RNA–Protein interactions for RNA: ENST00000483158.1

IGKV3-11-201, Transcript of immunoglobulin kappa variable 3-11, humanhuman

APPRIS P1 BASIC

Gene IGKV3-11, Length 392 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11-201ENST00000483158 NISCHQ9Y2I1 1504 aa31.55■■■□□ 2.64
IGKV3-11-201ENST00000483158 CCDC180Q9P1Z9 1646 aa28.33■■■□□ 2.13
IGKV3-11-201ENST00000483158 ABCC9O60706 1549 aa27.77■■■□□ 2.04
IGKV3-11-201ENST00000483158 RB1CC1Q8TDY2 1594 aa26.69■■□□□ 1.86
IGKV3-11-201ENST00000483158 NACADO15069 1562 aa26.57■■□□□ 1.84
IGKV3-11-201ENST00000483158 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
IGKV3-11-201ENST00000483158 ZCCHC6Q5VYS8 1495 aaKnown RBP26.29■■□□□ 1.8
IGKV3-11-201ENST00000483158 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
IGKV3-11-201ENST00000483158 DCAF8L2P0C7V8 631 aa26.21■■□□□ 1.79
IGKV3-11-201ENST00000483158 DCAF1Q9Y4B6 1507 aa26.13■■□□□ 1.77
IGKV3-11-201ENST00000483158 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
IGKV3-11-201ENST00000483158 PABPN1Q86U42 306 aaKnown RBP eCLIP25.77■■□□□ 1.72
IGKV3-11-201ENST00000483158 SCRIBQ14160 1630 aa25.76■■□□□ 1.71
IGKV3-11-201ENST00000483158 SHROOM4Q9ULL8 1493 aa25.61■■□□□ 1.69
IGKV3-11-201ENST00000483158 DNAJC5BQ9UF47 199 aa25.57■■□□□ 1.68
IGKV3-11-201ENST00000483158 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
IGKV3-11-201ENST00000483158 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
IGKV3-11-201ENST00000483158 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
IGKV3-11-201ENST00000483158 SMARCA4P51532 1647 aa24.62■■□□□ 1.53
IGKV3-11-201ENST00000483158 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
IGKV3-11-201ENST00000483158 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
IGKV3-11-201ENST00000483158 NCAPD3P42695 1498 aa24.44■■□□□ 1.5
IGKV3-11-201ENST00000483158 ATAD2BQ9ULI0 1458 aa24.44■■□□□ 1.5
IGKV3-11-201ENST00000483158 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
IGKV3-11-201ENST00000483158 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
IGKV3-11-201ENST00000483158 MROH2BQ7Z745 1585 aa24.31■■□□□ 1.48
IGKV3-11-201ENST00000483158 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
IGKV3-11-201ENST00000483158 WIZO95785 1651 aa24.11■■□□□ 1.45
IGKV3-11-201ENST00000483158 NESP48681 1621 aa23.98■■□□□ 1.43
IGKV3-11-201ENST00000483158 ERCC6Q03468 1493 aa23.96■■□□□ 1.43
IGKV3-11-201ENST00000483158 LAMC3Q9Y6N6 1575 aa23.94■■□□□ 1.42
IGKV3-11-201ENST00000483158 RSF1Q96T23 1441 aaPredicted RBP23.88■■□□□ 1.41
IGKV3-11-201ENST00000483158 KIF21AQ7Z4S6 1674 aa23.84■■□□□ 1.41
IGKV3-11-201ENST00000483158 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
IGKV3-11-201ENST00000483158 CUX2O14529 1486 aa23.83■■□□□ 1.41
IGKV3-11-201ENST00000483158 THOC2Q8NI27 1593 aaKnown RBP23.81■■□□□ 1.4
IGKV3-11-201ENST00000483158 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
IGKV3-11-201ENST00000483158 PDS5BQ9NTI5 1447 aa23.67■■□□□ 1.38
IGKV3-11-201ENST00000483158 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
IGKV3-11-201ENST00000483158 CFTRP13569 1480 aa23.54■■□□□ 1.36
IGKV3-11-201ENST00000483158 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
IGKV3-11-201ENST00000483158 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
IGKV3-11-201ENST00000483158 WDR62O43379 1518 aa23.5■■□□□ 1.35
IGKV3-11-201ENST00000483158 FANCD2Q9BXW9 1451 aa23.48■■□□□ 1.35
IGKV3-11-201ENST00000483158 CCDC88BA6NC98 1476 aa23.44■■□□□ 1.34
IGKV3-11-201ENST00000483158 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
IGKV3-11-201ENST00000483158 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
IGKV3-11-201ENST00000483158 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
IGKV3-11-201ENST00000483158 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
IGKV3-11-201ENST00000483158 ABCC8Q09428 1581 aa23.04■■□□□ 1.28
IGKV3-11-201ENST00000483158 IFT140Q96RY7 1462 aa22.99■■□□□ 1.27
IGKV3-11-201ENST00000483158 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
IGKV3-11-201ENST00000483158 EIF4G3O43432 1585 aaKnown RBP22.94■■□□□ 1.26
IGKV3-11-201ENST00000483158 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
IGKV3-11-201ENST00000483158 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
IGKV3-11-201ENST00000483158 POLA1P09884 1462 aaPredicted RBP22.88■■□□□ 1.25
IGKV3-11-201ENST00000483158 CUX1P39880 1505 aa22.85■■□□□ 1.25
IGKV3-11-201ENST00000483158 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
IGKV3-11-201ENST00000483158 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
IGKV3-11-201ENST00000483158 CHD1O14646 1710 aa22.74■■□□□ 1.23
IGKV3-11-201ENST00000483158 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
IGKV3-11-201ENST00000483158 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.22
IGKV3-11-201ENST00000483158 SOGA1O94964 1423 aa22.68■■□□□ 1.22
IGKV3-11-201ENST00000483158 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
IGKV3-11-201ENST00000483158 PBRM1Q86U86 1689 aa22.65■■□□□ 1.22
IGKV3-11-201ENST00000483158 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
IGKV3-11-201ENST00000483158 SYNJ1O43426 1573 aa22.61■■□□□ 1.21
IGKV3-11-201ENST00000483158 OSCARQ8IYS5 282 aa22.61■■□□□ 1.21
IGKV3-11-201ENST00000483158 ABCA5Q8WWZ7 1642 aa22.6■■□□□ 1.21
IGKV3-11-201ENST00000483158 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.21
IGKV3-11-201ENST00000483158 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
IGKV3-11-201ENST00000483158 ABCA10Q8WWZ4 1543 aa22.56■■□□□ 1.2
IGKV3-11-201ENST00000483158 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
IGKV3-11-201ENST00000483158 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
IGKV3-11-201ENST00000483158 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
IGKV3-11-201ENST00000483158 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
IGKV3-11-201ENST00000483158 MAGI1Q96QZ7 1491 aaPredicted RBP22.53■■□□□ 1.2
IGKV3-11-201ENST00000483158 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
IGKV3-11-201ENST00000483158 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
IGKV3-11-201ENST00000483158 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
IGKV3-11-201ENST00000483158 SYNJ2O15056 1496 aa22.42■■□□□ 1.18
IGKV3-11-201ENST00000483158 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
IGKV3-11-201ENST00000483158 ADAMTS12P58397 1594 aa22.4■■□□□ 1.18
IGKV3-11-201ENST00000483158 FBLN2P98095 1184 aa22.37■■□□□ 1.17
IGKV3-11-201ENST00000483158 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
IGKV3-11-201ENST00000483158 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
IGKV3-11-201ENST00000483158 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
IGKV3-11-201ENST00000483158 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
IGKV3-11-201ENST00000483158 ARAP1Q96P48 1450 aa22.24■■□□□ 1.15
IGKV3-11-201ENST00000483158 CEP170Q5SW79 1584 aa22.22■■□□□ 1.15
IGKV3-11-201ENST00000483158 FHAD1B1AJZ9 1412 aa22.21■■□□□ 1.15
IGKV3-11-201ENST00000483158 NUP160Q12769 1436 aa22.16■■□□□ 1.14
IGKV3-11-201ENST00000483158 CUL7Q14999 1698 aa22.14■■□□□ 1.13
IGKV3-11-201ENST00000483158 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
IGKV3-11-201ENST00000483158 RUSC2Q8N2Y8 1516 aa22.09■■□□□ 1.13
IGKV3-11-201ENST00000483158 KIF27Q86VH2 1401 aa22.07■■□□□ 1.12
IGKV3-11-201ENST00000483158 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
IGKV3-11-201ENST00000483158 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
IGKV3-11-201ENST00000483158 IGF1RP08069 1367 aa21.94■■□□□ 1.1
IGKV3-11-201ENST00000483158 PRG4Q92954 1404 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms