RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 NISCHQ9Y2I1 1504 aa41.24■■■■■ 4.19
RAB11FIP3-209ENST00000483002 ABCC9O60706 1549 aa36.95■■■■□ 3.5
RAB11FIP3-209ENST00000483002 CCDC180Q9P1Z9 1646 aa36.88■■■■□ 3.49
RAB11FIP3-209ENST00000483002 RB1CC1Q8TDY2 1594 aa35.13■■■■□ 3.21
RAB11FIP3-209ENST00000483002 DCAF8L2P0C7V8 631 aa34.99■■■■□ 3.19
RAB11FIP3-209ENST00000483002 NACADO15069 1562 aa34.91■■■■□ 3.18
RAB11FIP3-209ENST00000483002 DNAJC5BQ9UF47 199 aa34.64■■■■□ 3.14
RAB11FIP3-209ENST00000483002 PABPN1Q86U42 306 aaKnown RBP eCLIP34.49■■■■□ 3.11
RAB11FIP3-209ENST00000483002 MYO15BQ96JP2 1530 aa34.41■■■■□ 3.1
RAB11FIP3-209ENST00000483002 UNC13AQ9UPW8 1703 aa34.3■■■■□ 3.08
RAB11FIP3-209ENST00000483002 ZCCHC6Q5VYS8 1495 aaKnown RBP34.16■■■■□ 3.06
RAB11FIP3-209ENST00000483002 BICRAQ9NZM4 1560 aa34.1■■■■□ 3.05
RAB11FIP3-209ENST00000483002 DCAF1Q9Y4B6 1507 aa34.01■■■■□ 3.04
RAB11FIP3-209ENST00000483002 SCRIBQ14160 1630 aa33.7■■■□□ 2.99
RAB11FIP3-209ENST00000483002 SHROOM4Q9ULL8 1493 aa33.58■■■□□ 2.97
RAB11FIP3-209ENST00000483002 CC2D2AQ9P2K1 1620 aa33.32■■■□□ 2.92
RAB11FIP3-209ENST00000483002 EIF4G1Q04637 1599 aaKnown RBP33.26■■■□□ 2.92
RAB11FIP3-209ENST00000483002 CECR2Q9BXF3 1484 aa33.25■■■□□ 2.91
RAB11FIP3-209ENST00000483002 NCAPD3P42695 1498 aa32.25■■■□□ 2.75
RAB11FIP3-209ENST00000483002 ATAD2BQ9ULI0 1458 aa32.17■■■□□ 2.74
RAB11FIP3-209ENST00000483002 SMARCA4P51532 1647 aa32.12■■■□□ 2.73
RAB11FIP3-209ENST00000483002 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
RAB11FIP3-209ENST00000483002 BAZ1AQ9NRL2 1556 aaPredicted RBP31.99■■■□□ 2.71
RAB11FIP3-209ENST00000483002 HMGXB3Q12766 1538 aa31.96■■■□□ 2.71
RAB11FIP3-209ENST00000483002 ERCC6Q03468 1493 aa31.89■■■□□ 2.7
RAB11FIP3-209ENST00000483002 BAZ1BQ9UIG0 1483 aaKnown RBP31.87■■■□□ 2.69
RAB11FIP3-209ENST00000483002 MROH2BQ7Z745 1585 aa31.8■■■□□ 2.68
RAB11FIP3-209ENST00000483002 PEG3Q9GZU2 1588 aa31.78■■■□□ 2.68
RAB11FIP3-209ENST00000483002 NESP48681 1621 aa31.75■■■□□ 2.67
RAB11FIP3-209ENST00000483002 CUX2O14529 1486 aa31.73■■■□□ 2.67
RAB11FIP3-209ENST00000483002 DNAJC5Q9H3Z4 198 aa31.72■■■□□ 2.67
RAB11FIP3-209ENST00000483002 LAMC3Q9Y6N6 1575 aa31.47■■■□□ 2.63
RAB11FIP3-209ENST00000483002 WIZO95785 1651 aa31.41■■■□□ 2.62
RAB11FIP3-209ENST00000483002 PDS5BQ9NTI5 1447 aa31.35■■■□□ 2.61
RAB11FIP3-209ENST00000483002 CADPSQ9ULU8 1353 aa31.31■■■□□ 2.6
RAB11FIP3-209ENST00000483002 THOC2Q8NI27 1593 aaKnown RBP31.31■■■□□ 2.6
RAB11FIP3-209ENST00000483002 KIF21AQ7Z4S6 1674 aa31.29■■■□□ 2.6
RAB11FIP3-209ENST00000483002 RSF1Q96T23 1441 aaPredicted RBP31.19■■■□□ 2.58
RAB11FIP3-209ENST00000483002 MRC2Q9UBG0 1479 aa31.05■■■□□ 2.56
RAB11FIP3-209ENST00000483002 TOP2AP11388 1531 aaKnown RBP30.98■■■□□ 2.55
RAB11FIP3-209ENST00000483002 CEP164Q9UPV0 1460 aa30.95■■■□□ 2.55
RAB11FIP3-209ENST00000483002 FANCD2Q9BXW9 1451 aa30.95■■■□□ 2.54
RAB11FIP3-209ENST00000483002 CFTRP13569 1480 aa30.94■■■□□ 2.54
RAB11FIP3-209ENST00000483002 WDR62O43379 1518 aa30.93■■■□□ 2.54
RAB11FIP3-209ENST00000483002 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.51
RAB11FIP3-209ENST00000483002 URB2Q14146 1524 aaKnown RBP30.67■■■□□ 2.5
RAB11FIP3-209ENST00000483002 PRDM2Q13029 1718 aa30.54■■■□□ 2.48
RAB11FIP3-209ENST00000483002 OSCARQ8IYS5 282 aa30.43■■■□□ 2.46
RAB11FIP3-209ENST00000483002 TRIM41Q8WV44 630 aa30.43■■■□□ 2.46
RAB11FIP3-209ENST00000483002 TOPBP1Q92547 1522 aa30.35■■■□□ 2.45
RAB11FIP3-209ENST00000483002 IFT140Q96RY7 1462 aa30.32■■■□□ 2.44
RAB11FIP3-209ENST00000483002 ZNF608Q9ULD9 1512 aaPredicted RBP30.3■■■□□ 2.44
RAB11FIP3-209ENST00000483002 ABCC8Q09428 1581 aa30.28■■■□□ 2.44
RAB11FIP3-209ENST00000483002 DNMBPQ6XZF7 1577 aa30.22■■■□□ 2.43
RAB11FIP3-209ENST00000483002 AQRO60306 1485 aaKnown RBP eCLIP30.07■■■□□ 2.41e-6■■□□□ 14.5
RAB11FIP3-209ENST00000483002 EIF4G3O43432 1585 aaKnown RBP30.07■■■□□ 2.4
RAB11FIP3-209ENST00000483002 POLA1P09884 1462 aaPredicted RBP30.05■■■□□ 2.4
RAB11FIP3-209ENST00000483002 TARBP1Q13395 1621 aaKnown RBP30.04■■■□□ 2.4
RAB11FIP3-209ENST00000483002 SUPT5HO00267 1087 aaKnown RBP30.02■■■□□ 2.4
RAB11FIP3-209ENST00000483002 RAD54L2Q9Y4B4 1467 aa29.98■■■□□ 2.39
RAB11FIP3-209ENST00000483002 SOGA1O94964 1423 aa29.96■■■□□ 2.39
RAB11FIP3-209ENST00000483002 FBLN2P98095 1184 aa29.94■■■□□ 2.38
RAB11FIP3-209ENST00000483002 TDRD9Q8NDG6 1382 aaKnown RBP29.92■■■□□ 2.38
RAB11FIP3-209ENST00000483002 RIMBP3CA6NJZ7 1639 aa29.91■■■□□ 2.38
RAB11FIP3-209ENST00000483002 RIMBP3BA6NNM3 1639 aa29.91■■■□□ 2.38
RAB11FIP3-209ENST00000483002 RIMBP3Q9UFD9 1639 aa29.91■■■□□ 2.38
RAB11FIP3-209ENST00000483002 FGD5Q6ZNL6 1462 aa29.88■■■□□ 2.37
RAB11FIP3-209ENST00000483002 CUX1P39880 1505 aa29.86■■■□□ 2.37
RAB11FIP3-209ENST00000483002 ARHGEF11O15085 1522 aa29.84■■■□□ 2.37
RAB11FIP3-209ENST00000483002 CHD1O14646 1710 aa29.84■■■□□ 2.37
RAB11FIP3-209ENST00000483002 CYB5RLQ6IPT4 315 aa29.75■■■□□ 2.35
RAB11FIP3-209ENST00000483002 SNAPC4Q5SXM2 1469 aa29.72■■■□□ 2.35
RAB11FIP3-209ENST00000483002 CHMP7Q8WUX9 453 aaPredicted RBP29.7■■■□□ 2.35
RAB11FIP3-209ENST00000483002 WDR97A6NE52 1622 aa29.68■■■□□ 2.34
RAB11FIP3-209ENST00000483002 GRIN2BQ13224 1484 aa29.65■■■□□ 2.34
RAB11FIP3-209ENST00000483002 MAGI1Q96QZ7 1491 aaPredicted RBP29.61■■■□□ 2.33
RAB11FIP3-209ENST00000483002 GAPVD1Q14C86 1478 aa29.57■■■□□ 2.32
RAB11FIP3-209ENST00000483002 ARAP1Q96P48 1450 aa29.55■■■□□ 2.32
RAB11FIP3-209ENST00000483002 SYNJ2O15056 1496 aa29.54■■■□□ 2.32
RAB11FIP3-209ENST00000483002 ABCA10Q8WWZ4 1543 aa29.52■■■□□ 2.32
RAB11FIP3-209ENST00000483002 SYNJ1O43426 1573 aa29.51■■■□□ 2.31
RAB11FIP3-209ENST00000483002 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
RAB11FIP3-209ENST00000483002 PBRM1Q86U86 1689 aa29.48■■■□□ 2.31
RAB11FIP3-209ENST00000483002 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
RAB11FIP3-209ENST00000483002 ABCA5Q8WWZ7 1642 aa29.43■■■□□ 2.3
RAB11FIP3-209ENST00000483002 TRHP20396 242 aaPredicted RBP29.4■■■□□ 2.3
RAB11FIP3-209ENST00000483002 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
RAB11FIP3-209ENST00000483002 BIVM-ERCC5R4GMW8 1640 aa29.35■■■□□ 2.29
RAB11FIP3-209ENST00000483002 GRIN2AQ12879 1464 aa29.26■■■□□ 2.27
RAB11FIP3-209ENST00000483002 ADAMTS12P58397 1594 aa29.21■■■□□ 2.27
RAB11FIP3-209ENST00000483002 FHAD1B1AJZ9 1412 aa29.2■■■□□ 2.26
RAB11FIP3-209ENST00000483002 NUP160Q12769 1436 aa29.15■■■□□ 2.26
RAB11FIP3-209ENST00000483002 ERICH3Q5RHP9 1530 aa29.15■■■□□ 2.26
RAB11FIP3-209ENST00000483002 CEP170Q5SW79 1584 aa29.13■■■□□ 2.25
RAB11FIP3-209ENST00000483002 ERCC6L2Q5T890 1561 aa29.09■■■□□ 2.25
RAB11FIP3-209ENST00000483002 SHROOM2Q13796 1616 aa28.97■■■□□ 2.23
RAB11FIP3-209ENST00000483002 JPH4Q96JJ6 628 aa28.96■■■□□ 2.23
RAB11FIP3-209ENST00000483002 PRG4Q92954 1404 aaPredicted RBP28.93■■■□□ 2.22
RAB11FIP3-209ENST00000483002 IGF1RP08069 1367 aa28.88■■■□□ 2.21
RAB11FIP3-209ENST00000483002 KIF27Q86VH2 1401 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms