RNA–Protein interactions for RNA: ENST00000483200.2

PRICKLE4-206, Transcript of prickle planar cell polarity protein 4, humanhuman

TSL 2

Gene PRICKLE4, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4-206ENST00000483200 NISCHQ9Y2I1 1504 aa58.24■■■■■ 6.91
PRICKLE4-206ENST00000483200 CCDC180Q9P1Z9 1646 aa52■■■■■ 5.91
PRICKLE4-206ENST00000483200 ABCC9O60706 1549 aa51.29■■■■■ 5.8
PRICKLE4-206ENST00000483200 RB1CC1Q8TDY2 1594 aa49.18■■■■■ 5.46
PRICKLE4-206ENST00000483200 DCAF8L2P0C7V8 631 aa49.03■■■■■ 5.44
PRICKLE4-206ENST00000483200 NACADO15069 1562 aa48.98■■■■■ 5.43
PRICKLE4-206ENST00000483200 MYO15BQ96JP2 1530 aa48.48■■■■■ 5.35
PRICKLE4-206ENST00000483200 ZCCHC6Q5VYS8 1495 aaKnown RBP48.42■■■■■ 5.34
PRICKLE4-206ENST00000483200 DCAF1Q9Y4B6 1507 aa48.14■■■■■ 5.3
PRICKLE4-206ENST00000483200 UNC13AQ9UPW8 1703 aa47.99■■■■■ 5.27
PRICKLE4-206ENST00000483200 PABPN1Q86U42 306 aaKnown RBP eCLIP47.87■■■■■ 5.251e-7■■■■■ 27.8
PRICKLE4-206ENST00000483200 BICRAQ9NZM4 1560 aa47.58■■■■■ 5.21
PRICKLE4-206ENST00000483200 SCRIBQ14160 1630 aa47.45■■■■■ 5.19
PRICKLE4-206ENST00000483200 DNAJC5BQ9UF47 199 aa47.33■■■■■ 5.17
PRICKLE4-206ENST00000483200 SHROOM4Q9ULL8 1493 aa47.1■■■■■ 5.13
PRICKLE4-206ENST00000483200 EIF4G1Q04637 1599 aaKnown RBP46.43■■■■■ 5.02
PRICKLE4-206ENST00000483200 CC2D2AQ9P2K1 1620 aa46.36■■■■■ 5.01
PRICKLE4-206ENST00000483200 CECR2Q9BXF3 1484 aa46.13■■■■■ 4.98
PRICKLE4-206ENST00000483200 SMARCA4P51532 1647 aa45.3■■■■■ 4.84
PRICKLE4-206ENST00000483200 BAZ1AQ9NRL2 1556 aaPredicted RBP45.22■■■■■ 4.83
PRICKLE4-206ENST00000483200 NCAPD3P42695 1498 aa45.16■■■■■ 4.82
PRICKLE4-206ENST00000483200 ATAD2BQ9ULI0 1458 aa45.13■■■■■ 4.82
PRICKLE4-206ENST00000483200 SMARCA2P51531 1590 aa45.11■■■■■ 4.81
PRICKLE4-206ENST00000483200 HMGXB3Q12766 1538 aa44.92■■■■■ 4.78
PRICKLE4-206ENST00000483200 MROH2BQ7Z745 1585 aa44.87■■■■■ 4.77
PRICKLE4-206ENST00000483200 BAZ1BQ9UIG0 1483 aaKnown RBP44.82■■■■■ 4.77
PRICKLE4-206ENST00000483200 PEG3Q9GZU2 1588 aa44.81■■■■■ 4.76
PRICKLE4-206ENST00000483200 WIZO95785 1651 aa44.41■■■■■ 4.7
PRICKLE4-206ENST00000483200 ERCC6Q03468 1493 aa44.33■■■■■ 4.69
PRICKLE4-206ENST00000483200 NESP48681 1621 aa44.22■■■■■ 4.67
PRICKLE4-206ENST00000483200 RSF1Q96T23 1441 aaPredicted RBP44.21■■■■■ 4.67
PRICKLE4-206ENST00000483200 LAMC3Q9Y6N6 1575 aa44.09■■■■■ 4.65
PRICKLE4-206ENST00000483200 CUX2O14529 1486 aa43.91■■■■■ 4.62
PRICKLE4-206ENST00000483200 TOP2AP11388 1531 aaKnown RBP43.91■■■■■ 4.62
PRICKLE4-206ENST00000483200 CADPSQ9ULU8 1353 aa43.86■■■■■ 4.61
PRICKLE4-206ENST00000483200 PDS5BQ9NTI5 1447 aa43.84■■■■■ 4.61
PRICKLE4-206ENST00000483200 KIF21AQ7Z4S6 1674 aa43.72■■■■■ 4.59
PRICKLE4-206ENST00000483200 THOC2Q8NI27 1593 aaKnown RBP43.63■■■■■ 4.57
PRICKLE4-206ENST00000483200 CFTRP13569 1480 aa43.48■■■■■ 4.55
PRICKLE4-206ENST00000483200 MRC2Q9UBG0 1479 aa43.39■■■■■ 4.54
PRICKLE4-206ENST00000483200 CEP164Q9UPV0 1460 aa43.39■■■■■ 4.54
PRICKLE4-206ENST00000483200 CCDC88BA6NC98 1476 aa43.38■■■■■ 4.53
PRICKLE4-206ENST00000483200 FANCD2Q9BXW9 1451 aa43.38■■■■■ 4.53
PRICKLE4-206ENST00000483200 WDR62O43379 1518 aa43.22■■■■■ 4.51
PRICKLE4-206ENST00000483200 PRDM2Q13029 1718 aa43.19■■■■■ 4.5
PRICKLE4-206ENST00000483200 DNAJC5Q9H3Z4 198 aa43.01■■■■■ 4.48
PRICKLE4-206ENST00000483200 SUPT5HO00267 1087 aaKnown RBP42.94■■■■■ 4.46
PRICKLE4-206ENST00000483200 URB2Q14146 1524 aaKnown RBP42.92■■■■■ 4.46
PRICKLE4-206ENST00000483200 ABCC8Q09428 1581 aa42.64■■■■■ 4.42
PRICKLE4-206ENST00000483200 TOPBP1Q92547 1522 aa42.62■■■■■ 4.41
PRICKLE4-206ENST00000483200 DNMBPQ6XZF7 1577 aa42.56■■■■■ 4.4
PRICKLE4-206ENST00000483200 IFT140Q96RY7 1462 aa42.48■■■■■ 4.39
PRICKLE4-206ENST00000483200 ZNF608Q9ULD9 1512 aaPredicted RBP42.27■■■■■ 4.36
PRICKLE4-206ENST00000483200 POLA1P09884 1462 aaPredicted RBP42.23■■■■■ 4.35
PRICKLE4-206ENST00000483200 TARBP1Q13395 1621 aaKnown RBP42.16■■■■■ 4.34
PRICKLE4-206ENST00000483200 EIF4G3O43432 1585 aaKnown RBP42.14■■■■■ 4.34
PRICKLE4-206ENST00000483200 CUX1P39880 1505 aa42.12■■■■■ 4.33
PRICKLE4-206ENST00000483200 SOGA1O94964 1423 aa42.09■■■■■ 4.33
PRICKLE4-206ENST00000483200 FGD5Q6ZNL6 1462 aa42.09■■■■■ 4.33
PRICKLE4-206ENST00000483200 OSCARQ8IYS5 282 aa42.07■■■■■ 4.33
PRICKLE4-206ENST00000483200 RAD54L2Q9Y4B4 1467 aa42.05■■■■■ 4.32
PRICKLE4-206ENST00000483200 AQRO60306 1485 aaKnown RBP eCLIP42.02■■■■■ 4.32
PRICKLE4-206ENST00000483200 TDRD9Q8NDG6 1382 aaKnown RBP41.89■■■■■ 4.3
PRICKLE4-206ENST00000483200 WDR97A6NE52 1622 aa41.84■■■■■ 4.29
PRICKLE4-206ENST00000483200 WRNQ14191 1432 aaPredicted RBP eCLIP41.77■■■■■ 4.28
PRICKLE4-206ENST00000483200 FBLN2P98095 1184 aa41.73■■■■■ 4.27
PRICKLE4-206ENST00000483200 CHD1O14646 1710 aa41.7■■■■■ 4.27
PRICKLE4-206ENST00000483200 TOP2BQ02880 1626 aa41.69■■■■■ 4.26
PRICKLE4-206ENST00000483200 BIVM-ERCC5R4GMW8 1640 aa41.68■■■■■ 4.26
PRICKLE4-206ENST00000483200 SYNJ1O43426 1573 aa41.64■■■■■ 4.26
PRICKLE4-206ENST00000483200 GRIN2BQ13224 1484 aa41.64■■■■■ 4.26
PRICKLE4-206ENST00000483200 SNAPC4Q5SXM2 1469 aa41.64■■■■■ 4.26
PRICKLE4-206ENST00000483200 ABCA10Q8WWZ4 1543 aa41.63■■■■■ 4.25
PRICKLE4-206ENST00000483200 GAPVD1Q14C86 1478 aa41.6■■■■■ 4.25
PRICKLE4-206ENST00000483200 MAGI1Q96QZ7 1491 aaPredicted RBP41.57■■■■■ 4.25
PRICKLE4-206ENST00000483200 TRIM41Q8WV44 630 aa41.56■■■■■ 4.24
PRICKLE4-206ENST00000483200 PBRM1Q86U86 1689 aa41.55■■■■■ 4.24
PRICKLE4-206ENST00000483200 CHMP7Q8WUX9 453 aaPredicted RBP41.51■■■■■ 4.24
PRICKLE4-206ENST00000483200 ABCA5Q8WWZ7 1642 aa41.5■■■■■ 4.23
PRICKLE4-206ENST00000483200 SYNJ2O15056 1496 aa41.41■■■■■ 4.22
PRICKLE4-206ENST00000483200 RIMBP3CA6NJZ7 1639 aa41.39■■■■■ 4.22
PRICKLE4-206ENST00000483200 RIMBP3BA6NNM3 1639 aa41.39■■■■■ 4.22
PRICKLE4-206ENST00000483200 RIMBP3Q9UFD9 1639 aa41.39■■■■■ 4.22
PRICKLE4-206ENST00000483200 ARHGEF11O15085 1522 aa41.34■■■■■ 4.21
PRICKLE4-206ENST00000483200 CLASP1Q7Z460 1538 aa41.17■■■■■ 4.18
PRICKLE4-206ENST00000483200 ADAMTS12P58397 1594 aa41.16■■■■■ 4.18
PRICKLE4-206ENST00000483200 ERICH3Q5RHP9 1530 aa41.15■■■■■ 4.18
PRICKLE4-206ENST00000483200 GRIN2AQ12879 1464 aa41.09■■■■■ 4.17
PRICKLE4-206ENST00000483200 FHAD1B1AJZ9 1412 aa41.09■■■■■ 4.17
PRICKLE4-206ENST00000483200 CYB5RLQ6IPT4 315 aa41.04■■■■■ 4.16
PRICKLE4-206ENST00000483200 KIF27Q86VH2 1401 aa40.95■■■■■ 4.15
PRICKLE4-206ENST00000483200 ARAP1Q96P48 1450 aa40.95■■■■■ 4.15
PRICKLE4-206ENST00000483200 CEP170Q5SW79 1584 aa40.88■■■■■ 4.13
PRICKLE4-206ENST00000483200 NUP160Q12769 1436 aa40.88■■■■■ 4.13
PRICKLE4-206ENST00000483200 IGF1RP08069 1367 aa40.74■■■■■ 4.11
PRICKLE4-206ENST00000483200 CUL7Q14999 1698 aa40.74■■■■■ 4.11
PRICKLE4-206ENST00000483200 SHROOM2Q13796 1616 aa40.62■■■■■ 4.09
PRICKLE4-206ENST00000483200 ERCC6L2Q5T890 1561 aa40.57■■■■■ 4.08
PRICKLE4-206ENST00000483200 CARMIL1Q5VZK9 1371 aa40.56■■■■■ 4.08
PRICKLE4-206ENST00000483200 RUSC2Q8N2Y8 1516 aa40.56■■■■■ 4.08
Retrieved 100 of 20,778 RNA–protein pairs in 312 ms