RNA–Protein interactions for RNA: ENST00000483069.5

SFMBT1-205, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 4

Gene SFMBT1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-205ENST00000483069 NISCHQ9Y2I1 1504 aa36.13■■■■□ 3.37
SFMBT1-205ENST00000483069 CCDC180Q9P1Z9 1646 aa32.47■■■□□ 2.79
SFMBT1-205ENST00000483069 ABCC9O60706 1549 aa32.4■■■□□ 2.78
SFMBT1-205ENST00000483069 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
SFMBT1-205ENST00000483069 NACADO15069 1562 aa30.63■■■□□ 2.49
SFMBT1-205ENST00000483069 DNAJC5BQ9UF47 199 aa30.39■■■□□ 2.46
SFMBT1-205ENST00000483069 DCAF8L2P0C7V8 631 aa30.3■■■□□ 2.44
SFMBT1-205ENST00000483069 UNC13AQ9UPW8 1703 aa30.27■■■□□ 2.44
SFMBT1-205ENST00000483069 MYO15BQ96JP2 1530 aa30.23■■■□□ 2.43
SFMBT1-205ENST00000483069 PABPN1Q86U42 306 aaKnown RBP eCLIP30.1■■■□□ 2.41
SFMBT1-205ENST00000483069 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
SFMBT1-205ENST00000483069 ZCCHC6Q5VYS8 1495 aaKnown RBP29.98■■■□□ 2.39
SFMBT1-205ENST00000483069 DCAF1Q9Y4B6 1507 aa29.85■■■□□ 2.37
SFMBT1-205ENST00000483069 SCRIBQ14160 1630 aa29.57■■■□□ 2.32
SFMBT1-205ENST00000483069 SHROOM4Q9ULL8 1493 aa29.55■■■□□ 2.32
SFMBT1-205ENST00000483069 CC2D2AQ9P2K1 1620 aa29.31■■■□□ 2.28
SFMBT1-205ENST00000483069 EIF4G1Q04637 1599 aaKnown RBP29.25■■■□□ 2.27
SFMBT1-205ENST00000483069 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
SFMBT1-205ENST00000483069 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
SFMBT1-205ENST00000483069 SMARCA4P51532 1647 aa28.21■■■□□ 2.11
SFMBT1-205ENST00000483069 ATAD2BQ9ULI0 1458 aa28.2■■■□□ 2.1
SFMBT1-205ENST00000483069 HMGXB3Q12766 1538 aa28.11■■■□□ 2.09
SFMBT1-205ENST00000483069 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
SFMBT1-205ENST00000483069 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
SFMBT1-205ENST00000483069 PEG3Q9GZU2 1588 aa27.95■■■□□ 2.07
SFMBT1-205ENST00000483069 CUX2O14529 1486 aa27.91■■■□□ 2.06
SFMBT1-205ENST00000483069 ERCC6Q03468 1493 aa27.91■■■□□ 2.06
SFMBT1-205ENST00000483069 BAZ1BQ9UIG0 1483 aaKnown RBP27.9■■■□□ 2.06
SFMBT1-205ENST00000483069 NESP48681 1621 aa27.87■■■□□ 2.05
SFMBT1-205ENST00000483069 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
SFMBT1-205ENST00000483069 DNAJC5Q9H3Z4 198 aa27.83■■■□□ 2.05
SFMBT1-205ENST00000483069 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
SFMBT1-205ENST00000483069 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
SFMBT1-205ENST00000483069 KIF21AQ7Z4S6 1674 aa27.56■■■□□ 2
SFMBT1-205ENST00000483069 WIZO95785 1651 aa27.55■■■□□ 2
SFMBT1-205ENST00000483069 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
SFMBT1-205ENST00000483069 CADPSQ9ULU8 1353 aa27.37■■□□□ 1.97
SFMBT1-205ENST00000483069 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
SFMBT1-205ENST00000483069 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
SFMBT1-205ENST00000483069 WDR62O43379 1518 aa27.22■■□□□ 1.95
SFMBT1-205ENST00000483069 TOP2AP11388 1531 aaKnown RBP27.17■■□□□ 1.94
SFMBT1-205ENST00000483069 CFTRP13569 1480 aa27.12■■□□□ 1.93
SFMBT1-205ENST00000483069 CEP164Q9UPV0 1460 aa27.12■■□□□ 1.93
SFMBT1-205ENST00000483069 FANCD2Q9BXW9 1451 aa27.09■■□□□ 1.93
SFMBT1-205ENST00000483069 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
SFMBT1-205ENST00000483069 URB2Q14146 1524 aaKnown RBP26.92■■□□□ 1.9
SFMBT1-205ENST00000483069 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
SFMBT1-205ENST00000483069 TOPBP1Q92547 1522 aa26.61■■□□□ 1.85
SFMBT1-205ENST00000483069 ZNF608Q9ULD9 1512 aaPredicted RBP26.59■■□□□ 1.85
SFMBT1-205ENST00000483069 IFT140Q96RY7 1462 aa26.57■■□□□ 1.84
SFMBT1-205ENST00000483069 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
SFMBT1-205ENST00000483069 DNMBPQ6XZF7 1577 aa26.52■■□□□ 1.84
SFMBT1-205ENST00000483069 OSCARQ8IYS5 282 aa26.52■■□□□ 1.84
SFMBT1-205ENST00000483069 EIF4G3O43432 1585 aaKnown RBP26.47■■□□□ 1.83
SFMBT1-205ENST00000483069 ABCC8Q09428 1581 aa26.47■■□□□ 1.83
SFMBT1-205ENST00000483069 TARBP1Q13395 1621 aaKnown RBP26.42■■□□□ 1.82
SFMBT1-205ENST00000483069 RIMBP3CA6NJZ7 1639 aa26.35■■□□□ 1.81
SFMBT1-205ENST00000483069 RIMBP3BA6NNM3 1639 aa26.35■■□□□ 1.81
SFMBT1-205ENST00000483069 RIMBP3Q9UFD9 1639 aa26.35■■□□□ 1.81
SFMBT1-205ENST00000483069 POLA1P09884 1462 aaPredicted RBP26.35■■□□□ 1.81
SFMBT1-205ENST00000483069 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.8
SFMBT1-205ENST00000483069 CHD1O14646 1710 aa26.28■■□□□ 1.8
SFMBT1-205ENST00000483069 ARHGEF11O15085 1522 aa26.24■■□□□ 1.79
SFMBT1-205ENST00000483069 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
SFMBT1-205ENST00000483069 CUX1P39880 1505 aa26.18■■□□□ 1.78
SFMBT1-205ENST00000483069 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
SFMBT1-205ENST00000483069 SOGA1O94964 1423 aa26.14■■□□□ 1.78
SFMBT1-205ENST00000483069 TDRD9Q8NDG6 1382 aaKnown RBP26.11■■□□□ 1.77
SFMBT1-205ENST00000483069 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
SFMBT1-205ENST00000483069 SNAPC4Q5SXM2 1469 aa26.05■■□□□ 1.76
SFMBT1-205ENST00000483069 ARAP1Q96P48 1450 aa26■■□□□ 1.75
SFMBT1-205ENST00000483069 FBLN2P98095 1184 aa26■■□□□ 1.75
SFMBT1-205ENST00000483069 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
SFMBT1-205ENST00000483069 MAGI1Q96QZ7 1491 aaPredicted RBP25.97■■□□□ 1.75
SFMBT1-205ENST00000483069 GRIN2BQ13224 1484 aa25.95■■□□□ 1.74
SFMBT1-205ENST00000483069 PBRM1Q86U86 1689 aa25.95■■□□□ 1.74
SFMBT1-205ENST00000483069 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
SFMBT1-205ENST00000483069 CYB5RLQ6IPT4 315 aa25.92■■□□□ 1.74
SFMBT1-205ENST00000483069 ABCA5Q8WWZ7 1642 aa25.9■■□□□ 1.74
SFMBT1-205ENST00000483069 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
SFMBT1-205ENST00000483069 SYNJ2O15056 1496 aa25.88■■□□□ 1.73
SFMBT1-205ENST00000483069 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
SFMBT1-205ENST00000483069 GAPVD1Q14C86 1478 aa25.85■■□□□ 1.73
SFMBT1-205ENST00000483069 CHMP7Q8WUX9 453 aaPredicted RBP25.82■■□□□ 1.72
SFMBT1-205ENST00000483069 BIVM-ERCC5R4GMW8 1640 aa25.78■■□□□ 1.72
SFMBT1-205ENST00000483069 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
SFMBT1-205ENST00000483069 WRNQ14191 1432 aaPredicted RBP eCLIP25.7■■□□□ 1.7
SFMBT1-205ENST00000483069 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
SFMBT1-205ENST00000483069 GRIN2AQ12879 1464 aa25.65■■□□□ 1.7
SFMBT1-205ENST00000483069 CEP170Q5SW79 1584 aa25.61■■□□□ 1.69
SFMBT1-205ENST00000483069 TRHP20396 242 aaPredicted RBP25.59■■□□□ 1.69
SFMBT1-205ENST00000483069 ERCC6L2Q5T890 1561 aa25.59■■□□□ 1.69
SFMBT1-205ENST00000483069 NUP160Q12769 1436 aa25.57■■□□□ 1.68
SFMBT1-205ENST00000483069 ERICH3Q5RHP9 1530 aa25.54■■□□□ 1.68
SFMBT1-205ENST00000483069 FHAD1B1AJZ9 1412 aa25.52■■□□□ 1.68
SFMBT1-205ENST00000483069 SHROOM2Q13796 1616 aa25.52■■□□□ 1.68
SFMBT1-205ENST00000483069 RUSC2Q8N2Y8 1516 aa25.34■■□□□ 1.65
SFMBT1-205ENST00000483069 PRG4Q92954 1404 aaPredicted RBP25.27■■□□□ 1.64
SFMBT1-205ENST00000483069 JPH4Q96JJ6 628 aa25.2■■□□□ 1.62
SFMBT1-205ENST00000483069 CUL7Q14999 1698 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms