RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 NISCHQ9Y2I1 1504 aa24.55■■□□□ 1.52
HLA-DQA1-206ENST00000482745 CCDC180Q9P1Z9 1646 aa21.92■■□□□ 1.1
HLA-DQA1-206ENST00000482745 ABCC9O60706 1549 aa21.64■■□□□ 1.05
HLA-DQA1-206ENST00000482745 RB1CC1Q8TDY2 1594 aa20.72■□□□□ 0.91
HLA-DQA1-206ENST00000482745 NACADO15069 1562 aa20.63■□□□□ 0.89
HLA-DQA1-206ENST00000482745 DCAF8L2P0C7V8 631 aa20.62■□□□□ 0.89
HLA-DQA1-206ENST00000482745 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
HLA-DQA1-206ENST00000482745 MYO15BQ96JP2 1530 aa20.41■□□□□ 0.86
HLA-DQA1-206ENST00000482745 UNC13AQ9UPW8 1703 aa20.28■□□□□ 0.84
HLA-DQA1-206ENST00000482745 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
HLA-DQA1-206ENST00000482745 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
HLA-DQA1-206ENST00000482745 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
HLA-DQA1-206ENST00000482745 SCRIBQ14160 1630 aa20.03■□□□□ 0.8
HLA-DQA1-206ENST00000482745 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
HLA-DQA1-206ENST00000482745 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
HLA-DQA1-206ENST00000482745 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.73
HLA-DQA1-206ENST00000482745 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
HLA-DQA1-206ENST00000482745 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
HLA-DQA1-206ENST00000482745 SMARCA4P51532 1647 aa19.11■□□□□ 0.65
HLA-DQA1-206ENST00000482745 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
HLA-DQA1-206ENST00000482745 ATAD2BQ9ULI0 1458 aa19.02■□□□□ 0.64
HLA-DQA1-206ENST00000482745 NCAPD3P42695 1498 aa19.01■□□□□ 0.63
HLA-DQA1-206ENST00000482745 SMARCA2P51531 1590 aa19■□□□□ 0.63
HLA-DQA1-206ENST00000482745 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
HLA-DQA1-206ENST00000482745 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
HLA-DQA1-206ENST00000482745 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.61
HLA-DQA1-206ENST00000482745 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
HLA-DQA1-206ENST00000482745 WIZO95785 1651 aa18.74■□□□□ 0.59
HLA-DQA1-206ENST00000482745 ERCC6Q03468 1493 aa18.67■□□□□ 0.58
HLA-DQA1-206ENST00000482745 NESP48681 1621 aa18.67■□□□□ 0.58
HLA-DQA1-206ENST00000482745 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
HLA-DQA1-206ENST00000482745 LAMC3Q9Y6N6 1575 aa18.58■□□□□ 0.56
HLA-DQA1-206ENST00000482745 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
HLA-DQA1-206ENST00000482745 CUX2O14529 1486 aa18.49■□□□□ 0.55
HLA-DQA1-206ENST00000482745 KIF21AQ7Z4S6 1674 aa18.47■□□□□ 0.55
HLA-DQA1-206ENST00000482745 CADPSQ9ULU8 1353 aa18.46■□□□□ 0.55
HLA-DQA1-206ENST00000482745 PDS5BQ9NTI5 1447 aa18.45■□□□□ 0.54
HLA-DQA1-206ENST00000482745 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
HLA-DQA1-206ENST00000482745 CFTRP13569 1480 aa18.32■□□□□ 0.52
HLA-DQA1-206ENST00000482745 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
HLA-DQA1-206ENST00000482745 CEP164Q9UPV0 1460 aa18.28■□□□□ 0.52
HLA-DQA1-206ENST00000482745 CCDC88BA6NC98 1476 aa18.28■□□□□ 0.52
HLA-DQA1-206ENST00000482745 FANCD2Q9BXW9 1451 aa18.28■□□□□ 0.52
HLA-DQA1-206ENST00000482745 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
HLA-DQA1-206ENST00000482745 WDR62O43379 1518 aa18.23■□□□□ 0.51
HLA-DQA1-206ENST00000482745 DNAJC5Q9H3Z4 198 aa18.11■□□□□ 0.49
HLA-DQA1-206ENST00000482745 URB2Q14146 1524 aaKnown RBP18.1■□□□□ 0.49
HLA-DQA1-206ENST00000482745 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
HLA-DQA1-206ENST00000482745 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
HLA-DQA1-206ENST00000482745 DNMBPQ6XZF7 1577 aa17.94■□□□□ 0.46
HLA-DQA1-206ENST00000482745 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
HLA-DQA1-206ENST00000482745 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
HLA-DQA1-206ENST00000482745 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
HLA-DQA1-206ENST00000482745 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
HLA-DQA1-206ENST00000482745 TARBP1Q13395 1621 aaKnown RBP17.79■□□□□ 0.44
HLA-DQA1-206ENST00000482745 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
HLA-DQA1-206ENST00000482745 CUX1P39880 1505 aa17.77■□□□□ 0.43
HLA-DQA1-206ENST00000482745 FGD5Q6ZNL6 1462 aa17.74■□□□□ 0.43
HLA-DQA1-206ENST00000482745 RAD54L2Q9Y4B4 1467 aa17.74■□□□□ 0.43
HLA-DQA1-206ENST00000482745 SOGA1O94964 1423 aa17.72■□□□□ 0.43
HLA-DQA1-206ENST00000482745 AQRO60306 1485 aaKnown RBP eCLIP17.71■□□□□ 0.43
HLA-DQA1-206ENST00000482745 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
HLA-DQA1-206ENST00000482745 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
HLA-DQA1-206ENST00000482745 WDR97A6NE52 1622 aa17.62■□□□□ 0.41
HLA-DQA1-206ENST00000482745 CHD1O14646 1710 aa17.61■□□□□ 0.41
HLA-DQA1-206ENST00000482745 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.41
HLA-DQA1-206ENST00000482745 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.4
HLA-DQA1-206ENST00000482745 TOP2BQ02880 1626 aa17.57■□□□□ 0.4
HLA-DQA1-206ENST00000482745 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
HLA-DQA1-206ENST00000482745 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
HLA-DQA1-206ENST00000482745 FBLN2P98095 1184 aa17.56■□□□□ 0.4
HLA-DQA1-206ENST00000482745 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
HLA-DQA1-206ENST00000482745 PBRM1Q86U86 1689 aa17.54■□□□□ 0.4
HLA-DQA1-206ENST00000482745 GRIN2BQ13224 1484 aa17.53■□□□□ 0.4
HLA-DQA1-206ENST00000482745 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
HLA-DQA1-206ENST00000482745 ABCA5Q8WWZ7 1642 aa17.51■□□□□ 0.39
HLA-DQA1-206ENST00000482745 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
HLA-DQA1-206ENST00000482745 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
HLA-DQA1-206ENST00000482745 RIMBP3CA6NJZ7 1639 aa17.47■□□□□ 0.39
HLA-DQA1-206ENST00000482745 RIMBP3BA6NNM3 1639 aa17.47■□□□□ 0.39
HLA-DQA1-206ENST00000482745 RIMBP3Q9UFD9 1639 aa17.47■□□□□ 0.39
HLA-DQA1-206ENST00000482745 CHMP7Q8WUX9 453 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQA1-206ENST00000482745 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
HLA-DQA1-206ENST00000482745 ARHGEF11O15085 1522 aa17.44■□□□□ 0.38
HLA-DQA1-206ENST00000482745 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
HLA-DQA1-206ENST00000482745 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
HLA-DQA1-206ENST00000482745 ERICH3Q5RHP9 1530 aa17.33■□□□□ 0.37
HLA-DQA1-206ENST00000482745 GRIN2AQ12879 1464 aa17.32■□□□□ 0.36
HLA-DQA1-206ENST00000482745 FHAD1B1AJZ9 1412 aa17.29■□□□□ 0.36
HLA-DQA1-206ENST00000482745 ARAP1Q96P48 1450 aa17.28■□□□□ 0.36
HLA-DQA1-206ENST00000482745 CYB5RLQ6IPT4 315 aa17.27■□□□□ 0.36
HLA-DQA1-206ENST00000482745 CEP170Q5SW79 1584 aa17.25■□□□□ 0.35
HLA-DQA1-206ENST00000482745 NUP160Q12769 1436 aa17.23■□□□□ 0.35
HLA-DQA1-206ENST00000482745 KIF27Q86VH2 1401 aa17.22■□□□□ 0.35
HLA-DQA1-206ENST00000482745 CUL7Q14999 1698 aa17.17■□□□□ 0.34
HLA-DQA1-206ENST00000482745 IGF1RP08069 1367 aa17.15■□□□□ 0.34
HLA-DQA1-206ENST00000482745 ERCC6L2Q5T890 1561 aa17.14■□□□□ 0.33
HLA-DQA1-206ENST00000482745 SHROOM2Q13796 1616 aa17.14■□□□□ 0.33
HLA-DQA1-206ENST00000482745 RUSC2Q8N2Y8 1516 aa17.12■□□□□ 0.33
HLA-DQA1-206ENST00000482745 CARMIL1Q5VZK9 1371 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms