RNA–Protein interactions for RNA: ENST00000482851.1

SUSD1-207, Transcript of sushi domain containing 1, humanhuman

TSL 3

Gene SUSD1, Length 672 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-207ENST00000482851 NISCHQ9Y2I1 1504 aa21.44■■□□□ 1.02
SUSD1-207ENST00000482851 ABCC9O60706 1549 aa19.5■□□□□ 0.71
SUSD1-207ENST00000482851 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
SUSD1-207ENST00000482851 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
SUSD1-207ENST00000482851 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
SUSD1-207ENST00000482851 NACADO15069 1562 aa18.27■□□□□ 0.52
SUSD1-207ENST00000482851 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
SUSD1-207ENST00000482851 DCAF8L2P0C7V8 631 aa18.08■□□□□ 0.48
SUSD1-207ENST00000482851 UNC13AQ9UPW8 1703 aa18.07■□□□□ 0.48
SUSD1-207ENST00000482851 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
SUSD1-207ENST00000482851 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
SUSD1-207ENST00000482851 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
SUSD1-207ENST00000482851 DCAF1Q9Y4B6 1507 aa17.68■□□□□ 0.42
SUSD1-207ENST00000482851 SHROOM4Q9ULL8 1493 aa17.64■□□□□ 0.41
SUSD1-207ENST00000482851 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
SUSD1-207ENST00000482851 CC2D2AQ9P2K1 1620 aa17.6■□□□□ 0.41
SUSD1-207ENST00000482851 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
SUSD1-207ENST00000482851 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
SUSD1-207ENST00000482851 DNAJC5Q9H3Z4 198 aa17.04■□□□□ 0.32
SUSD1-207ENST00000482851 NCAPD3P42695 1498 aa16.89■□□□□ 0.29
SUSD1-207ENST00000482851 CUX2O14529 1486 aa16.84■□□□□ 0.29
SUSD1-207ENST00000482851 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
SUSD1-207ENST00000482851 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
SUSD1-207ENST00000482851 SMARCA4P51532 1647 aa16.77■□□□□ 0.27
SUSD1-207ENST00000482851 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
SUSD1-207ENST00000482851 NESP48681 1621 aa16.73■□□□□ 0.27
SUSD1-207ENST00000482851 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
SUSD1-207ENST00000482851 BAZ1BQ9UIG0 1483 aaKnown RBP16.62■□□□□ 0.25
SUSD1-207ENST00000482851 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
SUSD1-207ENST00000482851 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
SUSD1-207ENST00000482851 THOC2Q8NI27 1593 aaKnown RBP16.59■□□□□ 0.25
SUSD1-207ENST00000482851 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
SUSD1-207ENST00000482851 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
SUSD1-207ENST00000482851 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
SUSD1-207ENST00000482851 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
SUSD1-207ENST00000482851 CADPSQ9ULU8 1353 aa16.36■□□□□ 0.21
SUSD1-207ENST00000482851 WIZO95785 1651 aa16.33■□□□□ 0.2
SUSD1-207ENST00000482851 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
SUSD1-207ENST00000482851 WDR62O43379 1518 aa16.3■□□□□ 0.2
SUSD1-207ENST00000482851 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
SUSD1-207ENST00000482851 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
SUSD1-207ENST00000482851 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
SUSD1-207ENST00000482851 CFTRP13569 1480 aa16.16■□□□□ 0.18
SUSD1-207ENST00000482851 RSF1Q96T23 1441 aaPredicted RBP16.13■□□□□ 0.17
SUSD1-207ENST00000482851 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
SUSD1-207ENST00000482851 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
SUSD1-207ENST00000482851 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
SUSD1-207ENST00000482851 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
SUSD1-207ENST00000482851 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
SUSD1-207ENST00000482851 CCDC88BA6NC98 1476 aa15.92■□□□□ 0.14
SUSD1-207ENST00000482851 RIMBP3CA6NJZ7 1639 aa15.89■□□□□ 0.13
SUSD1-207ENST00000482851 RIMBP3BA6NNM3 1639 aa15.89■□□□□ 0.13
SUSD1-207ENST00000482851 RIMBP3Q9UFD9 1639 aa15.89■□□□□ 0.13
SUSD1-207ENST00000482851 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
SUSD1-207ENST00000482851 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
SUSD1-207ENST00000482851 ARHGEF11O15085 1522 aa15.82■□□□□ 0.12
SUSD1-207ENST00000482851 EIF4G3O43432 1585 aaKnown RBP15.82■□□□□ 0.12
SUSD1-207ENST00000482851 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
SUSD1-207ENST00000482851 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
SUSD1-207ENST00000482851 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.112e-8■□□□□ 8.5
SUSD1-207ENST00000482851 ABCC8Q09428 1581 aa15.74■□□□□ 0.11
SUSD1-207ENST00000482851 CHD1O14646 1710 aa15.71■□□□□ 0.11
SUSD1-207ENST00000482851 POLA1P09884 1462 aaPredicted RBP15.7■□□□□ 0.1
SUSD1-207ENST00000482851 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
SUSD1-207ENST00000482851 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
SUSD1-207ENST00000482851 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
SUSD1-207ENST00000482851 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
SUSD1-207ENST00000482851 FBLN2P98095 1184 aa15.59■□□□□ 0.09
SUSD1-207ENST00000482851 SOGA1O94964 1423 aa15.58■□□□□ 0.08
SUSD1-207ENST00000482851 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
SUSD1-207ENST00000482851 FGD5Q6ZNL6 1462 aa15.57■□□□□ 0.08
SUSD1-207ENST00000482851 CUX1P39880 1505 aa15.56■□□□□ 0.08
SUSD1-207ENST00000482851 CLASP1Q7Z460 1538 aa15.56■□□□□ 0.08
SUSD1-207ENST00000482851 WDR97A6NE52 1622 aa15.51■□□□□ 0.07
SUSD1-207ENST00000482851 MAGI1Q96QZ7 1491 aaPredicted RBP15.49■□□□□ 0.07
SUSD1-207ENST00000482851 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
SUSD1-207ENST00000482851 GRIN2BQ13224 1484 aa15.46■□□□□ 0.07
SUSD1-207ENST00000482851 SYNJ1O43426 1573 aa15.46■□□□□ 0.07
SUSD1-207ENST00000482851 SYNJ2O15056 1496 aa15.46■□□□□ 0.06
SUSD1-207ENST00000482851 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
SUSD1-207ENST00000482851 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
SUSD1-207ENST00000482851 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
SUSD1-207ENST00000482851 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
SUSD1-207ENST00000482851 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
SUSD1-207ENST00000482851 ERCC6L2Q5T890 1561 aa15.34■□□□□ 0.05
SUSD1-207ENST00000482851 GRIN2AQ12879 1464 aa15.3■□□□□ 0.04
SUSD1-207ENST00000482851 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
SUSD1-207ENST00000482851 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
SUSD1-207ENST00000482851 NUP160Q12769 1436 aa15.27■□□□□ 0.04
SUSD1-207ENST00000482851 WRNQ14191 1432 aaPredicted RBP eCLIP15.24■□□□□ 0.03
SUSD1-207ENST00000482851 SHROOM2Q13796 1616 aa15.23■□□□□ 0.03
SUSD1-207ENST00000482851 BIVM-ERCC5R4GMW8 1640 aa15.23■□□□□ 0.03
SUSD1-207ENST00000482851 TOP2BQ02880 1626 aa15.22■□□□□ 0.03
SUSD1-207ENST00000482851 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.03
SUSD1-207ENST00000482851 FHAD1B1AJZ9 1412 aa15.19■□□□□ 0.02
SUSD1-207ENST00000482851 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
SUSD1-207ENST00000482851 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
SUSD1-207ENST00000482851 KIF13AQ9H1H9 1805 aa15.11■□□□□ 0.01
SUSD1-207ENST00000482851 PRG4Q92954 1404 aaPredicted RBP15.1■□□□□ 0.01
SUSD1-207ENST00000482851 RUSC2Q8N2Y8 1516 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms