RNA–Protein interactions for RNA: ENST00000482916.1

SHISA9-202, Transcript of shisa family member 9, humanhuman

TSL 4

Gene SHISA9, Length 556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-202ENST00000482916 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
SHISA9-202ENST00000482916 CCDC180Q9P1Z9 1646 aa29.53■■■□□ 2.32
SHISA9-202ENST00000482916 ABCC9O60706 1549 aa29.19■■■□□ 2.26
SHISA9-202ENST00000482916 RB1CC1Q8TDY2 1594 aa27.95■■■□□ 2.07
SHISA9-202ENST00000482916 NACADO15069 1562 aa27.82■■■□□ 2.04
SHISA9-202ENST00000482916 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
SHISA9-202ENST00000482916 MYO15BQ96JP2 1530 aa27.54■■■□□ 2
SHISA9-202ENST00000482916 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
SHISA9-202ENST00000482916 UNC13AQ9UPW8 1703 aa27.33■■□□□ 1.96
SHISA9-202ENST00000482916 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
SHISA9-202ENST00000482916 PABPN1Q86U42 306 aaKnown RBP eCLIP27.17■■□□□ 1.94
SHISA9-202ENST00000482916 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
SHISA9-202ENST00000482916 DNAJC5BQ9UF47 199 aa27.08■■□□□ 1.93
SHISA9-202ENST00000482916 SCRIBQ14160 1630 aa26.89■■□□□ 1.9
SHISA9-202ENST00000482916 SHROOM4Q9ULL8 1493 aa26.83■■□□□ 1.89
SHISA9-202ENST00000482916 EIF4G1Q04637 1599 aaKnown RBP26.43■■□□□ 1.82
SHISA9-202ENST00000482916 CC2D2AQ9P2K1 1620 aa26.4■■□□□ 1.82
SHISA9-202ENST00000482916 CECR2Q9BXF3 1484 aa26.28■■□□□ 1.8
SHISA9-202ENST00000482916 SMARCA4P51532 1647 aa25.69■■□□□ 1.7
SHISA9-202ENST00000482916 NCAPD3P42695 1498 aa25.65■■□□□ 1.7
SHISA9-202ENST00000482916 ATAD2BQ9ULI0 1458 aa25.61■■□□□ 1.69
SHISA9-202ENST00000482916 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
SHISA9-202ENST00000482916 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
SHISA9-202ENST00000482916 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
SHISA9-202ENST00000482916 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
SHISA9-202ENST00000482916 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
SHISA9-202ENST00000482916 MROH2BQ7Z745 1585 aa25.39■■□□□ 1.66
SHISA9-202ENST00000482916 DNAJC5Q9H3Z4 198 aa25.22■■□□□ 1.63
SHISA9-202ENST00000482916 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
SHISA9-202ENST00000482916 NESP48681 1621 aa25.15■■□□□ 1.62
SHISA9-202ENST00000482916 WIZO95785 1651 aa25.12■■□□□ 1.61
SHISA9-202ENST00000482916 CUX2O14529 1486 aa25.09■■□□□ 1.61
SHISA9-202ENST00000482916 LAMC3Q9Y6N6 1575 aa25.07■■□□□ 1.6
SHISA9-202ENST00000482916 RSF1Q96T23 1441 aaPredicted RBP24.96■■□□□ 1.59
SHISA9-202ENST00000482916 PDS5BQ9NTI5 1447 aa24.89■■□□□ 1.58
SHISA9-202ENST00000482916 THOC2Q8NI27 1593 aaKnown RBP24.88■■□□□ 1.57
SHISA9-202ENST00000482916 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
SHISA9-202ENST00000482916 CADPSQ9ULU8 1353 aa24.88■■□□□ 1.57
SHISA9-202ENST00000482916 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
SHISA9-202ENST00000482916 CFTRP13569 1480 aa24.67■■□□□ 1.54
SHISA9-202ENST00000482916 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
SHISA9-202ENST00000482916 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.53
SHISA9-202ENST00000482916 FANCD2Q9BXW9 1451 aa24.61■■□□□ 1.53
SHISA9-202ENST00000482916 WDR62O43379 1518 aa24.61■■□□□ 1.53
SHISA9-202ENST00000482916 PRDM2Q13029 1718 aa24.52■■□□□ 1.52
SHISA9-202ENST00000482916 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
SHISA9-202ENST00000482916 URB2Q14146 1524 aaKnown RBP24.38■■□□□ 1.49
SHISA9-202ENST00000482916 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
SHISA9-202ENST00000482916 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
SHISA9-202ENST00000482916 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.45
SHISA9-202ENST00000482916 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
SHISA9-202ENST00000482916 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
SHISA9-202ENST00000482916 SUPT5HO00267 1087 aaKnown RBP24.02■■□□□ 1.44
SHISA9-202ENST00000482916 EIF4G3O43432 1585 aaKnown RBP23.96■■□□□ 1.43
SHISA9-202ENST00000482916 POLA1P09884 1462 aaPredicted RBP23.95■■□□□ 1.42
SHISA9-202ENST00000482916 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.42
SHISA9-202ENST00000482916 OSCARQ8IYS5 282 aa23.92■■□□□ 1.42
SHISA9-202ENST00000482916 CUX1P39880 1505 aa23.85■■□□□ 1.41
SHISA9-202ENST00000482916 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
SHISA9-202ENST00000482916 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.4
SHISA9-202ENST00000482916 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
SHISA9-202ENST00000482916 SOGA1O94964 1423 aa23.82■■□□□ 1.4
SHISA9-202ENST00000482916 WDR97A6NE52 1622 aa23.78■■□□□ 1.4
SHISA9-202ENST00000482916 TRIM41Q8WV44 630 aa23.77■■□□□ 1.4
SHISA9-202ENST00000482916 CHD1O14646 1710 aa23.73■■□□□ 1.39
SHISA9-202ENST00000482916 TDRD9Q8NDG6 1382 aaKnown RBP23.72■■□□□ 1.39
SHISA9-202ENST00000482916 SNAPC4Q5SXM2 1469 aa23.64■■□□□ 1.38
SHISA9-202ENST00000482916 RIMBP3CA6NJZ7 1639 aa23.63■■□□□ 1.37
SHISA9-202ENST00000482916 RIMBP3BA6NNM3 1639 aa23.63■■□□□ 1.37
SHISA9-202ENST00000482916 RIMBP3Q9UFD9 1639 aa23.63■■□□□ 1.37
SHISA9-202ENST00000482916 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
SHISA9-202ENST00000482916 FBLN2P98095 1184 aa23.61■■□□□ 1.37
SHISA9-202ENST00000482916 MAGI1Q96QZ7 1491 aaPredicted RBP23.6■■□□□ 1.37
SHISA9-202ENST00000482916 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
SHISA9-202ENST00000482916 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
SHISA9-202ENST00000482916 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
SHISA9-202ENST00000482916 PBRM1Q86U86 1689 aa23.58■■□□□ 1.37
SHISA9-202ENST00000482916 TOP2BQ02880 1626 aa23.58■■□□□ 1.36
SHISA9-202ENST00000482916 WRNQ14191 1432 aaPredicted RBP eCLIP23.57■■□□□ 1.36
SHISA9-202ENST00000482916 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
SHISA9-202ENST00000482916 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
SHISA9-202ENST00000482916 SYNJ1O43426 1573 aa23.53■■□□□ 1.36
SHISA9-202ENST00000482916 SYNJ2O15056 1496 aa23.51■■□□□ 1.35
SHISA9-202ENST00000482916 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
SHISA9-202ENST00000482916 CLASP1Q7Z460 1538 aa23.45■■□□□ 1.34
SHISA9-202ENST00000482916 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
SHISA9-202ENST00000482916 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
SHISA9-202ENST00000482916 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.33
SHISA9-202ENST00000482916 GRIN2AQ12879 1464 aa23.31■■□□□ 1.32
SHISA9-202ENST00000482916 ERICH3Q5RHP9 1530 aa23.31■■□□□ 1.32
SHISA9-202ENST00000482916 FHAD1B1AJZ9 1412 aa23.27■■□□□ 1.32
SHISA9-202ENST00000482916 NUP160Q12769 1436 aa23.22■■□□□ 1.31
SHISA9-202ENST00000482916 CEP170Q5SW79 1584 aa23.22■■□□□ 1.31
SHISA9-202ENST00000482916 KIF27Q86VH2 1401 aa23.1■■□□□ 1.29
SHISA9-202ENST00000482916 SHROOM2Q13796 1616 aa23.1■■□□□ 1.29
SHISA9-202ENST00000482916 ERCC6L2Q5T890 1561 aa23.07■■□□□ 1.28
SHISA9-202ENST00000482916 CUL7Q14999 1698 aa23.06■■□□□ 1.28
SHISA9-202ENST00000482916 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
SHISA9-202ENST00000482916 IGF1RP08069 1367 aa23.01■■□□□ 1.27
SHISA9-202ENST00000482916 TRHP20396 242 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms