RNA–Protein interactions for RNA: ENST00000482957.1

KCNQ2-208, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5

Gene KCNQ2, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-208ENST00000482957 NISCHQ9Y2I1 1504 aa39.92■■■■□ 3.98
KCNQ2-208ENST00000482957 CCDC180Q9P1Z9 1646 aa35.78■■■■□ 3.32
KCNQ2-208ENST00000482957 ABCC9O60706 1549 aa35.66■■■■□ 3.3
KCNQ2-208ENST00000482957 RB1CC1Q8TDY2 1594 aa33.98■■■■□ 3.03
KCNQ2-208ENST00000482957 NACADO15069 1562 aa33.78■■■■□ 3
KCNQ2-208ENST00000482957 DCAF8L2P0C7V8 631 aa33.63■■■□□ 2.97
KCNQ2-208ENST00000482957 MYO15BQ96JP2 1530 aa33.34■■■□□ 2.93
KCNQ2-208ENST00000482957 DNAJC5BQ9UF47 199 aa33.33■■■□□ 2.93
KCNQ2-208ENST00000482957 UNC13AQ9UPW8 1703 aa33.26■■■□□ 2.92
KCNQ2-208ENST00000482957 PABPN1Q86U42 306 aaKnown RBP eCLIP33.21■■■□□ 2.91
KCNQ2-208ENST00000482957 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
KCNQ2-208ENST00000482957 BICRAQ9NZM4 1560 aa33■■■□□ 2.87
KCNQ2-208ENST00000482957 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
KCNQ2-208ENST00000482957 SCRIBQ14160 1630 aa32.62■■■□□ 2.81
KCNQ2-208ENST00000482957 SHROOM4Q9ULL8 1493 aa32.54■■■□□ 2.8
KCNQ2-208ENST00000482957 CC2D2AQ9P2K1 1620 aa32.22■■■□□ 2.75
KCNQ2-208ENST00000482957 EIF4G1Q04637 1599 aaKnown RBP32.18■■■□□ 2.74
KCNQ2-208ENST00000482957 CECR2Q9BXF3 1484 aa32.1■■■□□ 2.73
KCNQ2-208ENST00000482957 NCAPD3P42695 1498 aa31.18■■■□□ 2.58
KCNQ2-208ENST00000482957 SMARCA4P51532 1647 aa31.13■■■□□ 2.57
KCNQ2-208ENST00000482957 ATAD2BQ9ULI0 1458 aa31.11■■■□□ 2.57
KCNQ2-208ENST00000482957 SMARCA2P51531 1590 aa31.03■■■□□ 2.56
KCNQ2-208ENST00000482957 BAZ1AQ9NRL2 1556 aaPredicted RBP30.97■■■□□ 2.55
KCNQ2-208ENST00000482957 HMGXB3Q12766 1538 aa30.97■■■□□ 2.55
KCNQ2-208ENST00000482957 BAZ1BQ9UIG0 1483 aaKnown RBP30.82■■■□□ 2.52
KCNQ2-208ENST00000482957 PEG3Q9GZU2 1588 aa30.81■■■□□ 2.52
KCNQ2-208ENST00000482957 MROH2BQ7Z745 1585 aa30.77■■■□□ 2.52
KCNQ2-208ENST00000482957 ERCC6Q03468 1493 aa30.76■■■□□ 2.52
KCNQ2-208ENST00000482957 NESP48681 1621 aa30.67■■■□□ 2.5
KCNQ2-208ENST00000482957 CUX2O14529 1486 aa30.66■■■□□ 2.5
KCNQ2-208ENST00000482957 DNAJC5Q9H3Z4 198 aa30.49■■■□□ 2.47
KCNQ2-208ENST00000482957 LAMC3Q9Y6N6 1575 aa30.46■■■□□ 2.47
KCNQ2-208ENST00000482957 WIZO95785 1651 aa30.42■■■□□ 2.46
KCNQ2-208ENST00000482957 THOC2Q8NI27 1593 aaKnown RBP30.34■■■□□ 2.45
KCNQ2-208ENST00000482957 KIF21AQ7Z4S6 1674 aa30.29■■■□□ 2.44
KCNQ2-208ENST00000482957 PDS5BQ9NTI5 1447 aa30.27■■■□□ 2.44
KCNQ2-208ENST00000482957 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
KCNQ2-208ENST00000482957 RSF1Q96T23 1441 aaPredicted RBP30.17■■■□□ 2.42
KCNQ2-208ENST00000482957 TOP2AP11388 1531 aaKnown RBP30.03■■■□□ 2.4
KCNQ2-208ENST00000482957 MRC2Q9UBG0 1479 aa30.01■■■□□ 2.4
KCNQ2-208ENST00000482957 WDR62O43379 1518 aa29.95■■■□□ 2.38
KCNQ2-208ENST00000482957 CFTRP13569 1480 aa29.93■■■□□ 2.38
KCNQ2-208ENST00000482957 CEP164Q9UPV0 1460 aa29.93■■■□□ 2.38
KCNQ2-208ENST00000482957 FANCD2Q9BXW9 1451 aa29.91■■■□□ 2.38
KCNQ2-208ENST00000482957 CCDC88BA6NC98 1476 aa29.68■■■□□ 2.34
KCNQ2-208ENST00000482957 PRDM2Q13029 1718 aa29.67■■■□□ 2.34
KCNQ2-208ENST00000482957 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
KCNQ2-208ENST00000482957 TOPBP1Q92547 1522 aa29.35■■■□□ 2.29
KCNQ2-208ENST00000482957 IFT140Q96RY7 1462 aa29.31■■■□□ 2.28
KCNQ2-208ENST00000482957 ABCC8Q09428 1581 aa29.28■■■□□ 2.28
KCNQ2-208ENST00000482957 ZNF608Q9ULD9 1512 aaPredicted RBP29.28■■■□□ 2.28
KCNQ2-208ENST00000482957 OSCARQ8IYS5 282 aa29.27■■■□□ 2.28
KCNQ2-208ENST00000482957 DNMBPQ6XZF7 1577 aa29.26■■■□□ 2.28
KCNQ2-208ENST00000482957 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
KCNQ2-208ENST00000482957 EIF4G3O43432 1585 aaKnown RBP29.13■■■□□ 2.25
KCNQ2-208ENST00000482957 TARBP1Q13395 1621 aaKnown RBP29.1■■■□□ 2.25
KCNQ2-208ENST00000482957 POLA1P09884 1462 aaPredicted RBP29.07■■■□□ 2.24
KCNQ2-208ENST00000482957 AQRO60306 1485 aaKnown RBP eCLIP29.02■■■□□ 2.24
KCNQ2-208ENST00000482957 RAD54L2Q9Y4B4 1467 aa28.96■■■□□ 2.23
KCNQ2-208ENST00000482957 SUPT5HO00267 1087 aaKnown RBP28.93■■■□□ 2.22
KCNQ2-208ENST00000482957 SOGA1O94964 1423 aa28.93■■■□□ 2.22
KCNQ2-208ENST00000482957 RIMBP3CA6NJZ7 1639 aa28.91■■■□□ 2.22
KCNQ2-208ENST00000482957 RIMBP3BA6NNM3 1639 aa28.91■■■□□ 2.22
KCNQ2-208ENST00000482957 RIMBP3Q9UFD9 1639 aa28.91■■■□□ 2.22
KCNQ2-208ENST00000482957 FGD5Q6ZNL6 1462 aa28.91■■■□□ 2.22
KCNQ2-208ENST00000482957 CUX1P39880 1505 aa28.9■■■□□ 2.22
KCNQ2-208ENST00000482957 CHD1O14646 1710 aa28.9■■■□□ 2.22
KCNQ2-208ENST00000482957 TDRD9Q8NDG6 1382 aaKnown RBP28.86■■■□□ 2.21
KCNQ2-208ENST00000482957 ARHGEF11O15085 1522 aa28.83■■■□□ 2.21
KCNQ2-208ENST00000482957 FBLN2P98095 1184 aa28.8■■■□□ 2.2
KCNQ2-208ENST00000482957 WDR97A6NE52 1622 aa28.79■■■□□ 2.2
KCNQ2-208ENST00000482957 SNAPC4Q5SXM2 1469 aa28.73■■■□□ 2.19
KCNQ2-208ENST00000482957 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
KCNQ2-208ENST00000482957 MAGI1Q96QZ7 1491 aaPredicted RBP28.65■■■□□ 2.18
KCNQ2-208ENST00000482957 CYB5RLQ6IPT4 315 aa28.6■■■□□ 2.17
KCNQ2-208ENST00000482957 CHMP7Q8WUX9 453 aaPredicted RBP28.59■■■□□ 2.17
KCNQ2-208ENST00000482957 PBRM1Q86U86 1689 aa28.58■■■□□ 2.17
KCNQ2-208ENST00000482957 GAPVD1Q14C86 1478 aa28.58■■■□□ 2.17
KCNQ2-208ENST00000482957 ABCA10Q8WWZ4 1543 aa28.58■■■□□ 2.17
KCNQ2-208ENST00000482957 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
KCNQ2-208ENST00000482957 CLASP1Q7Z460 1538 aa28.55■■■□□ 2.16
KCNQ2-208ENST00000482957 ARAP1Q96P48 1450 aa28.55■■■□□ 2.16
KCNQ2-208ENST00000482957 ABCA5Q8WWZ7 1642 aa28.54■■■□□ 2.16
KCNQ2-208ENST00000482957 SYNJ1O43426 1573 aa28.54■■■□□ 2.16
KCNQ2-208ENST00000482957 BIVM-ERCC5R4GMW8 1640 aa28.48■■■□□ 2.15
KCNQ2-208ENST00000482957 WRNQ14191 1432 aaPredicted RBP eCLIP28.48■■■□□ 2.15
KCNQ2-208ENST00000482957 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
KCNQ2-208ENST00000482957 ADAMTS12P58397 1594 aa28.32■■■□□ 2.12
KCNQ2-208ENST00000482957 GRIN2AQ12879 1464 aa28.3■■■□□ 2.12
KCNQ2-208ENST00000482957 FHAD1B1AJZ9 1412 aa28.22■■■□□ 2.11
KCNQ2-208ENST00000482957 TRHP20396 242 aaPredicted RBP28.22■■■□□ 2.11
KCNQ2-208ENST00000482957 ERICH3Q5RHP9 1530 aa28.22■■■□□ 2.11
KCNQ2-208ENST00000482957 CEP170Q5SW79 1584 aa28.21■■■□□ 2.11
KCNQ2-208ENST00000482957 NUP160Q12769 1436 aa28.19■■■□□ 2.1
KCNQ2-208ENST00000482957 ERCC6L2Q5T890 1561 aa28.13■■■□□ 2.09
KCNQ2-208ENST00000482957 SHROOM2Q13796 1616 aa28.07■■■□□ 2.08
KCNQ2-208ENST00000482957 RUSC2Q8N2Y8 1516 aa27.92■■■□□ 2.06
KCNQ2-208ENST00000482957 KIF27Q86VH2 1401 aa27.91■■■□□ 2.06
KCNQ2-208ENST00000482957 PRG4Q92954 1404 aaPredicted RBP27.91■■■□□ 2.06
KCNQ2-208ENST00000482957 JPH4Q96JJ6 628 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms