RNA–Protein interactions for RNA: ENST00000482987.1

EPHB3-203, Transcript of EPH receptor B3, humanhuman

TSL 3

Gene EPHB3, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-203ENST00000482987 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.21
EPHB3-203ENST00000482987 ABCC9O60706 1549 aa25.88■■□□□ 1.73
EPHB3-203ENST00000482987 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
EPHB3-203ENST00000482987 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
EPHB3-203ENST00000482987 DNAJC5BQ9UF47 199 aa24.54■■□□□ 1.52
EPHB3-203ENST00000482987 NACADO15069 1562 aa24.44■■□□□ 1.5
EPHB3-203ENST00000482987 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
EPHB3-203ENST00000482987 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.45
EPHB3-203ENST00000482987 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.45
EPHB3-203ENST00000482987 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
EPHB3-203ENST00000482987 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
EPHB3-203ENST00000482987 BICRAQ9NZM4 1560 aa23.93■■□□□ 1.42
EPHB3-203ENST00000482987 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
EPHB3-203ENST00000482987 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
EPHB3-203ENST00000482987 SHROOM4Q9ULL8 1493 aa23.56■■□□□ 1.36
EPHB3-203ENST00000482987 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
EPHB3-203ENST00000482987 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
EPHB3-203ENST00000482987 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
EPHB3-203ENST00000482987 DNAJC5Q9H3Z4 198 aa22.67■■□□□ 1.22
EPHB3-203ENST00000482987 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
EPHB3-203ENST00000482987 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
EPHB3-203ENST00000482987 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
EPHB3-203ENST00000482987 SMARCA2P51531 1590 aa22.44■■□□□ 1.18
EPHB3-203ENST00000482987 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
EPHB3-203ENST00000482987 BAZ1AQ9NRL2 1556 aaPredicted RBP22.39■■□□□ 1.18
EPHB3-203ENST00000482987 ERCC6Q03468 1493 aa22.3■■□□□ 1.16
EPHB3-203ENST00000482987 BAZ1BQ9UIG0 1483 aaKnown RBP22.3■■□□□ 1.16
EPHB3-203ENST00000482987 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
EPHB3-203ENST00000482987 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
EPHB3-203ENST00000482987 NESP48681 1621 aa22.26■■□□□ 1.15
EPHB3-203ENST00000482987 CUX2O14529 1486 aa22.26■■□□□ 1.15
EPHB3-203ENST00000482987 LAMC3Q9Y6N6 1575 aa22.04■■□□□ 1.12
EPHB3-203ENST00000482987 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
EPHB3-203ENST00000482987 WIZO95785 1651 aa21.97■■□□□ 1.11
EPHB3-203ENST00000482987 PDS5BQ9NTI5 1447 aa21.93■■□□□ 1.1
EPHB3-203ENST00000482987 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
EPHB3-203ENST00000482987 KIF21AQ7Z4S6 1674 aa21.88■■□□□ 1.09
EPHB3-203ENST00000482987 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
EPHB3-203ENST00000482987 MRC2Q9UBG0 1479 aa21.76■■□□□ 1.07
EPHB3-203ENST00000482987 WDR62O43379 1518 aa21.7■■□□□ 1.07
EPHB3-203ENST00000482987 TOP2AP11388 1531 aaKnown RBP21.7■■□□□ 1.07
EPHB3-203ENST00000482987 CFTRP13569 1480 aa21.69■■□□□ 1.06
EPHB3-203ENST00000482987 FANCD2Q9BXW9 1451 aa21.67■■□□□ 1.06
EPHB3-203ENST00000482987 CEP164Q9UPV0 1460 aa21.67■■□□□ 1.06
EPHB3-203ENST00000482987 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
EPHB3-203ENST00000482987 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
EPHB3-203ENST00000482987 TRIM41Q8WV44 630 aa21.33■■□□□ 1.01
EPHB3-203ENST00000482987 PRDM2Q13029 1718 aa21.32■■□□□ 1
EPHB3-203ENST00000482987 TOPBP1Q92547 1522 aa21.26■□□□□ 0.99
EPHB3-203ENST00000482987 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
EPHB3-203ENST00000482987 ZNF608Q9ULD9 1512 aaPredicted RBP21.24■□□□□ 0.99
EPHB3-203ENST00000482987 IFT140Q96RY7 1462 aa21.24■□□□□ 0.99
EPHB3-203ENST00000482987 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
EPHB3-203ENST00000482987 DNMBPQ6XZF7 1577 aa21.15■□□□□ 0.98
EPHB3-203ENST00000482987 EIF4G3O43432 1585 aaKnown RBP21.07■□□□□ 0.96
EPHB3-203ENST00000482987 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
EPHB3-203ENST00000482987 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
EPHB3-203ENST00000482987 AQRO60306 1485 aaKnown RBP eCLIP21.05■□□□□ 0.96
EPHB3-203ENST00000482987 RAD54L2Q9Y4B4 1467 aa21■□□□□ 0.95
EPHB3-203ENST00000482987 RIMBP3CA6NJZ7 1639 aa20.96■□□□□ 0.95
EPHB3-203ENST00000482987 RIMBP3BA6NNM3 1639 aa20.96■□□□□ 0.95
EPHB3-203ENST00000482987 RIMBP3Q9UFD9 1639 aa20.96■□□□□ 0.95
EPHB3-203ENST00000482987 SOGA1O94964 1423 aa20.95■□□□□ 0.94
EPHB3-203ENST00000482987 TDRD9Q8NDG6 1382 aaKnown RBP20.93■□□□□ 0.94
EPHB3-203ENST00000482987 ARHGEF11O15085 1522 aa20.93■□□□□ 0.94
EPHB3-203ENST00000482987 CUX1P39880 1505 aa20.93■□□□□ 0.94
EPHB3-203ENST00000482987 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
EPHB3-203ENST00000482987 SUPT5HO00267 1087 aaKnown RBP20.88■□□□□ 0.93
EPHB3-203ENST00000482987 FBLN2P98095 1184 aa20.86■□□□□ 0.93
EPHB3-203ENST00000482987 CHD1O14646 1710 aa20.86■□□□□ 0.93
EPHB3-203ENST00000482987 SNAPC4Q5SXM2 1469 aa20.82■□□□□ 0.92
EPHB3-203ENST00000482987 WDR97A6NE52 1622 aa20.79■□□□□ 0.92
EPHB3-203ENST00000482987 CYB5RLQ6IPT4 315 aa20.77■□□□□ 0.92
EPHB3-203ENST00000482987 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
EPHB3-203ENST00000482987 ARAP1Q96P48 1450 aa20.75■□□□□ 0.91
EPHB3-203ENST00000482987 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
EPHB3-203ENST00000482987 CHMP7Q8WUX9 453 aaPredicted RBP20.72■□□□□ 0.91
EPHB3-203ENST00000482987 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
EPHB3-203ENST00000482987 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
EPHB3-203ENST00000482987 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
EPHB3-203ENST00000482987 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
EPHB3-203ENST00000482987 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.89
EPHB3-203ENST00000482987 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
EPHB3-203ENST00000482987 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
EPHB3-203ENST00000482987 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
EPHB3-203ENST00000482987 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
EPHB3-203ENST00000482987 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
EPHB3-203ENST00000482987 TRHP20396 242 aaPredicted RBP20.5■□□□□ 0.87
EPHB3-203ENST00000482987 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
EPHB3-203ENST00000482987 ADAMTS12P58397 1594 aa20.48■□□□□ 0.87
EPHB3-203ENST00000482987 NUP160Q12769 1436 aa20.45■□□□□ 0.86
EPHB3-203ENST00000482987 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
EPHB3-203ENST00000482987 CEP170Q5SW79 1584 aa20.42■□□□□ 0.86
EPHB3-203ENST00000482987 ERCC6L2Q5T890 1561 aa20.41■□□□□ 0.86
EPHB3-203ENST00000482987 ERICH3Q5RHP9 1530 aa20.4■□□□□ 0.86
EPHB3-203ENST00000482987 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
EPHB3-203ENST00000482987 PRG4Q92954 1404 aaPredicted RBP20.23■□□□□ 0.83
EPHB3-203ENST00000482987 JPH4Q96JJ6 628 aa20.22■□□□□ 0.83
EPHB3-203ENST00000482987 IGF1RP08069 1367 aa20.21■□□□□ 0.83
EPHB3-203ENST00000482987 RUSC2Q8N2Y8 1516 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms