RNA–Protein interactions for RNA: ENST00000482976.1

NCBP2-213, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 2

Gene NCBP2, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-213ENST00000482976 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
NCBP2-213ENST00000482976 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
NCBP2-213ENST00000482976 ABCC9O60706 1549 aa28.08■■■□□ 2.08
NCBP2-213ENST00000482976 AEBP2Q6ZN18 517 aaPredicted RBP27.98■■■□□ 2.07
NCBP2-213ENST00000482976 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
NCBP2-213ENST00000482976 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
NCBP2-213ENST00000482976 NACADO15069 1562 aa26.76■■□□□ 1.87
NCBP2-213ENST00000482976 ZCCHC6Q5VYS8 1495 aaKnown RBP26.61■■□□□ 1.85
NCBP2-213ENST00000482976 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
NCBP2-213ENST00000482976 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
NCBP2-213ENST00000482976 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
NCBP2-213ENST00000482976 PABPN1Q86U42 306 aaKnown RBP eCLIP26.28■■□□□ 1.8
NCBP2-213ENST00000482976 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
NCBP2-213ENST00000482976 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
NCBP2-213ENST00000482976 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
NCBP2-213ENST00000482976 DNAJC5BQ9UF47 199 aa25.94■■□□□ 1.74
NCBP2-213ENST00000482976 SHROOM4Q9ULL8 1493 aa25.62■■□□□ 1.69
NCBP2-213ENST00000482976 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.66
NCBP2-213ENST00000482976 CC2D2AQ9P2K1 1620 aa25.35■■□□□ 1.65
NCBP2-213ENST00000482976 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
NCBP2-213ENST00000482976 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
NCBP2-213ENST00000482976 BAZ1AQ9NRL2 1556 aaPredicted RBP24.78■■□□□ 1.56
NCBP2-213ENST00000482976 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
NCBP2-213ENST00000482976 NCAPD3P42695 1498 aa24.72■■□□□ 1.55
NCBP2-213ENST00000482976 MROH2BQ7Z745 1585 aa24.71■■□□□ 1.55
NCBP2-213ENST00000482976 SMARCA2P51531 1590 aa24.67■■□□□ 1.54
NCBP2-213ENST00000482976 HMGXB3Q12766 1538 aa24.56■■□□□ 1.52
NCBP2-213ENST00000482976 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
NCBP2-213ENST00000482976 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
NCBP2-213ENST00000482976 WIZO95785 1651 aa24.47■■□□□ 1.51
NCBP2-213ENST00000482976 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
NCBP2-213ENST00000482976 NESP48681 1621 aa24.28■■□□□ 1.48
NCBP2-213ENST00000482976 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
NCBP2-213ENST00000482976 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
NCBP2-213ENST00000482976 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.44
NCBP2-213ENST00000482976 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
NCBP2-213ENST00000482976 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.43
NCBP2-213ENST00000482976 SENP3Q9H4L4 574 aaPredicted RBP23.95■■□□□ 1.42
NCBP2-213ENST00000482976 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
NCBP2-213ENST00000482976 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.42
NCBP2-213ENST00000482976 CUX2O14529 1486 aa23.86■■□□□ 1.41
NCBP2-213ENST00000482976 THOC2Q8NI27 1593 aaKnown RBP23.84■■□□□ 1.41
NCBP2-213ENST00000482976 CFTRP13569 1480 aa23.84■■□□□ 1.41
NCBP2-213ENST00000482976 SUPT5HO00267 1087 aaKnown RBP23.81■■□□□ 1.4
NCBP2-213ENST00000482976 FANCD2Q9BXW9 1451 aa23.76■■□□□ 1.39
NCBP2-213ENST00000482976 CEP164Q9UPV0 1460 aa23.72■■□□□ 1.39
NCBP2-213ENST00000482976 MRC2Q9UBG0 1479 aa23.7■■□□□ 1.38
NCBP2-213ENST00000482976 PRDM2Q13029 1718 aa23.64■■□□□ 1.38
NCBP2-213ENST00000482976 WDR62O43379 1518 aa23.62■■□□□ 1.37
NCBP2-213ENST00000482976 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
NCBP2-213ENST00000482976 PHF23Q9BUL5 403 aaPredicted RBP23.52■■□□□ 1.36
NCBP2-213ENST00000482976 TOPBP1Q92547 1522 aa23.37■■□□□ 1.33
NCBP2-213ENST00000482976 DNAJC5Q9H3Z4 198 aa23.35■■□□□ 1.33
NCBP2-213ENST00000482976 DNMBPQ6XZF7 1577 aa23.31■■□□□ 1.32
NCBP2-213ENST00000482976 ABCC8Q09428 1581 aa23.28■■□□□ 1.32
NCBP2-213ENST00000482976 IFT140Q96RY7 1462 aa23.21■■□□□ 1.31
NCBP2-213ENST00000482976 ZNF608Q9ULD9 1512 aaPredicted RBP23.21■■□□□ 1.31
NCBP2-213ENST00000482976 CUX1P39880 1505 aa23.18■■□□□ 1.3
NCBP2-213ENST00000482976 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
NCBP2-213ENST00000482976 RAD54L2Q9Y4B4 1467 aa23.13■■□□□ 1.29
NCBP2-213ENST00000482976 TARBP1Q13395 1621 aaKnown RBP23.12■■□□□ 1.29
NCBP2-213ENST00000482976 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
NCBP2-213ENST00000482976 SOGA1O94964 1423 aa23.09■■□□□ 1.29
NCBP2-213ENST00000482976 AQRO60306 1485 aaKnown RBP eCLIP23.07■■□□□ 1.28
NCBP2-213ENST00000482976 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
NCBP2-213ENST00000482976 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
NCBP2-213ENST00000482976 WRNQ14191 1432 aaPredicted RBP eCLIP22.97■■□□□ 1.27
NCBP2-213ENST00000482976 SYNJ1O43426 1573 aa22.95■■□□□ 1.26
NCBP2-213ENST00000482976 OSCARQ8IYS5 282 aa22.94■■□□□ 1.26
NCBP2-213ENST00000482976 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
NCBP2-213ENST00000482976 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
NCBP2-213ENST00000482976 WDR97A6NE52 1622 aa22.89■■□□□ 1.25
NCBP2-213ENST00000482976 FBLN2P98095 1184 aa22.86■■□□□ 1.25
NCBP2-213ENST00000482976 ABCA10Q8WWZ4 1543 aa22.83■■□□□ 1.25
NCBP2-213ENST00000482976 CHD1O14646 1710 aa22.83■■□□□ 1.25
NCBP2-213ENST00000482976 SNAPC4Q5SXM2 1469 aa22.81■■□□□ 1.24
NCBP2-213ENST00000482976 GAPVD1Q14C86 1478 aa22.8■■□□□ 1.24
NCBP2-213ENST00000482976 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
NCBP2-213ENST00000482976 PBRM1Q86U86 1689 aa22.77■■□□□ 1.24
NCBP2-213ENST00000482976 ABCA5Q8WWZ7 1642 aa22.76■■□□□ 1.23
NCBP2-213ENST00000482976 CHMP7Q8WUX9 453 aaPredicted RBP22.72■■□□□ 1.23
NCBP2-213ENST00000482976 MAGI1Q96QZ7 1491 aaPredicted RBP22.71■■□□□ 1.23
NCBP2-213ENST00000482976 SYNJ2O15056 1496 aa22.65■■□□□ 1.22
NCBP2-213ENST00000482976 TRIM41Q8WV44 630 aa22.64■■□□□ 1.21
NCBP2-213ENST00000482976 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
NCBP2-213ENST00000482976 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
NCBP2-213ENST00000482976 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
NCBP2-213ENST00000482976 ARHGEF11O15085 1522 aa22.56■■□□□ 1.2
NCBP2-213ENST00000482976 ADAMTS12P58397 1594 aa22.55■■□□□ 1.2
NCBP2-213ENST00000482976 ERICH3Q5RHP9 1530 aa22.54■■□□□ 1.2
NCBP2-213ENST00000482976 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.19
NCBP2-213ENST00000482976 GRIN2AQ12879 1464 aa22.51■■□□□ 1.19
NCBP2-213ENST00000482976 FHAD1B1AJZ9 1412 aa22.5■■□□□ 1.19
NCBP2-213ENST00000482976 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
NCBP2-213ENST00000482976 IGF1RP08069 1367 aa22.44■■□□□ 1.18
NCBP2-213ENST00000482976 CYB5RLQ6IPT4 315 aa22.44■■□□□ 1.18
NCBP2-213ENST00000482976 CEP170Q5SW79 1584 aa22.43■■□□□ 1.18
NCBP2-213ENST00000482976 FOXD1Q16676 465 aa22.41■■□□□ 1.18
NCBP2-213ENST00000482976 NUP160Q12769 1436 aa22.39■■□□□ 1.17
NCBP2-213ENST00000482976 RUSC2Q8N2Y8 1516 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms