RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 NISCHQ9Y2I1 1504 aa36.96■■■■□ 3.51
COL16A1-213ENST00000482910 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
COL16A1-213ENST00000482910 ABCC9O60706 1549 aa32.21■■■□□ 2.75
COL16A1-213ENST00000482910 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
COL16A1-213ENST00000482910 NACADO15069 1562 aa31■■■□□ 2.55
COL16A1-213ENST00000482910 MYO15BQ96JP2 1530 aa30.84■■■□□ 2.53
COL16A1-213ENST00000482910 ZCCHC6Q5VYS8 1495 aaKnown RBP30.78■■■□□ 2.52
COL16A1-213ENST00000482910 DCAF8L2P0C7V8 631 aa30.77■■■□□ 2.52
COL16A1-213ENST00000482910 DCAF1Q9Y4B6 1507 aa30.66■■■□□ 2.5
COL16A1-213ENST00000482910 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
COL16A1-213ENST00000482910 BICRAQ9NZM4 1560 aa30.07■■■□□ 2.4
COL16A1-213ENST00000482910 PABPN1Q86U42 306 aaKnown RBP eCLIP30.04■■■□□ 2.41e-6■■■■□ 25.6
COL16A1-213ENST00000482910 SCRIBQ14160 1630 aa29.95■■■□□ 2.38
COL16A1-213ENST00000482910 SHROOM4Q9ULL8 1493 aa29.86■■■□□ 2.37
COL16A1-213ENST00000482910 DNAJC5BQ9UF47 199 aa29.79■■■□□ 2.36
COL16A1-213ENST00000482910 EIF4G1Q04637 1599 aaKnown RBP29.29■■■□□ 2.28
COL16A1-213ENST00000482910 CC2D2AQ9P2K1 1620 aa29.17■■■□□ 2.26
COL16A1-213ENST00000482910 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
COL16A1-213ENST00000482910 SMARCA4P51532 1647 aa28.7■■■□□ 2.19
COL16A1-213ENST00000482910 BAZ1AQ9NRL2 1556 aaPredicted RBP28.67■■■□□ 2.18
COL16A1-213ENST00000482910 NCAPD3P42695 1498 aa28.59■■■□□ 2.17
COL16A1-213ENST00000482910 SMARCA2P51531 1590 aa28.56■■■□□ 2.16
COL16A1-213ENST00000482910 ATAD2BQ9ULI0 1458 aa28.56■■■□□ 2.16
COL16A1-213ENST00000482910 PEG3Q9GZU2 1588 aa28.48■■■□□ 2.15
COL16A1-213ENST00000482910 HMGXB3Q12766 1538 aa28.46■■■□□ 2.15
COL16A1-213ENST00000482910 MROH2BQ7Z745 1585 aa28.45■■■□□ 2.14
COL16A1-213ENST00000482910 BAZ1BQ9UIG0 1483 aaKnown RBP28.31■■■□□ 2.12
COL16A1-213ENST00000482910 WIZO95785 1651 aa28.13■■■□□ 2.09
COL16A1-213ENST00000482910 RSF1Q96T23 1441 aaPredicted RBP28.1■■■□□ 2.09
COL16A1-213ENST00000482910 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
COL16A1-213ENST00000482910 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
COL16A1-213ENST00000482910 NESP48681 1621 aa27.85■■■□□ 2.05
COL16A1-213ENST00000482910 ERCC6Q03468 1493 aa27.79■■■□□ 2.04
COL16A1-213ENST00000482910 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
COL16A1-213ENST00000482910 PDS5BQ9NTI5 1447 aa27.66■■■□□ 2.02
COL16A1-213ENST00000482910 CUX2O14529 1486 aa27.61■■■□□ 2.01
COL16A1-213ENST00000482910 DNAJC5Q9H3Z4 198 aa27.6■■■□□ 2.01
COL16A1-213ENST00000482910 CFTRP13569 1480 aa27.57■■■□□ 2
COL16A1-213ENST00000482910 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
COL16A1-213ENST00000482910 THOC2Q8NI27 1593 aaKnown RBP27.51■■□□□ 1.99
COL16A1-213ENST00000482910 CCDC88BA6NC98 1476 aa27.51■■□□□ 1.99
COL16A1-213ENST00000482910 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.98
COL16A1-213ENST00000482910 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
COL16A1-213ENST00000482910 PRDM2Q13029 1718 aa27.37■■□□□ 1.97
COL16A1-213ENST00000482910 MRC2Q9UBG0 1479 aa27.36■■□□□ 1.97
COL16A1-213ENST00000482910 WDR62O43379 1518 aa27.3■■□□□ 1.96
COL16A1-213ENST00000482910 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
COL16A1-213ENST00000482910 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
COL16A1-213ENST00000482910 ABCC8Q09428 1581 aa27.01■■□□□ 1.91
COL16A1-213ENST00000482910 TOPBP1Q92547 1522 aa26.95■■□□□ 1.91
COL16A1-213ENST00000482910 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
COL16A1-213ENST00000482910 IFT140Q96RY7 1462 aa26.82■■□□□ 1.88
COL16A1-213ENST00000482910 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
COL16A1-213ENST00000482910 CUX1P39880 1505 aa26.7■■□□□ 1.87
COL16A1-213ENST00000482910 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
COL16A1-213ENST00000482910 ZNF608Q9ULD9 1512 aaPredicted RBP26.65■■□□□ 1.86
COL16A1-213ENST00000482910 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
COL16A1-213ENST00000482910 SOGA1O94964 1423 aa26.59■■□□□ 1.85
COL16A1-213ENST00000482910 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
COL16A1-213ENST00000482910 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
COL16A1-213ENST00000482910 WDR97A6NE52 1622 aa26.54■■□□□ 1.84
COL16A1-213ENST00000482910 WRNQ14191 1432 aaPredicted RBP eCLIP26.5■■□□□ 1.83
COL16A1-213ENST00000482910 BIVM-ERCC5R4GMW8 1640 aa26.49■■□□□ 1.83
COL16A1-213ENST00000482910 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.83
COL16A1-213ENST00000482910 TOP2BQ02880 1626 aa26.48■■□□□ 1.83
COL16A1-213ENST00000482910 SYNJ1O43426 1573 aa26.42■■□□□ 1.82
COL16A1-213ENST00000482910 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
COL16A1-213ENST00000482910 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
COL16A1-213ENST00000482910 OSCARQ8IYS5 282 aa26.39■■□□□ 1.82
COL16A1-213ENST00000482910 GRIN2BQ13224 1484 aa26.32■■□□□ 1.8
COL16A1-213ENST00000482910 ABCA5Q8WWZ7 1642 aa26.3■■□□□ 1.8
COL16A1-213ENST00000482910 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
COL16A1-213ENST00000482910 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
COL16A1-213ENST00000482910 SNAPC4Q5SXM2 1469 aa26.26■■□□□ 1.79
COL16A1-213ENST00000482910 CHD1O14646 1710 aa26.25■■□□□ 1.79
COL16A1-213ENST00000482910 PBRM1Q86U86 1689 aa26.25■■□□□ 1.79
COL16A1-213ENST00000482910 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
COL16A1-213ENST00000482910 TRIM41Q8WV44 630 aa26.15■■□□□ 1.78
COL16A1-213ENST00000482910 FBLN2P98095 1184 aa26.13■■□□□ 1.77
COL16A1-213ENST00000482910 CHMP7Q8WUX9 453 aaPredicted RBP26.11■■□□□ 1.77
COL16A1-213ENST00000482910 ERICH3Q5RHP9 1530 aa26.1■■□□□ 1.77
COL16A1-213ENST00000482910 ADAMTS12P58397 1594 aa26.04■■□□□ 1.76
COL16A1-213ENST00000482910 CLASP1Q7Z460 1538 aa26■■□□□ 1.75
COL16A1-213ENST00000482910 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
COL16A1-213ENST00000482910 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
COL16A1-213ENST00000482910 KIF27Q86VH2 1401 aa25.97■■□□□ 1.75
COL16A1-213ENST00000482910 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
COL16A1-213ENST00000482910 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
COL16A1-213ENST00000482910 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
COL16A1-213ENST00000482910 ARHGEF11O15085 1522 aa25.97■■□□□ 1.75
COL16A1-213ENST00000482910 NUP160Q12769 1436 aa25.88■■□□□ 1.73
COL16A1-213ENST00000482910 IGF1RP08069 1367 aa25.86■■□□□ 1.73
COL16A1-213ENST00000482910 CUL7Q14999 1698 aa25.83■■□□□ 1.73
COL16A1-213ENST00000482910 CEP170Q5SW79 1584 aa25.83■■□□□ 1.73
COL16A1-213ENST00000482910 ARAP1Q96P48 1450 aa25.75■■□□□ 1.71
COL16A1-213ENST00000482910 SHROOM2Q13796 1616 aa25.7■■□□□ 1.71
COL16A1-213ENST00000482910 CARMIL1Q5VZK9 1371 aa25.7■■□□□ 1.71
COL16A1-213ENST00000482910 CYB5RLQ6IPT4 315 aa25.68■■□□□ 1.7
COL16A1-213ENST00000482910 RUSC2Q8N2Y8 1516 aa25.66■■□□□ 1.7
COL16A1-213ENST00000482910 KIAA0586Q9BVV6 1533 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms