RNA–Protein interactions for RNA: ENST00000482960.1

NDUFA3-212, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 5

Gene NDUFA3, Length 266 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-212ENST00000482960 NISCHQ9Y2I1 1504 aa19.96■□□□□ 0.79
NDUFA3-212ENST00000482960 ABCC9O60706 1549 aa17.69■□□□□ 0.42
NDUFA3-212ENST00000482960 CCDC180Q9P1Z9 1646 aa17.69■□□□□ 0.42
NDUFA3-212ENST00000482960 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
NDUFA3-212ENST00000482960 RB1CC1Q8TDY2 1594 aa16.8■□□□□ 0.28
NDUFA3-212ENST00000482960 NACADO15069 1562 aa16.75■□□□□ 0.27
NDUFA3-212ENST00000482960 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
NDUFA3-212ENST00000482960 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
NDUFA3-212ENST00000482960 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
NDUFA3-212ENST00000482960 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
NDUFA3-212ENST00000482960 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
NDUFA3-212ENST00000482960 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
NDUFA3-212ENST00000482960 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
NDUFA3-212ENST00000482960 SCRIBQ14160 1630 aa16.21■□□□□ 0.19
NDUFA3-212ENST00000482960 SHROOM4Q9ULL8 1493 aa16.08■□□□□ 0.16
NDUFA3-212ENST00000482960 EIF4G1Q04637 1599 aaKnown RBP15.96■□□□□ 0.14
NDUFA3-212ENST00000482960 CC2D2AQ9P2K1 1620 aa15.94■□□□□ 0.14
NDUFA3-212ENST00000482960 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
NDUFA3-212ENST00000482960 NCAPD3P42695 1498 aa15.55■□□□□ 0.08
NDUFA3-212ENST00000482960 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.08
NDUFA3-212ENST00000482960 SMARCA4P51532 1647 aa15.48■□□□□ 0.07
NDUFA3-212ENST00000482960 MROH2BQ7Z745 1585 aa15.42■□□□□ 0.06
NDUFA3-212ENST00000482960 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
NDUFA3-212ENST00000482960 SMARCA2P51531 1590 aa15.38■□□□□ 0.05
NDUFA3-212ENST00000482960 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
NDUFA3-212ENST00000482960 PEG3Q9GZU2 1588 aa15.35■□□□□ 0.05
NDUFA3-212ENST00000482960 BAZ1BQ9UIG0 1483 aaKnown RBP15.32■□□□□ 0.04
NDUFA3-212ENST00000482960 NESP48681 1621 aa15.28■□□□□ 0.04
NDUFA3-212ENST00000482960 WIZO95785 1651 aa15.19■□□□□ 0.02
NDUFA3-212ENST00000482960 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
NDUFA3-212ENST00000482960 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
NDUFA3-212ENST00000482960 CUX2O14529 1486 aa15.09■□□□□ 0.01
NDUFA3-212ENST00000482960 CADPSQ9ULU8 1353 aa15.09■□□□□ 0.01
NDUFA3-212ENST00000482960 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
NDUFA3-212ENST00000482960 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
NDUFA3-212ENST00000482960 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
NDUFA3-212ENST00000482960 THOC2Q8NI27 1593 aaKnown RBP14.99□□□□□ -0.01
NDUFA3-212ENST00000482960 TOP2AP11388 1531 aaKnown RBP14.97□□□□□ -0.01
NDUFA3-212ENST00000482960 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
NDUFA3-212ENST00000482960 CFTRP13569 1480 aa14.95□□□□□ -0.02
NDUFA3-212ENST00000482960 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
NDUFA3-212ENST00000482960 FANCD2Q9BXW9 1451 aa14.88□□□□□ -0.03
NDUFA3-212ENST00000482960 MRC2Q9UBG0 1479 aa14.88□□□□□ -0.03
NDUFA3-212ENST00000482960 CEP164Q9UPV0 1460 aa14.83□□□□□ -0.03
NDUFA3-212ENST00000482960 WDR62O43379 1518 aa14.83□□□□□ -0.04
NDUFA3-212ENST00000482960 URB2Q14146 1524 aaKnown RBP14.78□□□□□ -0.04
NDUFA3-212ENST00000482960 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
NDUFA3-212ENST00000482960 TOPBP1Q92547 1522 aa14.61□□□□□ -0.07
NDUFA3-212ENST00000482960 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
NDUFA3-212ENST00000482960 ZNF608Q9ULD9 1512 aaPredicted RBP14.6□□□□□ -0.07
NDUFA3-212ENST00000482960 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
NDUFA3-212ENST00000482960 ABCC8Q09428 1581 aa14.53□□□□□ -0.08
NDUFA3-212ENST00000482960 DNMBPQ6XZF7 1577 aa14.53□□□□□ -0.08
NDUFA3-212ENST00000482960 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
NDUFA3-212ENST00000482960 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
NDUFA3-212ENST00000482960 AQRO60306 1485 aaKnown RBP eCLIP14.49□□□□□ -0.09
NDUFA3-212ENST00000482960 RAD54L2Q9Y4B4 1467 aa14.48□□□□□ -0.09
NDUFA3-212ENST00000482960 TARBP1Q13395 1621 aaKnown RBP14.47□□□□□ -0.09
NDUFA3-212ENST00000482960 CUX1P39880 1505 aa14.46□□□□□ -0.1
NDUFA3-212ENST00000482960 SOGA1O94964 1423 aa14.44□□□□□ -0.1
NDUFA3-212ENST00000482960 TDRD9Q8NDG6 1382 aaKnown RBP14.44□□□□□ -0.1
NDUFA3-212ENST00000482960 FGD5Q6ZNL6 1462 aa14.42□□□□□ -0.1
NDUFA3-212ENST00000482960 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
NDUFA3-212ENST00000482960 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
NDUFA3-212ENST00000482960 FBLN2P98095 1184 aa14.32□□□□□ -0.12
NDUFA3-212ENST00000482960 SNAPC4Q5SXM2 1469 aa14.28□□□□□ -0.12
NDUFA3-212ENST00000482960 WRNQ14191 1432 aaPredicted RBP eCLIP14.25□□□□□ -0.13
NDUFA3-212ENST00000482960 ARHGEF11O15085 1522 aa14.25□□□□□ -0.13
NDUFA3-212ENST00000482960 ABCA10Q8WWZ4 1543 aa14.25□□□□□ -0.13
NDUFA3-212ENST00000482960 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
NDUFA3-212ENST00000482960 CHD1O14646 1710 aa14.24□□□□□ -0.13
NDUFA3-212ENST00000482960 RIMBP3CA6NJZ7 1639 aa14.24□□□□□ -0.13
NDUFA3-212ENST00000482960 RIMBP3BA6NNM3 1639 aa14.24□□□□□ -0.13
NDUFA3-212ENST00000482960 RIMBP3Q9UFD9 1639 aa14.24□□□□□ -0.13
NDUFA3-212ENST00000482960 SYNJ1O43426 1573 aa14.24□□□□□ -0.13
NDUFA3-212ENST00000482960 GAPVD1Q14C86 1478 aa14.24□□□□□ -0.13
NDUFA3-212ENST00000482960 WDR97A6NE52 1622 aa14.23□□□□□ -0.13
NDUFA3-212ENST00000482960 CHMP7Q8WUX9 453 aaPredicted RBP14.23□□□□□ -0.13
NDUFA3-212ENST00000482960 MAGI1Q96QZ7 1491 aaPredicted RBP14.21□□□□□ -0.13
NDUFA3-212ENST00000482960 TOP2BQ02880 1626 aa14.21□□□□□ -0.13
NDUFA3-212ENST00000482960 CYB5RLQ6IPT4 315 aa14.2□□□□□ -0.14
NDUFA3-212ENST00000482960 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
NDUFA3-212ENST00000482960 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
NDUFA3-212ENST00000482960 BIVM-ERCC5R4GMW8 1640 aa14.18□□□□□ -0.14
NDUFA3-212ENST00000482960 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
NDUFA3-212ENST00000482960 ARAP1Q96P48 1450 aa14.14□□□□□ -0.15
NDUFA3-212ENST00000482960 PBRM1Q86U86 1689 aa14.12□□□□□ -0.15
NDUFA3-212ENST00000482960 GRIN2AQ12879 1464 aa14.08□□□□□ -0.16
NDUFA3-212ENST00000482960 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
NDUFA3-212ENST00000482960 NUP160Q12769 1436 aa14.06□□□□□ -0.16
NDUFA3-212ENST00000482960 ADAMTS12P58397 1594 aa14.05□□□□□ -0.16
NDUFA3-212ENST00000482960 ERICH3Q5RHP9 1530 aa14.04□□□□□ -0.16
NDUFA3-212ENST00000482960 IGF1RP08069 1367 aa14.03□□□□□ -0.16
NDUFA3-212ENST00000482960 CEP170Q5SW79 1584 aa14.03□□□□□ -0.16
NDUFA3-212ENST00000482960 ERCC6L2Q5T890 1561 aa14.01□□□□□ -0.17
NDUFA3-212ENST00000482960 JPH4Q96JJ6 628 aa13.95□□□□□ -0.18
NDUFA3-212ENST00000482960 KIF27Q86VH2 1401 aa13.95□□□□□ -0.18
NDUFA3-212ENST00000482960 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
NDUFA3-212ENST00000482960 SHROOM2Q13796 1616 aa13.92□□□□□ -0.18
NDUFA3-212ENST00000482960 PRG4Q92954 1404 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms