RNA–Protein interactions for RNA: ENST00000483178.2

SIM2-205, Transcript of SIM bHLH transcription factor 2, humanhuman

TSL 3

Gene SIM2, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-205ENST00000483178 NISCHQ9Y2I1 1504 aa27.96■■■□□ 2.07
SIM2-205ENST00000483178 ABCC9O60706 1549 aa26.43■■□□□ 1.82
SIM2-205ENST00000483178 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
SIM2-205ENST00000483178 CCDC180Q9P1Z9 1646 aa25.35■■□□□ 1.65
SIM2-205ENST00000483178 RB1CC1Q8TDY2 1594 aa24.68■■□□□ 1.54
SIM2-205ENST00000483178 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.52
SIM2-205ENST00000483178 NACADO15069 1562 aa24.3■■□□□ 1.48
SIM2-205ENST00000483178 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
SIM2-205ENST00000483178 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
SIM2-205ENST00000483178 BICRAQ9NZM4 1560 aa23.95■■□□□ 1.43
SIM2-205ENST00000483178 CECR2Q9BXF3 1484 aa23.93■■□□□ 1.42
SIM2-205ENST00000483178 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
SIM2-205ENST00000483178 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
SIM2-205ENST00000483178 MYO15BQ96JP2 1530 aa23.66■■□□□ 1.38
SIM2-205ENST00000483178 SHROOM4Q9ULL8 1493 aa23.61■■□□□ 1.37
SIM2-205ENST00000483178 EIF4G1Q04637 1599 aaKnown RBP23.48■■□□□ 1.35
SIM2-205ENST00000483178 CUX2O14529 1486 aa23.15■■□□□ 1.3
SIM2-205ENST00000483178 SCRIBQ14160 1630 aa23.12■■□□□ 1.29
SIM2-205ENST00000483178 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
SIM2-205ENST00000483178 ZCCHC6Q5VYS8 1495 aaKnown RBP22.95■■□□□ 1.26
SIM2-205ENST00000483178 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
SIM2-205ENST00000483178 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
SIM2-205ENST00000483178 NCAPD3P42695 1498 aa22.51■■□□□ 1.19
SIM2-205ENST00000483178 NESP48681 1621 aa22.41■■□□□ 1.18
SIM2-205ENST00000483178 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
SIM2-205ENST00000483178 THOC2Q8NI27 1593 aaKnown RBP22.27■■□□□ 1.16
SIM2-205ENST00000483178 HMGXB3Q12766 1538 aa22.18■■□□□ 1.14
SIM2-205ENST00000483178 SMARCA2P51531 1590 aa22.15■■□□□ 1.14
SIM2-205ENST00000483178 PDS5BQ9NTI5 1447 aa22.09■■□□□ 1.13
SIM2-205ENST00000483178 LAMC3Q9Y6N6 1575 aa22.07■■□□□ 1.12
SIM2-205ENST00000483178 OSCARQ8IYS5 282 aa22.05■■□□□ 1.12
SIM2-205ENST00000483178 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
SIM2-205ENST00000483178 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
SIM2-205ENST00000483178 KIF21AQ7Z4S6 1674 aa21.94■■□□□ 1.1
SIM2-205ENST00000483178 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
SIM2-205ENST00000483178 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
SIM2-205ENST00000483178 WDR62O43379 1518 aa21.82■■□□□ 1.08
SIM2-205ENST00000483178 CADPSQ9ULU8 1353 aa21.81■■□□□ 1.08
SIM2-205ENST00000483178 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
SIM2-205ENST00000483178 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
SIM2-205ENST00000483178 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
SIM2-205ENST00000483178 RIMBP3CA6NJZ7 1639 aa21.67■■□□□ 1.06
SIM2-205ENST00000483178 RIMBP3BA6NNM3 1639 aa21.67■■□□□ 1.06
SIM2-205ENST00000483178 RIMBP3Q9UFD9 1639 aa21.67■■□□□ 1.06
SIM2-205ENST00000483178 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
SIM2-205ENST00000483178 CYB5RLQ6IPT4 315 aa21.61■■□□□ 1.05
SIM2-205ENST00000483178 ARHGEF11O15085 1522 aa21.58■■□□□ 1.04
SIM2-205ENST00000483178 FANCD2Q9BXW9 1451 aa21.53■■□□□ 1.04
SIM2-205ENST00000483178 MROH2BQ7Z745 1585 aa21.52■■□□□ 1.04
SIM2-205ENST00000483178 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
SIM2-205ENST00000483178 CFTRP13569 1480 aa21.32■■□□□ 1
SIM2-205ENST00000483178 ARAP1Q96P48 1450 aa21.31■■□□□ 1
SIM2-205ENST00000483178 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
SIM2-205ENST00000483178 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
SIM2-205ENST00000483178 RSF1Q96T23 1441 aaPredicted RBP21.18■□□□□ 0.98
SIM2-205ENST00000483178 FBLN2P98095 1184 aa21.15■□□□□ 0.98
SIM2-205ENST00000483178 WIZO95785 1651 aa21.14■□□□□ 0.97
SIM2-205ENST00000483178 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
SIM2-205ENST00000483178 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.95
SIM2-205ENST00000483178 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
SIM2-205ENST00000483178 CHD1O14646 1710 aa20.97■□□□□ 0.95
SIM2-205ENST00000483178 ILDR1Q86SU0 546 aaPredicted RBP20.92■□□□□ 0.94
SIM2-205ENST00000483178 ABCC8Q09428 1581 aa20.91■□□□□ 0.94
SIM2-205ENST00000483178 TOP2AP11388 1531 aaKnown RBP20.86■□□□□ 0.93
SIM2-205ENST00000483178 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
SIM2-205ENST00000483178 CLASP1Q7Z460 1538 aa20.81■□□□□ 0.92
SIM2-205ENST00000483178 TARBP1Q13395 1621 aaKnown RBP20.79■□□□□ 0.92
SIM2-205ENST00000483178 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
SIM2-205ENST00000483178 TDRD9Q8NDG6 1382 aaKnown RBP20.77■□□□□ 0.92
SIM2-205ENST00000483178 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
SIM2-205ENST00000483178 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
SIM2-205ENST00000483178 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
SIM2-205ENST00000483178 SNAPC4Q5SXM2 1469 aa20.74■□□□□ 0.91
SIM2-205ENST00000483178 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
SIM2-205ENST00000483178 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
SIM2-205ENST00000483178 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
SIM2-205ENST00000483178 SOGA1O94964 1423 aa20.67■□□□□ 0.9
SIM2-205ENST00000483178 MAGI1Q96QZ7 1491 aaPredicted RBP20.64■□□□□ 0.89
SIM2-205ENST00000483178 SYNJ2O15056 1496 aa20.61■□□□□ 0.89
SIM2-205ENST00000483178 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
SIM2-205ENST00000483178 KDM4FA0A1W2PPD8 638 aa20.56■□□□□ 0.88
SIM2-205ENST00000483178 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
SIM2-205ENST00000483178 FGD5Q6ZNL6 1462 aa20.45■□□□□ 0.86
SIM2-205ENST00000483178 FAM69CQ0P6D2 419 aa20.42■□□□□ 0.86
SIM2-205ENST00000483178 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
SIM2-205ENST00000483178 KIF13AQ9H1H9 1805 aa20.33■□□□□ 0.85
SIM2-205ENST00000483178 CEP170Q5SW79 1584 aa20.32■□□□□ 0.84
SIM2-205ENST00000483178 ABCC10Q5T3U5 1492 aa20.3■□□□□ 0.84
SIM2-205ENST00000483178 NPM1P06748 294 aaKnown RBP eCLIP20.3■□□□□ 0.84
SIM2-205ENST00000483178 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
SIM2-205ENST00000483178 CUX1P39880 1505 aa20.27■□□□□ 0.83
SIM2-205ENST00000483178 NUP160Q12769 1436 aa20.26■□□□□ 0.83
SIM2-205ENST00000483178 KDM6BO15054 1643 aa20.23■□□□□ 0.83
SIM2-205ENST00000483178 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
SIM2-205ENST00000483178 PRG4Q92954 1404 aaPredicted RBP20.19■□□□□ 0.82
SIM2-205ENST00000483178 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
SIM2-205ENST00000483178 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
SIM2-205ENST00000483178 MAPKBP1O60336 1514 aa20.15■□□□□ 0.82
SIM2-205ENST00000483178 DIP2BQ9P265 1576 aa20.14■□□□□ 0.81
SIM2-205ENST00000483178 JPH4Q96JJ6 628 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms