RNA–Protein interactions for RNA: ENST00000482949.5

LCK-212, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 5

Gene LCK, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-212ENST00000482949 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
LCK-212ENST00000482949 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
LCK-212ENST00000482949 ABCC9O60706 1549 aa32.87■■■□□ 2.85
LCK-212ENST00000482949 RB1CC1Q8TDY2 1594 aa31.35■■■□□ 2.61
LCK-212ENST00000482949 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
LCK-212ENST00000482949 NACADO15069 1562 aa31.22■■■□□ 2.59
LCK-212ENST00000482949 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
LCK-212ENST00000482949 DNAJC5BQ9UF47 199 aa30.73■■■□□ 2.51
LCK-212ENST00000482949 PABPN1Q86U42 306 aaKnown RBP eCLIP30.72■■■□□ 2.51
LCK-212ENST00000482949 ZCCHC6Q5VYS8 1495 aaKnown RBP30.68■■■□□ 2.5
LCK-212ENST00000482949 DCAF1Q9Y4B6 1507 aa30.56■■■□□ 2.48
LCK-212ENST00000482949 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
LCK-212ENST00000482949 BICRAQ9NZM4 1560 aa30.42■■■□□ 2.46
LCK-212ENST00000482949 SCRIBQ14160 1630 aa30.11■■■□□ 2.41
LCK-212ENST00000482949 SHROOM4Q9ULL8 1493 aa30.06■■■□□ 2.4
LCK-212ENST00000482949 EIF4G1Q04637 1599 aaKnown RBP29.67■■■□□ 2.34
LCK-212ENST00000482949 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
LCK-212ENST00000482949 CECR2Q9BXF3 1484 aa29.6■■■□□ 2.33
LCK-212ENST00000482949 NCAPD3P42695 1498 aa28.87■■■□□ 2.21
LCK-212ENST00000482949 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
LCK-212ENST00000482949 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
LCK-212ENST00000482949 SMARCA2P51531 1590 aa28.68■■■□□ 2.18
LCK-212ENST00000482949 BAZ1AQ9NRL2 1556 aaPredicted RBP28.67■■■□□ 2.18
LCK-212ENST00000482949 HMGXB3Q12766 1538 aa28.59■■■□□ 2.17
LCK-212ENST00000482949 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
LCK-212ENST00000482949 BAZ1BQ9UIG0 1483 aaKnown RBP28.5■■■□□ 2.15
LCK-212ENST00000482949 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
LCK-212ENST00000482949 ERCC6Q03468 1493 aa28.36■■■□□ 2.13
LCK-212ENST00000482949 NESP48681 1621 aa28.29■■■□□ 2.12
LCK-212ENST00000482949 CUX2O14529 1486 aa28.23■■■□□ 2.11
LCK-212ENST00000482949 WIZO95785 1651 aa28.12■■■□□ 2.09
LCK-212ENST00000482949 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
LCK-212ENST00000482949 DNAJC5Q9H3Z4 198 aa28.05■■■□□ 2.08
LCK-212ENST00000482949 RSF1Q96T23 1441 aaPredicted RBP28.04■■■□□ 2.08
LCK-212ENST00000482949 CADPSQ9ULU8 1353 aa28.02■■■□□ 2.08
LCK-212ENST00000482949 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.08
LCK-212ENST00000482949 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
LCK-212ENST00000482949 KIF21AQ7Z4S6 1674 aa27.84■■■□□ 2.05
LCK-212ENST00000482949 TOP2AP11388 1531 aaKnown RBP27.8■■■□□ 2.04
LCK-212ENST00000482949 CFTRP13569 1480 aa27.72■■■□□ 2.03
LCK-212ENST00000482949 MRC2Q9UBG0 1479 aa27.71■■■□□ 2.03
LCK-212ENST00000482949 FANCD2Q9BXW9 1451 aa27.65■■■□□ 2.02
LCK-212ENST00000482949 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.02
LCK-212ENST00000482949 WDR62O43379 1518 aa27.62■■■□□ 2.01
LCK-212ENST00000482949 CCDC88BA6NC98 1476 aa27.55■■■□□ 2
LCK-212ENST00000482949 URB2Q14146 1524 aaKnown RBP27.4■■□□□ 1.98
LCK-212ENST00000482949 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
LCK-212ENST00000482949 TOPBP1Q92547 1522 aa27.15■■□□□ 1.94
LCK-212ENST00000482949 ABCC8Q09428 1581 aa27.14■■□□□ 1.93
LCK-212ENST00000482949 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
LCK-212ENST00000482949 OSCARQ8IYS5 282 aa27.09■■□□□ 1.93
LCK-212ENST00000482949 ZNF608Q9ULD9 1512 aaPredicted RBP27.04■■□□□ 1.92
LCK-212ENST00000482949 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
LCK-212ENST00000482949 SUPT5HO00267 1087 aaKnown RBP27.02■■□□□ 1.92
LCK-212ENST00000482949 TRIM41Q8WV44 630 aa26.89■■□□□ 1.9
LCK-212ENST00000482949 POLA1P09884 1462 aaPredicted RBP26.88■■□□□ 1.89
LCK-212ENST00000482949 AQRO60306 1485 aaKnown RBP eCLIP26.86■■□□□ 1.89
LCK-212ENST00000482949 TARBP1Q13395 1621 aaKnown RBP26.85■■□□□ 1.89
LCK-212ENST00000482949 SOGA1O94964 1423 aa26.82■■□□□ 1.88
LCK-212ENST00000482949 EIF4G3O43432 1585 aaKnown RBP26.82■■□□□ 1.88
LCK-212ENST00000482949 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
LCK-212ENST00000482949 CUX1P39880 1505 aa26.75■■□□□ 1.87
LCK-212ENST00000482949 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
LCK-212ENST00000482949 TDRD9Q8NDG6 1382 aaKnown RBP26.74■■□□□ 1.87
LCK-212ENST00000482949 FBLN2P98095 1184 aa26.67■■□□□ 1.86
LCK-212ENST00000482949 WDR97A6NE52 1622 aa26.58■■□□□ 1.85
LCK-212ENST00000482949 RIMBP3CA6NJZ7 1639 aa26.55■■□□□ 1.84
LCK-212ENST00000482949 RIMBP3BA6NNM3 1639 aa26.55■■□□□ 1.84
LCK-212ENST00000482949 RIMBP3Q9UFD9 1639 aa26.55■■□□□ 1.84
LCK-212ENST00000482949 SNAPC4Q5SXM2 1469 aa26.54■■□□□ 1.84
LCK-212ENST00000482949 CHD1O14646 1710 aa26.53■■□□□ 1.84
LCK-212ENST00000482949 CHMP7Q8WUX9 453 aaPredicted RBP26.53■■□□□ 1.84
LCK-212ENST00000482949 GRIN2BQ13224 1484 aa26.53■■□□□ 1.84
LCK-212ENST00000482949 ARHGEF11O15085 1522 aa26.53■■□□□ 1.84
LCK-212ENST00000482949 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
LCK-212ENST00000482949 ABCA10Q8WWZ4 1543 aa26.47■■□□□ 1.83
LCK-212ENST00000482949 GAPVD1Q14C86 1478 aa26.47■■□□□ 1.83
LCK-212ENST00000482949 WRNQ14191 1432 aaPredicted RBP eCLIP26.44■■□□□ 1.82
LCK-212ENST00000482949 CYB5RLQ6IPT4 315 aa26.43■■□□□ 1.82
LCK-212ENST00000482949 SYNJ2O15056 1496 aa26.41■■□□□ 1.82
LCK-212ENST00000482949 TOP2BQ02880 1626 aa26.36■■□□□ 1.81
LCK-212ENST00000482949 ABCA5Q8WWZ7 1642 aa26.34■■□□□ 1.81
LCK-212ENST00000482949 SYNJ1O43426 1573 aa26.33■■□□□ 1.8
LCK-212ENST00000482949 BIVM-ERCC5R4GMW8 1640 aa26.32■■□□□ 1.8
LCK-212ENST00000482949 CLASP1Q7Z460 1538 aa26.31■■□□□ 1.8
LCK-212ENST00000482949 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
LCK-212ENST00000482949 ARAP1Q96P48 1450 aa26.29■■□□□ 1.8
LCK-212ENST00000482949 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
LCK-212ENST00000482949 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
LCK-212ENST00000482949 ERICH3Q5RHP9 1530 aa26.13■■□□□ 1.77
LCK-212ENST00000482949 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
LCK-212ENST00000482949 NUP160Q12769 1436 aa26.09■■□□□ 1.77
LCK-212ENST00000482949 TRHP20396 242 aaPredicted RBP26.05■■□□□ 1.76
LCK-212ENST00000482949 CEP170Q5SW79 1584 aa26.03■■□□□ 1.76
LCK-212ENST00000482949 IGF1RP08069 1367 aa25.94■■□□□ 1.74
LCK-212ENST00000482949 KIF27Q86VH2 1401 aa25.93■■□□□ 1.74
LCK-212ENST00000482949 ERCC6L2Q5T890 1561 aa25.93■■□□□ 1.74
LCK-212ENST00000482949 JPH4Q96JJ6 628 aa25.91■■□□□ 1.74
LCK-212ENST00000482949 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
LCK-212ENST00000482949 PRG4Q92954 1404 aaPredicted RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms