RNA–Protein interactions for RNA: ENST00000483310.5

HM13-217, Transcript of histocompatibility minor 13, humanhuman

TSL 3

Gene HM13, Length 755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-217ENST00000483310 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.42
HM13-217ENST00000483310 CCDC180Q9P1Z9 1646 aa27.15■■□□□ 1.94
HM13-217ENST00000483310 ABCC9O60706 1549 aa26.95■■□□□ 1.91
HM13-217ENST00000483310 RB1CC1Q8TDY2 1594 aa25.77■■□□□ 1.72
HM13-217ENST00000483310 NACADO15069 1562 aa25.59■■□□□ 1.69
HM13-217ENST00000483310 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
HM13-217ENST00000483310 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
HM13-217ENST00000483310 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
HM13-217ENST00000483310 ZCCHC6Q5VYS8 1495 aaKnown RBP25.07■■□□□ 1.6
HM13-217ENST00000483310 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
HM13-217ENST00000483310 DNAJC5BQ9UF47 199 aa25.05■■□□□ 1.6
HM13-217ENST00000483310 DCAF1Q9Y4B6 1507 aa24.96■■□□□ 1.59
HM13-217ENST00000483310 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
HM13-217ENST00000483310 SCRIBQ14160 1630 aa24.71■■□□□ 1.55
HM13-217ENST00000483310 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.54
HM13-217ENST00000483310 CC2D2AQ9P2K1 1620 aa24.38■■□□□ 1.49
HM13-217ENST00000483310 EIF4G1Q04637 1599 aaKnown RBP24.35■■□□□ 1.49
HM13-217ENST00000483310 CECR2Q9BXF3 1484 aa24.28■■□□□ 1.48
HM13-217ENST00000483310 SMARCA4P51532 1647 aa23.58■■□□□ 1.36
HM13-217ENST00000483310 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
HM13-217ENST00000483310 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
HM13-217ENST00000483310 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
HM13-217ENST00000483310 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
HM13-217ENST00000483310 HMGXB3Q12766 1538 aa23.47■■□□□ 1.35
HM13-217ENST00000483310 BAZ1BQ9UIG0 1483 aaKnown RBP23.35■■□□□ 1.33
HM13-217ENST00000483310 PEG3Q9GZU2 1588 aa23.33■■□□□ 1.33
HM13-217ENST00000483310 ERCC6Q03468 1493 aa23.33■■□□□ 1.33
HM13-217ENST00000483310 MROH2BQ7Z745 1585 aa23.25■■□□□ 1.31
HM13-217ENST00000483310 CUX2O14529 1486 aa23.22■■□□□ 1.31
HM13-217ENST00000483310 NESP48681 1621 aa23.15■■□□□ 1.3
HM13-217ENST00000483310 LAMC3Q9Y6N6 1575 aa23.09■■□□□ 1.29
HM13-217ENST00000483310 WIZO95785 1651 aa23.01■■□□□ 1.27
HM13-217ENST00000483310 DNAJC5Q9H3Z4 198 aa22.98■■□□□ 1.27
HM13-217ENST00000483310 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
HM13-217ENST00000483310 KIF21AQ7Z4S6 1674 aa22.95■■□□□ 1.26
HM13-217ENST00000483310 PDS5BQ9NTI5 1447 aa22.93■■□□□ 1.26
HM13-217ENST00000483310 CADPSQ9ULU8 1353 aa22.86■■□□□ 1.25
HM13-217ENST00000483310 RSF1Q96T23 1441 aaPredicted RBP22.79■■□□□ 1.24
HM13-217ENST00000483310 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
HM13-217ENST00000483310 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
HM13-217ENST00000483310 CEP164Q9UPV0 1460 aa22.68■■□□□ 1.22
HM13-217ENST00000483310 WDR62O43379 1518 aa22.67■■□□□ 1.22
HM13-217ENST00000483310 CFTRP13569 1480 aa22.63■■□□□ 1.21
HM13-217ENST00000483310 FANCD2Q9BXW9 1451 aa22.63■■□□□ 1.21
HM13-217ENST00000483310 PRDM2Q13029 1718 aa22.54■■□□□ 1.2
HM13-217ENST00000483310 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
HM13-217ENST00000483310 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
HM13-217ENST00000483310 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
HM13-217ENST00000483310 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
HM13-217ENST00000483310 IFT140Q96RY7 1462 aa22.2■■□□□ 1.14
HM13-217ENST00000483310 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
HM13-217ENST00000483310 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
HM13-217ENST00000483310 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
HM13-217ENST00000483310 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
HM13-217ENST00000483310 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.12
HM13-217ENST00000483310 TARBP1Q13395 1621 aaKnown RBP22.01■■□□□ 1.11
HM13-217ENST00000483310 POLA1P09884 1462 aaPredicted RBP21.99■■□□□ 1.11
HM13-217ENST00000483310 AQRO60306 1485 aaKnown RBP eCLIP21.92■■□□□ 1.18e-8■■■■■ 27.3
HM13-217ENST00000483310 CHD1O14646 1710 aa21.9■■□□□ 1.1
HM13-217ENST00000483310 SUPT5HO00267 1087 aaKnown RBP21.88■■□□□ 1.09
HM13-217ENST00000483310 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
HM13-217ENST00000483310 RAD54L2Q9Y4B4 1467 aa21.88■■□□□ 1.09
HM13-217ENST00000483310 SOGA1O94964 1423 aa21.88■■□□□ 1.09
HM13-217ENST00000483310 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
HM13-217ENST00000483310 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
HM13-217ENST00000483310 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
HM13-217ENST00000483310 WDR97A6NE52 1622 aa21.86■■□□□ 1.09
HM13-217ENST00000483310 CUX1P39880 1505 aa21.85■■□□□ 1.09
HM13-217ENST00000483310 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
HM13-217ENST00000483310 TDRD9Q8NDG6 1382 aaKnown RBP21.8■■□□□ 1.08
HM13-217ENST00000483310 FBLN2P98095 1184 aa21.79■■□□□ 1.08
HM13-217ENST00000483310 SNAPC4Q5SXM2 1469 aa21.74■■□□□ 1.07
HM13-217ENST00000483310 MAGI1Q96QZ7 1491 aaPredicted RBP21.71■■□□□ 1.07
HM13-217ENST00000483310 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
HM13-217ENST00000483310 PBRM1Q86U86 1689 aa21.69■■□□□ 1.06
HM13-217ENST00000483310 SYNJ1O43426 1573 aa21.65■■□□□ 1.06
HM13-217ENST00000483310 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
HM13-217ENST00000483310 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.05
HM13-217ENST00000483310 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
HM13-217ENST00000483310 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
HM13-217ENST00000483310 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
HM13-217ENST00000483310 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
HM13-217ENST00000483310 BIVM-ERCC5R4GMW8 1640 aa21.59■■□□□ 1.05
HM13-217ENST00000483310 CYB5RLQ6IPT4 315 aa21.59■■□□□ 1.05
HM13-217ENST00000483310 TOP2BQ02880 1626 aa21.58■■□□□ 1.04
HM13-217ENST00000483310 ARAP1Q96P48 1450 aa21.58■■□□□ 1.04
HM13-217ENST00000483310 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.04
HM13-217ENST00000483310 ADAMTS12P58397 1594 aa21.45■■□□□ 1.02
HM13-217ENST00000483310 GRIN2AQ12879 1464 aa21.43■■□□□ 1.02
HM13-217ENST00000483310 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.01
HM13-217ENST00000483310 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
HM13-217ENST00000483310 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
HM13-217ENST00000483310 CEP170Q5SW79 1584 aa21.34■■□□□ 1.01
HM13-217ENST00000483310 NUP160Q12769 1436 aa21.32■■□□□ 1
HM13-217ENST00000483310 SHROOM2Q13796 1616 aa21.26■□□□□ 0.99
HM13-217ENST00000483310 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
HM13-217ENST00000483310 RUSC2Q8N2Y8 1516 aa21.15■□□□□ 0.98
HM13-217ENST00000483310 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
HM13-217ENST00000483310 CUL7Q14999 1698 aa21.15■□□□□ 0.98
HM13-217ENST00000483310 PRG4Q92954 1404 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms