40B-206ENST00000483447 CLASP1Q7Z460 1538 aa27.64■■■□□ 2.02
CXorf40B-206ENST00000483447 CHMP7Q8WUX9 453 aaPredicted RBP27.56■■■□□ 2
CXorf40B-206ENST00000483447 ADAMTS12P58397 1594 aa27.52■■■□□ 2
CXorf40B-206ENST00000483447 GRIN2AQ12879 1464 aa27.43■■□□□ 1.98
CXorf40B-206ENST00000483447 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
CXorf40B-206ENST00000483447 CEP170Q5SW79 1584 aa27.36■■□□□ 1.97
CXorf40B-206ENST00000483447 FHAD1B1AJZ9 1412 aa27.34■■□□□ 1.97
CXorf40B-206ENST00000483447 NUP160Q12769 1436 aa27.31■■□□□ 1.96
CXorf40B-206ENST00000483447 SHROOM2Q13796 1616 aa27.23■■□□□ 1.95
CXorf40B-206ENST00000483447 ERCC6L2Q5T890 1561 aa27.22■■□□□ 1.95
CXorf40B-206ENST00000483447 RUSC2Q8N2Y8 1516 aa27.14■■□□□ 1.94
CXorf40B-206ENST00000483447 CUL7Q14999 1698 aa27.13■■□□□ 1.93
CXorf40B-206ENST00000483447 KIF27Q86VH2 1401 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms