RNA–Protein interactions for RNA: ENST00000483168.5

ITGB5-208, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-208ENST00000483168 NISCHQ9Y2I1 1504 aa36.32■■■■□ 3.4
ITGB5-208ENST00000483168 CCDC180Q9P1Z9 1646 aa32.35■■■□□ 2.77
ITGB5-208ENST00000483168 ABCC9O60706 1549 aa31.34■■■□□ 2.61
ITGB5-208ENST00000483168 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
ITGB5-208ENST00000483168 NACADO15069 1562 aa30.31■■■□□ 2.44
ITGB5-208ENST00000483168 RB1CC1Q8TDY2 1594 aa30.31■■■□□ 2.44
ITGB5-208ENST00000483168 MYO15BQ96JP2 1530 aa30.2■■■□□ 2.42
ITGB5-208ENST00000483168 DCAF1Q9Y4B6 1507 aa30.11■■■□□ 2.41
ITGB5-208ENST00000483168 DCAF8L2P0C7V8 631 aa30.09■■■□□ 2.41
ITGB5-208ENST00000483168 UNC13AQ9UPW8 1703 aa29.71■■■□□ 2.35
ITGB5-208ENST00000483168 SCRIBQ14160 1630 aa29.43■■■□□ 2.3
ITGB5-208ENST00000483168 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
ITGB5-208ENST00000483168 PABPN1Q86U42 306 aaKnown RBP eCLIP29.22■■■□□ 2.27
ITGB5-208ENST00000483168 SHROOM4Q9ULL8 1493 aa29.15■■■□□ 2.26
ITGB5-208ENST00000483168 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
ITGB5-208ENST00000483168 DNAJC5BQ9UF47 199 aa28.54■■■□□ 2.16
ITGB5-208ENST00000483168 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
ITGB5-208ENST00000483168 CECR2Q9BXF3 1484 aa28.22■■■□□ 2.11
ITGB5-208ENST00000483168 SMARCA4P51532 1647 aa28.2■■■□□ 2.1
ITGB5-208ENST00000483168 BAZ1AQ9NRL2 1556 aaPredicted RBP28.17■■■□□ 2.1
ITGB5-208ENST00000483168 SMARCA2P51531 1590 aa27.98■■■□□ 2.07
ITGB5-208ENST00000483168 MROH2BQ7Z745 1585 aa27.97■■■□□ 2.07
ITGB5-208ENST00000483168 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
ITGB5-208ENST00000483168 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
ITGB5-208ENST00000483168 NCAPD3P42695 1498 aa27.91■■■□□ 2.06
ITGB5-208ENST00000483168 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
ITGB5-208ENST00000483168 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
ITGB5-208ENST00000483168 WIZO95785 1651 aa27.71■■■□□ 2.03
ITGB5-208ENST00000483168 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
ITGB5-208ENST00000483168 TOP2AP11388 1531 aaKnown RBP27.45■■□□□ 1.98
ITGB5-208ENST00000483168 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
ITGB5-208ENST00000483168 NESP48681 1621 aa27.17■■□□□ 1.94
ITGB5-208ENST00000483168 CADPSQ9ULU8 1353 aa27.07■■□□□ 1.92
ITGB5-208ENST00000483168 CCDC88BA6NC98 1476 aa27.05■■□□□ 1.92
ITGB5-208ENST00000483168 ERCC6Q03468 1493 aa27.03■■□□□ 1.92
ITGB5-208ENST00000483168 CFTRP13569 1480 aa26.98■■□□□ 1.91
ITGB5-208ENST00000483168 PRDM2Q13029 1718 aa26.97■■□□□ 1.91
ITGB5-208ENST00000483168 SUPT5HO00267 1087 aaKnown RBP26.97■■□□□ 1.91
ITGB5-208ENST00000483168 KIF21AQ7Z4S6 1674 aa26.97■■□□□ 1.91
ITGB5-208ENST00000483168 PDS5BQ9NTI5 1447 aa26.96■■□□□ 1.91
ITGB5-208ENST00000483168 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
ITGB5-208ENST00000483168 FANCD2Q9BXW9 1451 aa26.8■■□□□ 1.88
ITGB5-208ENST00000483168 CEP164Q9UPV0 1460 aa26.78■■□□□ 1.88
ITGB5-208ENST00000483168 CUX2O14529 1486 aa26.74■■□□□ 1.87
ITGB5-208ENST00000483168 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
ITGB5-208ENST00000483168 WDR62O43379 1518 aa26.64■■□□□ 1.85
ITGB5-208ENST00000483168 URB2Q14146 1524 aaKnown RBP26.53■■□□□ 1.84
ITGB5-208ENST00000483168 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
ITGB5-208ENST00000483168 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
ITGB5-208ENST00000483168 TOPBP1Q92547 1522 aa26.39■■□□□ 1.82
ITGB5-208ENST00000483168 CUX1P39880 1505 aa26.25■■□□□ 1.79
ITGB5-208ENST00000483168 IFT140Q96RY7 1462 aa26.2■■□□□ 1.78
ITGB5-208ENST00000483168 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
ITGB5-208ENST00000483168 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.77
ITGB5-208ENST00000483168 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.77
ITGB5-208ENST00000483168 FGD5Q6ZNL6 1462 aa26.13■■□□□ 1.77
ITGB5-208ENST00000483168 WRNQ14191 1432 aaPredicted RBP eCLIP26.11■■□□□ 1.77
ITGB5-208ENST00000483168 TOP2BQ02880 1626 aa26.1■■□□□ 1.77
ITGB5-208ENST00000483168 SYNJ1O43426 1573 aa26.08■■□□□ 1.77
ITGB5-208ENST00000483168 ZNF608Q9ULD9 1512 aaPredicted RBP26.03■■□□□ 1.76
ITGB5-208ENST00000483168 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
ITGB5-208ENST00000483168 SOGA1O94964 1423 aa26.02■■□□□ 1.76
ITGB5-208ENST00000483168 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
ITGB5-208ENST00000483168 RAD54L2Q9Y4B4 1467 aa26.01■■□□□ 1.75
ITGB5-208ENST00000483168 ABCA10Q8WWZ4 1543 aa25.9■■□□□ 1.74
ITGB5-208ENST00000483168 AQRO60306 1485 aaKnown RBP eCLIP25.87■■□□□ 1.73
ITGB5-208ENST00000483168 ABCA5Q8WWZ7 1642 aa25.84■■□□□ 1.73
ITGB5-208ENST00000483168 TDRD9Q8NDG6 1382 aaKnown RBP25.83■■□□□ 1.73
ITGB5-208ENST00000483168 PBRM1Q86U86 1689 aa25.81■■□□□ 1.72
ITGB5-208ENST00000483168 GAPVD1Q14C86 1478 aa25.76■■□□□ 1.71
ITGB5-208ENST00000483168 GRIN2BQ13224 1484 aa25.75■■□□□ 1.71
ITGB5-208ENST00000483168 CHD1O14646 1710 aa25.7■■□□□ 1.7
ITGB5-208ENST00000483168 MAGI1Q96QZ7 1491 aaPredicted RBP25.7■■□□□ 1.7
ITGB5-208ENST00000483168 SNAPC4Q5SXM2 1469 aa25.69■■□□□ 1.7
ITGB5-208ENST00000483168 DNAJC5Q9H3Z4 198 aa25.63■■□□□ 1.69
ITGB5-208ENST00000483168 ERICH3Q5RHP9 1530 aa25.62■■□□□ 1.69
ITGB5-208ENST00000483168 ADAMTS12P58397 1594 aa25.58■■□□□ 1.69
ITGB5-208ENST00000483168 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
ITGB5-208ENST00000483168 KIF27Q86VH2 1401 aa25.55■■□□□ 1.68
ITGB5-208ENST00000483168 OSCARQ8IYS5 282 aa25.54■■□□□ 1.68
ITGB5-208ENST00000483168 TRIM41Q8WV44 630 aa25.49■■□□□ 1.67
ITGB5-208ENST00000483168 FHAD1B1AJZ9 1412 aa25.47■■□□□ 1.67
ITGB5-208ENST00000483168 FBLN2P98095 1184 aa25.47■■□□□ 1.67
ITGB5-208ENST00000483168 CUL7Q14999 1698 aa25.46■■□□□ 1.67
ITGB5-208ENST00000483168 CHMP7Q8WUX9 453 aaPredicted RBP25.45■■□□□ 1.66
ITGB5-208ENST00000483168 GRIN2AQ12879 1464 aa25.43■■□□□ 1.66
ITGB5-208ENST00000483168 CLASP1Q7Z460 1538 aa25.38■■□□□ 1.65
ITGB5-208ENST00000483168 IGF1RP08069 1367 aa25.38■■□□□ 1.65
ITGB5-208ENST00000483168 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
ITGB5-208ENST00000483168 NUP160Q12769 1436 aa25.31■■□□□ 1.64
ITGB5-208ENST00000483168 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
ITGB5-208ENST00000483168 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
ITGB5-208ENST00000483168 CARMIL1Q5VZK9 1371 aa25.25■■□□□ 1.63
ITGB5-208ENST00000483168 RIMBP3CA6NJZ7 1639 aa25.23■■□□□ 1.63
ITGB5-208ENST00000483168 RIMBP3BA6NNM3 1639 aa25.23■■□□□ 1.63
ITGB5-208ENST00000483168 RIMBP3Q9UFD9 1639 aa25.23■■□□□ 1.63
ITGB5-208ENST00000483168 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
ITGB5-208ENST00000483168 EEA1Q15075 1411 aa25.19■■□□□ 1.62
ITGB5-208ENST00000483168 SHROOM2Q13796 1616 aa25.16■■□□□ 1.62
ITGB5-208ENST00000483168 RAPGEF2Q9Y4G8 1499 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms