RNA–Protein interactions for RNA: ENST00000483250.5

STRC-210, Transcript of stereocilin, humanhuman

TSL 4

Gene STRC, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-210ENST00000483250 NISCHQ9Y2I1 1504 aa33.2■■■□□ 2.91
STRC-210ENST00000483250 CCDC180Q9P1Z9 1646 aa29.45■■■□□ 2.3
STRC-210ENST00000483250 ABCC9O60706 1549 aa28.89■■■□□ 2.21
STRC-210ENST00000483250 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
STRC-210ENST00000483250 RB1CC1Q8TDY2 1594 aa27.76■■■□□ 2.03
STRC-210ENST00000483250 NACADO15069 1562 aa27.73■■■□□ 2.03
STRC-210ENST00000483250 ZCCHC6Q5VYS8 1495 aaKnown RBP27.65■■■□□ 2.02
STRC-210ENST00000483250 MYO15BQ96JP2 1530 aa27.53■■■□□ 2
STRC-210ENST00000483250 DCAF1Q9Y4B6 1507 aa27.44■■□□□ 1.98
STRC-210ENST00000483250 PABPN1Q86U42 306 aaKnown RBP eCLIP27.05■■□□□ 1.92
STRC-210ENST00000483250 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
STRC-210ENST00000483250 SCRIBQ14160 1630 aa26.95■■□□□ 1.91
STRC-210ENST00000483250 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
STRC-210ENST00000483250 SHROOM4Q9ULL8 1493 aa26.61■■□□□ 1.85
STRC-210ENST00000483250 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
STRC-210ENST00000483250 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
STRC-210ENST00000483250 CC2D2AQ9P2K1 1620 aa26.08■■□□□ 1.77
STRC-210ENST00000483250 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
STRC-210ENST00000483250 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
STRC-210ENST00000483250 BAZ1AQ9NRL2 1556 aaPredicted RBP25.73■■□□□ 1.71
STRC-210ENST00000483250 ATAD2BQ9ULI0 1458 aa25.62■■□□□ 1.69
STRC-210ENST00000483250 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
STRC-210ENST00000483250 NCAPD3P42695 1498 aa25.59■■□□□ 1.69
STRC-210ENST00000483250 SMARCA2P51531 1590 aa25.58■■□□□ 1.69
STRC-210ENST00000483250 PEG3Q9GZU2 1588 aa25.46■■□□□ 1.67
STRC-210ENST00000483250 HMGXB3Q12766 1538 aa25.44■■□□□ 1.66
STRC-210ENST00000483250 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
STRC-210ENST00000483250 RSF1Q96T23 1441 aaPredicted RBP25.33■■□□□ 1.65
STRC-210ENST00000483250 WIZO95785 1651 aa25.31■■□□□ 1.64
STRC-210ENST00000483250 TOP2AP11388 1531 aaKnown RBP25.05■■□□□ 1.6
STRC-210ENST00000483250 NESP48681 1621 aa24.98■■□□□ 1.59
STRC-210ENST00000483250 ERCC6Q03468 1493 aa24.93■■□□□ 1.58
STRC-210ENST00000483250 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
STRC-210ENST00000483250 CADPSQ9ULU8 1353 aa24.88■■□□□ 1.57
STRC-210ENST00000483250 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
STRC-210ENST00000483250 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
STRC-210ENST00000483250 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
STRC-210ENST00000483250 CFTRP13569 1480 aa24.7■■□□□ 1.55
STRC-210ENST00000483250 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.53
STRC-210ENST00000483250 CUX2O14529 1486 aa24.59■■□□□ 1.53
STRC-210ENST00000483250 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
STRC-210ENST00000483250 CEP164Q9UPV0 1460 aa24.56■■□□□ 1.52
STRC-210ENST00000483250 THOC2Q8NI27 1593 aaKnown RBP24.55■■□□□ 1.52
STRC-210ENST00000483250 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
STRC-210ENST00000483250 PRDM2Q13029 1718 aa24.44■■□□□ 1.5
STRC-210ENST00000483250 WDR62O43379 1518 aa24.4■■□□□ 1.5
STRC-210ENST00000483250 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
STRC-210ENST00000483250 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
STRC-210ENST00000483250 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
STRC-210ENST00000483250 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
STRC-210ENST00000483250 IFT140Q96RY7 1462 aa24.04■■□□□ 1.44
STRC-210ENST00000483250 CUX1P39880 1505 aa24.01■■□□□ 1.43
STRC-210ENST00000483250 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
STRC-210ENST00000483250 FGD5Q6ZNL6 1462 aa23.94■■□□□ 1.42
STRC-210ENST00000483250 ZNF608Q9ULD9 1512 aaPredicted RBP23.93■■□□□ 1.42
STRC-210ENST00000483250 SOGA1O94964 1423 aa23.92■■□□□ 1.42
STRC-210ENST00000483250 RAD54L2Q9Y4B4 1467 aa23.9■■□□□ 1.42
STRC-210ENST00000483250 WRNQ14191 1432 aaPredicted RBP eCLIP23.9■■□□□ 1.42
STRC-210ENST00000483250 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
STRC-210ENST00000483250 DNAJC5Q9H3Z4 198 aa23.83■■□□□ 1.41
STRC-210ENST00000483250 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.4
STRC-210ENST00000483250 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
STRC-210ENST00000483250 SYNJ1O43426 1573 aa23.8■■□□□ 1.4
STRC-210ENST00000483250 TOP2BQ02880 1626 aa23.8■■□□□ 1.4
STRC-210ENST00000483250 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
STRC-210ENST00000483250 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
STRC-210ENST00000483250 WDR97A6NE52 1622 aa23.7■■□□□ 1.38
STRC-210ENST00000483250 ABCA10Q8WWZ4 1543 aa23.69■■□□□ 1.38
STRC-210ENST00000483250 OSCARQ8IYS5 282 aa23.64■■□□□ 1.37
STRC-210ENST00000483250 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
STRC-210ENST00000483250 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
STRC-210ENST00000483250 FBLN2P98095 1184 aa23.6■■□□□ 1.37
STRC-210ENST00000483250 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
STRC-210ENST00000483250 ABCA5Q8WWZ7 1642 aa23.56■■□□□ 1.36
STRC-210ENST00000483250 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
STRC-210ENST00000483250 PBRM1Q86U86 1689 aa23.52■■□□□ 1.36
STRC-210ENST00000483250 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.36
STRC-210ENST00000483250 CHD1O14646 1710 aa23.47■■□□□ 1.35
STRC-210ENST00000483250 SYNJ2O15056 1496 aa23.45■■□□□ 1.34
STRC-210ENST00000483250 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
STRC-210ENST00000483250 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
STRC-210ENST00000483250 ERICH3Q5RHP9 1530 aa23.41■■□□□ 1.34
STRC-210ENST00000483250 FHAD1B1AJZ9 1412 aa23.36■■□□□ 1.33
STRC-210ENST00000483250 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
STRC-210ENST00000483250 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
STRC-210ENST00000483250 IGF1RP08069 1367 aa23.29■■□□□ 1.32
STRC-210ENST00000483250 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
STRC-210ENST00000483250 ARHGEF11O15085 1522 aa23.2■■□□□ 1.3
STRC-210ENST00000483250 CUL7Q14999 1698 aa23.19■■□□□ 1.3
STRC-210ENST00000483250 RIMBP3CA6NJZ7 1639 aa23.19■■□□□ 1.3
STRC-210ENST00000483250 RIMBP3BA6NNM3 1639 aa23.19■■□□□ 1.3
STRC-210ENST00000483250 RIMBP3Q9UFD9 1639 aa23.19■■□□□ 1.3
STRC-210ENST00000483250 NUP160Q12769 1436 aa23.19■■□□□ 1.3
STRC-210ENST00000483250 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
STRC-210ENST00000483250 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
STRC-210ENST00000483250 CEP170Q5SW79 1584 aa23.17■■□□□ 1.3
STRC-210ENST00000483250 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
STRC-210ENST00000483250 CYB5RLQ6IPT4 315 aa23.06■■□□□ 1.28
STRC-210ENST00000483250 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
STRC-210ENST00000483250 ARAP1Q96P48 1450 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms