RNA–Protein interactions for RNA: ENST00000483375.1

LRMDA-203, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2

Gene LRMDA, Length 294 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-203ENST00000483375 NISCHQ9Y2I1 1504 aa16.66■□□□□ 0.26
LRMDA-203ENST00000483375 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
LRMDA-203ENST00000483375 ABCC9O60706 1549 aa14.17□□□□□ -0.14
LRMDA-203ENST00000483375 ZCCHC6Q5VYS8 1495 aaKnown RBP13.94□□□□□ -0.18
LRMDA-203ENST00000483375 DCAF1Q9Y4B6 1507 aa13.83□□□□□ -0.2
LRMDA-203ENST00000483375 NACADO15069 1562 aa13.82□□□□□ -0.2
LRMDA-203ENST00000483375 MYO15BQ96JP2 1530 aa13.81□□□□□ -0.2
LRMDA-203ENST00000483375 RB1CC1Q8TDY2 1594 aa13.79□□□□□ -0.2
LRMDA-203ENST00000483375 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
LRMDA-203ENST00000483375 UNC13AQ9UPW8 1703 aa13.54□□□□□ -0.24
LRMDA-203ENST00000483375 SCRIBQ14160 1630 aa13.46□□□□□ -0.25
LRMDA-203ENST00000483375 BICRAQ9NZM4 1560 aa13.36□□□□□ -0.27
LRMDA-203ENST00000483375 SHROOM4Q9ULL8 1493 aa13.26□□□□□ -0.29
LRMDA-203ENST00000483375 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
LRMDA-203ENST00000483375 EIF4G1Q04637 1599 aaKnown RBP12.98□□□□□ -0.33
LRMDA-203ENST00000483375 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
LRMDA-203ENST00000483375 SMARCA4P51532 1647 aa12.92□□□□□ -0.34
LRMDA-203ENST00000483375 BAZ1AQ9NRL2 1556 aaPredicted RBP12.92□□□□□ -0.34
LRMDA-203ENST00000483375 CC2D2AQ9P2K1 1620 aa12.88□□□□□ -0.35
LRMDA-203ENST00000483375 MROH2BQ7Z745 1585 aa12.84□□□□□ -0.35
LRMDA-203ENST00000483375 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
LRMDA-203ENST00000483375 SMARCA2P51531 1590 aa12.77□□□□□ -0.36
LRMDA-203ENST00000483375 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
LRMDA-203ENST00000483375 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
LRMDA-203ENST00000483375 ATAD2BQ9ULI0 1458 aa12.75□□□□□ -0.37
LRMDA-203ENST00000483375 WIZO95785 1651 aa12.74□□□□□ -0.37
LRMDA-203ENST00000483375 HMGXB3Q12766 1538 aa12.71□□□□□ -0.38
LRMDA-203ENST00000483375 NCAPD3P42695 1498 aa12.71□□□□□ -0.38
LRMDA-203ENST00000483375 BAZ1BQ9UIG0 1483 aaKnown RBP12.66□□□□□ -0.38
LRMDA-203ENST00000483375 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
LRMDA-203ENST00000483375 SUPT5HO00267 1087 aaKnown RBP12.51□□□□□ -0.41
LRMDA-203ENST00000483375 CCDC88BA6NC98 1476 aa12.42□□□□□ -0.42
LRMDA-203ENST00000483375 PRDM2Q13029 1718 aa12.38□□□□□ -0.43
LRMDA-203ENST00000483375 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
LRMDA-203ENST00000483375 NESP48681 1621 aa12.33□□□□□ -0.43
LRMDA-203ENST00000483375 CFTRP13569 1480 aa12.33□□□□□ -0.44
LRMDA-203ENST00000483375 CADPSQ9ULU8 1353 aa12.32□□□□□ -0.44
LRMDA-203ENST00000483375 KIF21AQ7Z4S6 1674 aa12.27□□□□□ -0.45
LRMDA-203ENST00000483375 PDS5BQ9NTI5 1447 aa12.23□□□□□ -0.45
LRMDA-203ENST00000483375 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.46
LRMDA-203ENST00000483375 ERCC6Q03468 1493 aa12.2□□□□□ -0.46
LRMDA-203ENST00000483375 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
LRMDA-203ENST00000483375 THOC2Q8NI27 1593 aaKnown RBP12.17□□□□□ -0.46
LRMDA-203ENST00000483375 MRC2Q9UBG0 1479 aa12.13□□□□□ -0.47
LRMDA-203ENST00000483375 WDR62O43379 1518 aa12.11□□□□□ -0.47
LRMDA-203ENST00000483375 URB2Q14146 1524 aaKnown RBP12.08□□□□□ -0.48
LRMDA-203ENST00000483375 DNMBPQ6XZF7 1577 aa12.08□□□□□ -0.48
LRMDA-203ENST00000483375 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
LRMDA-203ENST00000483375 TOPBP1Q92547 1522 aa12.05□□□□□ -0.48
LRMDA-203ENST00000483375 BIVM-ERCC5R4GMW8 1640 aa12.04□□□□□ -0.48
LRMDA-203ENST00000483375 CUX1P39880 1505 aa12.04□□□□□ -0.48
LRMDA-203ENST00000483375 CUX2O14529 1486 aa12.02□□□□□ -0.48
LRMDA-203ENST00000483375 SYNJ1O43426 1573 aa12.02□□□□□ -0.49
LRMDA-203ENST00000483375 TOP2BQ02880 1626 aa12.02□□□□□ -0.49
LRMDA-203ENST00000483375 WRNQ14191 1432 aaPredicted RBP eCLIP12.02□□□□□ -0.49
LRMDA-203ENST00000483375 FGD5Q6ZNL6 1462 aa11.96□□□□□ -0.49
LRMDA-203ENST00000483375 POLA1P09884 1462 aaPredicted RBP11.95□□□□□ -0.5
LRMDA-203ENST00000483375 WDR97A6NE52 1622 aa11.93□□□□□ -0.5
LRMDA-203ENST00000483375 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
LRMDA-203ENST00000483375 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
LRMDA-203ENST00000483375 SOGA1O94964 1423 aa11.88□□□□□ -0.51
LRMDA-203ENST00000483375 RAD54L2Q9Y4B4 1467 aa11.88□□□□□ -0.51
LRMDA-203ENST00000483375 ABCA10Q8WWZ4 1543 aa11.86□□□□□ -0.51
LRMDA-203ENST00000483375 EIF4G3O43432 1585 aaKnown RBP11.85□□□□□ -0.51
LRMDA-203ENST00000483375 ABCA5Q8WWZ7 1642 aa11.85□□□□□ -0.51
LRMDA-203ENST00000483375 ZNF608Q9ULD9 1512 aaPredicted RBP11.83□□□□□ -0.52
LRMDA-203ENST00000483375 TRIM41Q8WV44 630 aa11.82□□□□□ -0.52
LRMDA-203ENST00000483375 PBRM1Q86U86 1689 aa11.81□□□□□ -0.52
LRMDA-203ENST00000483375 CHIC1Q5VXU3 224 aa11.81□□□□□ -0.52
LRMDA-203ENST00000483375 TDRD9Q8NDG6 1382 aaKnown RBP11.77□□□□□ -0.53
LRMDA-203ENST00000483375 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.53
LRMDA-203ENST00000483375 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
LRMDA-203ENST00000483375 KIF27Q86VH2 1401 aa11.75□□□□□ -0.53
LRMDA-203ENST00000483375 GRIN2BQ13224 1484 aa11.74□□□□□ -0.53
LRMDA-203ENST00000483375 ERICH3Q5RHP9 1530 aa11.74□□□□□ -0.53
LRMDA-203ENST00000483375 CUL7Q14999 1698 aa11.71□□□□□ -0.54
LRMDA-203ENST00000483375 ADAMTS12P58397 1594 aa11.71□□□□□ -0.54
LRMDA-203ENST00000483375 MAGI1Q96QZ7 1491 aaPredicted RBP11.7□□□□□ -0.54
LRMDA-203ENST00000483375 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
LRMDA-203ENST00000483375 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
LRMDA-203ENST00000483375 CHD1O14646 1710 aa11.69□□□□□ -0.54
LRMDA-203ENST00000483375 EEA1Q15075 1411 aa11.69□□□□□ -0.54
LRMDA-203ENST00000483375 IGF1RP08069 1367 aa11.65□□□□□ -0.55
LRMDA-203ENST00000483375 SYNJ2O15056 1496 aa11.64□□□□□ -0.55
LRMDA-203ENST00000483375 FHAD1B1AJZ9 1412 aa11.64□□□□□ -0.55
LRMDA-203ENST00000483375 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
LRMDA-203ENST00000483375 PRXQ9BXM0 1461 aa11.59□□□□□ -0.55
LRMDA-203ENST00000483375 KIF21BO75037 1637 aa11.59□□□□□ -0.55
LRMDA-203ENST00000483375 CARMIL1Q5VZK9 1371 aa11.58□□□□□ -0.56
LRMDA-203ENST00000483375 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
LRMDA-203ENST00000483375 RAPGEF2Q9Y4G8 1499 aa11.57□□□□□ -0.56
LRMDA-203ENST00000483375 CEP170Q5SW79 1584 aa11.55□□□□□ -0.56
LRMDA-203ENST00000483375 FAM9AQ8IZU1 332 aaPredicted RBP11.55□□□□□ -0.56
LRMDA-203ENST00000483375 CHMP7Q8WUX9 453 aaPredicted RBP11.55□□□□□ -0.56
LRMDA-203ENST00000483375 CTTNBP2Q8WZ74 1663 aa11.55□□□□□ -0.56
LRMDA-203ENST00000483375 FBLN2P98095 1184 aa11.54□□□□□ -0.56
LRMDA-203ENST00000483375 NUP160Q12769 1436 aa11.53□□□□□ -0.56
LRMDA-203ENST00000483375 CLASP1Q7Z460 1538 aa11.53□□□□□ -0.56
LRMDA-203ENST00000483375 OSCARQ8IYS5 282 aa11.49□□□□□ -0.57
LRMDA-203ENST00000483375 GOLGA3Q08378 1498 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms