RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 NISCHQ9Y2I1 1504 aa30.16■■■□□ 2.42
HDLBP-239ENST00000483086 CCDC180Q9P1Z9 1646 aa26.93■■□□□ 1.9
HDLBP-239ENST00000483086 ABCC9O60706 1549 aa26.62■■□□□ 1.85
HDLBP-239ENST00000483086 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
HDLBP-239ENST00000483086 NACADO15069 1562 aa25.32■■□□□ 1.64
HDLBP-239ENST00000483086 DCAF8L2P0C7V8 631 aa25.18■■□□□ 1.62
HDLBP-239ENST00000483086 UNC13AQ9UPW8 1703 aa25.09■■□□□ 1.61
HDLBP-239ENST00000483086 ZCCHC6Q5VYS8 1495 aaKnown RBP25.08■■□□□ 1.6
HDLBP-239ENST00000483086 MYO15BQ96JP2 1530 aa25.07■■□□□ 1.6
HDLBP-239ENST00000483086 DCAF1Q9Y4B6 1507 aa24.89■■□□□ 1.57
HDLBP-239ENST00000483086 BICRAQ9NZM4 1560 aa24.83■■□□□ 1.57
HDLBP-239ENST00000483086 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
HDLBP-239ENST00000483086 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
HDLBP-239ENST00000483086 SCRIBQ14160 1630 aa24.6■■□□□ 1.53
HDLBP-239ENST00000483086 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
HDLBP-239ENST00000483086 EIF4G1Q04637 1599 aaKnown RBP24.11■■□□□ 1.45
HDLBP-239ENST00000483086 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
HDLBP-239ENST00000483086 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
HDLBP-239ENST00000483086 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
HDLBP-239ENST00000483086 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.34
HDLBP-239ENST00000483086 NCAPD3P42695 1498 aa23.38■■□□□ 1.33
HDLBP-239ENST00000483086 BAZ1AQ9NRL2 1556 aaPredicted RBP23.34■■□□□ 1.33
HDLBP-239ENST00000483086 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
HDLBP-239ENST00000483086 SMARCA2P51531 1590 aa23.29■■□□□ 1.32
HDLBP-239ENST00000483086 HMGXB3Q12766 1538 aa23.26■■□□□ 1.31
HDLBP-239ENST00000483086 PEG3Q9GZU2 1588 aa23.24■■□□□ 1.31
HDLBP-239ENST00000483086 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
HDLBP-239ENST00000483086 WIZO95785 1651 aa23.06■■□□□ 1.28
HDLBP-239ENST00000483086 NESP48681 1621 aa23.03■■□□□ 1.28
HDLBP-239ENST00000483086 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
HDLBP-239ENST00000483086 ERCC6Q03468 1493 aa22.86■■□□□ 1.25
HDLBP-239ENST00000483086 LAMC3Q9Y6N6 1575 aa22.81■■□□□ 1.24
HDLBP-239ENST00000483086 KIF21AQ7Z4S6 1674 aa22.77■■□□□ 1.24
HDLBP-239ENST00000483086 THOC2Q8NI27 1593 aaKnown RBP22.74■■□□□ 1.23
HDLBP-239ENST00000483086 CUX2O14529 1486 aa22.73■■□□□ 1.23
HDLBP-239ENST00000483086 TOP2AP11388 1531 aaKnown RBP22.71■■□□□ 1.23
HDLBP-239ENST00000483086 CADPSQ9ULU8 1353 aa22.66■■□□□ 1.22
HDLBP-239ENST00000483086 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.21
HDLBP-239ENST00000483086 CFTRP13569 1480 aa22.51■■□□□ 1.19
HDLBP-239ENST00000483086 CCDC88BA6NC98 1476 aa22.46■■□□□ 1.19
HDLBP-239ENST00000483086 MRC2Q9UBG0 1479 aa22.44■■□□□ 1.18
HDLBP-239ENST00000483086 WDR62O43379 1518 aa22.43■■□□□ 1.18
HDLBP-239ENST00000483086 FANCD2Q9BXW9 1451 aa22.43■■□□□ 1.18
HDLBP-239ENST00000483086 PRDM2Q13029 1718 aa22.42■■□□□ 1.18
HDLBP-239ENST00000483086 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
HDLBP-239ENST00000483086 DNAJC5Q9H3Z4 198 aa22.37■■□□□ 1.17
HDLBP-239ENST00000483086 URB2Q14146 1524 aaKnown RBP22.31■■□□□ 1.16
HDLBP-239ENST00000483086 TOPBP1Q92547 1522 aa22.08■■□□□ 1.13
HDLBP-239ENST00000483086 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
HDLBP-239ENST00000483086 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
HDLBP-239ENST00000483086 ZNF608Q9ULD9 1512 aaPredicted RBP21.99■■□□□ 1.11
HDLBP-239ENST00000483086 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
HDLBP-239ENST00000483086 TARBP1Q13395 1621 aaKnown RBP21.92■■□□□ 1.1
HDLBP-239ENST00000483086 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
HDLBP-239ENST00000483086 POLA1P09884 1462 aaPredicted RBP21.88■■□□□ 1.09
HDLBP-239ENST00000483086 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
HDLBP-239ENST00000483086 CUX1P39880 1505 aa21.86■■□□□ 1.09
HDLBP-239ENST00000483086 RAD54L2Q9Y4B4 1467 aa21.82■■□□□ 1.08
HDLBP-239ENST00000483086 AQRO60306 1485 aaKnown RBP eCLIP21.78■■□□□ 1.082e-8■■■■□ 24.2
HDLBP-239ENST00000483086 FGD5Q6ZNL6 1462 aa21.78■■□□□ 1.08
HDLBP-239ENST00000483086 WDR97A6NE52 1622 aa21.72■■□□□ 1.07
HDLBP-239ENST00000483086 SOGA1O94964 1423 aa21.71■■□□□ 1.07
HDLBP-239ENST00000483086 CHD1O14646 1710 aa21.7■■□□□ 1.06
HDLBP-239ENST00000483086 OSCARQ8IYS5 282 aa21.69■■□□□ 1.06
HDLBP-239ENST00000483086 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
HDLBP-239ENST00000483086 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
HDLBP-239ENST00000483086 BIVM-ERCC5R4GMW8 1640 aa21.6■■□□□ 1.05
HDLBP-239ENST00000483086 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
HDLBP-239ENST00000483086 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
HDLBP-239ENST00000483086 SNAPC4Q5SXM2 1469 aa21.56■■□□□ 1.04
HDLBP-239ENST00000483086 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
HDLBP-239ENST00000483086 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
HDLBP-239ENST00000483086 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
HDLBP-239ENST00000483086 ABCA5Q8WWZ7 1642 aa21.55■■□□□ 1.04
HDLBP-239ENST00000483086 ABCA10Q8WWZ4 1543 aa21.53■■□□□ 1.04
HDLBP-239ENST00000483086 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
HDLBP-239ENST00000483086 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
HDLBP-239ENST00000483086 GRIN2BQ13224 1484 aa21.49■■□□□ 1.03
HDLBP-239ENST00000483086 GAPVD1Q14C86 1478 aa21.47■■□□□ 1.03
HDLBP-239ENST00000483086 ARHGEF11O15085 1522 aa21.47■■□□□ 1.03
HDLBP-239ENST00000483086 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.03
HDLBP-239ENST00000483086 FBLN2P98095 1184 aa21.45■■□□□ 1.02
HDLBP-239ENST00000483086 CLASP1Q7Z460 1538 aa21.41■■□□□ 1.02
HDLBP-239ENST00000483086 SYNJ2O15056 1496 aa21.39■■□□□ 1.02
HDLBP-239ENST00000483086 ADAMTS12P58397 1594 aa21.34■■□□□ 1.01
HDLBP-239ENST00000483086 CHMP7Q8WUX9 453 aaPredicted RBP21.33■■□□□ 1.01
HDLBP-239ENST00000483086 ARAP1Q96P48 1450 aa21.31■■□□□ 1
HDLBP-239ENST00000483086 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
HDLBP-239ENST00000483086 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
HDLBP-239ENST00000483086 CEP170Q5SW79 1584 aa21.24■□□□□ 0.99
HDLBP-239ENST00000483086 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
HDLBP-239ENST00000483086 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
HDLBP-239ENST00000483086 NUP160Q12769 1436 aa21.18■□□□□ 0.98
HDLBP-239ENST00000483086 ERCC6L2Q5T890 1561 aa21.18■□□□□ 0.98
HDLBP-239ENST00000483086 SHROOM2Q13796 1616 aa21.11■□□□□ 0.97
HDLBP-239ENST00000483086 IGF1RP08069 1367 aa21.06■□□□□ 0.96
HDLBP-239ENST00000483086 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
HDLBP-239ENST00000483086 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
HDLBP-239ENST00000483086 CUL7Q14999 1698 aa21.02■□□□□ 0.95
HDLBP-239ENST00000483086 PRG4Q92954 1404 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms