RNA–Protein interactions for RNA: ENST00000482935.5

DNMT3A-212, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-212ENST00000482935 NISCHQ9Y2I1 1504 aa20■□□□□ 0.79
DNMT3A-212ENST00000482935 CCDC180Q9P1Z9 1646 aa17.76■□□□□ 0.43
DNMT3A-212ENST00000482935 ABCC9O60706 1549 aa17.43■□□□□ 0.38
DNMT3A-212ENST00000482935 DCAF8L2P0C7V8 631 aa16.8■□□□□ 0.28
DNMT3A-212ENST00000482935 RB1CC1Q8TDY2 1594 aa16.76■□□□□ 0.27
DNMT3A-212ENST00000482935 NACADO15069 1562 aa16.72■□□□□ 0.27
DNMT3A-212ENST00000482935 ZCCHC6Q5VYS8 1495 aaKnown RBP16.66■□□□□ 0.26
DNMT3A-212ENST00000482935 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
DNMT3A-212ENST00000482935 DCAF1Q9Y4B6 1507 aa16.53■□□□□ 0.24
DNMT3A-212ENST00000482935 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
DNMT3A-212ENST00000482935 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
DNMT3A-212ENST00000482935 SCRIBQ14160 1630 aa16.25■□□□□ 0.19
DNMT3A-212ENST00000482935 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.18
DNMT3A-212ENST00000482935 SHROOM4Q9ULL8 1493 aa16.07■□□□□ 0.16
DNMT3A-212ENST00000482935 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
DNMT3A-212ENST00000482935 EIF4G1Q04637 1599 aaKnown RBP15.81■□□□□ 0.12
DNMT3A-212ENST00000482935 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
DNMT3A-212ENST00000482935 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
DNMT3A-212ENST00000482935 SMARCA4P51532 1647 aa15.52■□□□□ 0.08
DNMT3A-212ENST00000482935 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
DNMT3A-212ENST00000482935 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
DNMT3A-212ENST00000482935 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
DNMT3A-212ENST00000482935 NCAPD3P42695 1498 aa15.43■□□□□ 0.06
DNMT3A-212ENST00000482935 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
DNMT3A-212ENST00000482935 HMGXB3Q12766 1538 aa15.35■□□□□ 0.05
DNMT3A-212ENST00000482935 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
DNMT3A-212ENST00000482935 PEG3Q9GZU2 1588 aa15.34■□□□□ 0.05
DNMT3A-212ENST00000482935 RSF1Q96T23 1441 aaPredicted RBP15.25■□□□□ 0.03
DNMT3A-212ENST00000482935 WIZO95785 1651 aa15.24■□□□□ 0.03
DNMT3A-212ENST00000482935 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
DNMT3A-212ENST00000482935 NESP48681 1621 aa15.06■□□□□ 0
DNMT3A-212ENST00000482935 ERCC6Q03468 1493 aa15.06■□□□□ 0
DNMT3A-212ENST00000482935 LAMC3Q9Y6N6 1575 aa15.02■□□□□ -0
DNMT3A-212ENST00000482935 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
DNMT3A-212ENST00000482935 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
DNMT3A-212ENST00000482935 SUPT5HO00267 1087 aaKnown RBP14.92□□□□□ -0.02
DNMT3A-212ENST00000482935 CCDC88BA6NC98 1476 aa14.92□□□□□ -0.02
DNMT3A-212ENST00000482935 CFTRP13569 1480 aa14.89□□□□□ -0.03
DNMT3A-212ENST00000482935 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
DNMT3A-212ENST00000482935 CUX2O14529 1486 aa14.86□□□□□ -0.03
DNMT3A-212ENST00000482935 FANCD2Q9BXW9 1451 aa14.83□□□□□ -0.03
DNMT3A-212ENST00000482935 THOC2Q8NI27 1593 aaKnown RBP14.82□□□□□ -0.04
DNMT3A-212ENST00000482935 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
DNMT3A-212ENST00000482935 MRC2Q9UBG0 1479 aa14.79□□□□□ -0.04
DNMT3A-212ENST00000482935 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
DNMT3A-212ENST00000482935 WDR62O43379 1518 aa14.72□□□□□ -0.05
DNMT3A-212ENST00000482935 URB2Q14146 1524 aaKnown RBP14.66□□□□□ -0.06
DNMT3A-212ENST00000482935 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
DNMT3A-212ENST00000482935 TOPBP1Q92547 1522 aa14.58□□□□□ -0.08
DNMT3A-212ENST00000482935 DNMBPQ6XZF7 1577 aa14.56□□□□□ -0.08
DNMT3A-212ENST00000482935 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
DNMT3A-212ENST00000482935 CUX1P39880 1505 aa14.46□□□□□ -0.09
DNMT3A-212ENST00000482935 POLA1P09884 1462 aaPredicted RBP14.45□□□□□ -0.1
DNMT3A-212ENST00000482935 FGD5Q6ZNL6 1462 aa14.43□□□□□ -0.1
DNMT3A-212ENST00000482935 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
DNMT3A-212ENST00000482935 SOGA1O94964 1423 aa14.41□□□□□ -0.1
DNMT3A-212ENST00000482935 DNAJC5Q9H3Z4 198 aa14.41□□□□□ -0.1
DNMT3A-212ENST00000482935 RAD54L2Q9Y4B4 1467 aa14.4□□□□□ -0.1
DNMT3A-212ENST00000482935 TARBP1Q13395 1621 aaKnown RBP14.4□□□□□ -0.1
DNMT3A-212ENST00000482935 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.1
DNMT3A-212ENST00000482935 EIF4G3O43432 1585 aaKnown RBP14.36□□□□□ -0.11
DNMT3A-212ENST00000482935 AQRO60306 1485 aaKnown RBP eCLIP14.36□□□□□ -0.112e-7■■■□□ 18.4
DNMT3A-212ENST00000482935 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
DNMT3A-212ENST00000482935 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
DNMT3A-212ENST00000482935 TOP2BQ02880 1626 aa14.33□□□□□ -0.11
DNMT3A-212ENST00000482935 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
DNMT3A-212ENST00000482935 WDR97A6NE52 1622 aa14.3□□□□□ -0.12
DNMT3A-212ENST00000482935 ABCA10Q8WWZ4 1543 aa14.28□□□□□ -0.12
DNMT3A-212ENST00000482935 OSCARQ8IYS5 282 aa14.27□□□□□ -0.13
DNMT3A-212ENST00000482935 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
DNMT3A-212ENST00000482935 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
DNMT3A-212ENST00000482935 FBLN2P98095 1184 aa14.24□□□□□ -0.13
DNMT3A-212ENST00000482935 SNAPC4Q5SXM2 1469 aa14.23□□□□□ -0.13
DNMT3A-212ENST00000482935 ABCA5Q8WWZ7 1642 aa14.21□□□□□ -0.13
DNMT3A-212ENST00000482935 MAGI1Q96QZ7 1491 aaPredicted RBP14.2□□□□□ -0.14
DNMT3A-212ENST00000482935 PBRM1Q86U86 1689 aa14.18□□□□□ -0.14
DNMT3A-212ENST00000482935 CHMP7Q8WUX9 453 aaPredicted RBP14.18□□□□□ -0.14
DNMT3A-212ENST00000482935 CHD1O14646 1710 aa14.17□□□□□ -0.14
DNMT3A-212ENST00000482935 SYNJ2O15056 1496 aa14.15□□□□□ -0.14
DNMT3A-212ENST00000482935 ERICH3Q5RHP9 1530 aa14.11□□□□□ -0.15
DNMT3A-212ENST00000482935 KIF27Q86VH2 1401 aa14.1□□□□□ -0.15
DNMT3A-212ENST00000482935 ADAMTS12P58397 1594 aa14.09□□□□□ -0.15
DNMT3A-212ENST00000482935 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
DNMT3A-212ENST00000482935 FHAD1B1AJZ9 1412 aa14.08□□□□□ -0.15
DNMT3A-212ENST00000482935 GRIN2AQ12879 1464 aa14.06□□□□□ -0.16
DNMT3A-212ENST00000482935 IGF1RP08069 1367 aa14.03□□□□□ -0.16
DNMT3A-212ENST00000482935 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.16
DNMT3A-212ENST00000482935 ARHGEF11O15085 1522 aa14.01□□□□□ -0.17
DNMT3A-212ENST00000482935 RIMBP3CA6NJZ7 1639 aa14□□□□□ -0.17
DNMT3A-212ENST00000482935 RIMBP3BA6NNM3 1639 aa14□□□□□ -0.17
DNMT3A-212ENST00000482935 RIMBP3Q9UFD9 1639 aa14□□□□□ -0.17
DNMT3A-212ENST00000482935 NUP160Q12769 1436 aa13.98□□□□□ -0.17
DNMT3A-212ENST00000482935 CUL7Q14999 1698 aa13.98□□□□□ -0.17
DNMT3A-212ENST00000482935 CEP170Q5SW79 1584 aa13.96□□□□□ -0.17
DNMT3A-212ENST00000482935 CARMIL1Q5VZK9 1371 aa13.96□□□□□ -0.18
DNMT3A-212ENST00000482935 RUSC2Q8N2Y8 1516 aa13.94□□□□□ -0.18
DNMT3A-212ENST00000482935 CYB5RLQ6IPT4 315 aa13.92□□□□□ -0.18
DNMT3A-212ENST00000482935 ARAP1Q96P48 1450 aa13.89□□□□□ -0.19
DNMT3A-212ENST00000482935 CHIC1Q5VXU3 224 aa13.88□□□□□ -0.19
DNMT3A-212ENST00000482935 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms