RNA–Protein interactions for RNA: ENST00000482681.5

PDE1C-210, Transcript of phosphodiesterase 1C, humanhuman

TSL 2

Gene PDE1C, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-210ENST00000482681 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.49
PDE1C-210ENST00000482681 CCDC180Q9P1Z9 1646 aa27.35■■□□□ 1.97
PDE1C-210ENST00000482681 ABCC9O60706 1549 aa27.18■■□□□ 1.94
PDE1C-210ENST00000482681 RB1CC1Q8TDY2 1594 aa25.95■■□□□ 1.75
PDE1C-210ENST00000482681 DCAF8L2P0C7V8 631 aa25.9■■□□□ 1.74
PDE1C-210ENST00000482681 NACADO15069 1562 aa25.8■■□□□ 1.72
PDE1C-210ENST00000482681 MYO15BQ96JP2 1530 aa25.45■■□□□ 1.66
PDE1C-210ENST00000482681 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.65
PDE1C-210ENST00000482681 PABPN1Q86U42 306 aaKnown RBP eCLIP25.37■■□□□ 1.65
PDE1C-210ENST00000482681 UNC13AQ9UPW8 1703 aa25.36■■□□□ 1.65
PDE1C-210ENST00000482681 DCAF1Q9Y4B6 1507 aa25.22■■□□□ 1.63
PDE1C-210ENST00000482681 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
PDE1C-210ENST00000482681 BICRAQ9NZM4 1560 aa25.11■■□□□ 1.61
PDE1C-210ENST00000482681 SCRIBQ14160 1630 aa25.02■■□□□ 1.6
PDE1C-210ENST00000482681 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
PDE1C-210ENST00000482681 CC2D2AQ9P2K1 1620 aa24.54■■□□□ 1.52
PDE1C-210ENST00000482681 EIF4G1Q04637 1599 aaKnown RBP24.53■■□□□ 1.52
PDE1C-210ENST00000482681 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.5
PDE1C-210ENST00000482681 SMARCA4P51532 1647 aa23.84■■□□□ 1.41
PDE1C-210ENST00000482681 NCAPD3P42695 1498 aa23.78■■□□□ 1.4
PDE1C-210ENST00000482681 ATAD2BQ9ULI0 1458 aa23.77■■□□□ 1.4
PDE1C-210ENST00000482681 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
PDE1C-210ENST00000482681 BAZ1AQ9NRL2 1556 aaPredicted RBP23.75■■□□□ 1.39
PDE1C-210ENST00000482681 HMGXB3Q12766 1538 aa23.65■■□□□ 1.38
PDE1C-210ENST00000482681 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
PDE1C-210ENST00000482681 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
PDE1C-210ENST00000482681 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
PDE1C-210ENST00000482681 ERCC6Q03468 1493 aa23.51■■□□□ 1.35
PDE1C-210ENST00000482681 NESP48681 1621 aa23.39■■□□□ 1.33
PDE1C-210ENST00000482681 WIZO95785 1651 aa23.35■■□□□ 1.33
PDE1C-210ENST00000482681 CUX2O14529 1486 aa23.29■■□□□ 1.32
PDE1C-210ENST00000482681 LAMC3Q9Y6N6 1575 aa23.26■■□□□ 1.31
PDE1C-210ENST00000482681 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
PDE1C-210ENST00000482681 PDS5BQ9NTI5 1447 aa23.15■■□□□ 1.3
PDE1C-210ENST00000482681 KIF21AQ7Z4S6 1674 aa23.13■■□□□ 1.29
PDE1C-210ENST00000482681 CADPSQ9ULU8 1353 aa23.11■■□□□ 1.29
PDE1C-210ENST00000482681 THOC2Q8NI27 1593 aaKnown RBP23.08■■□□□ 1.29
PDE1C-210ENST00000482681 TOP2AP11388 1531 aaKnown RBP23.04■■□□□ 1.28
PDE1C-210ENST00000482681 DNAJC5Q9H3Z4 198 aa22.98■■□□□ 1.27
PDE1C-210ENST00000482681 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
PDE1C-210ENST00000482681 CEP164Q9UPV0 1460 aa22.9■■□□□ 1.26
PDE1C-210ENST00000482681 FANCD2Q9BXW9 1451 aa22.88■■□□□ 1.25
PDE1C-210ENST00000482681 CFTRP13569 1480 aa22.87■■□□□ 1.25
PDE1C-210ENST00000482681 WDR62O43379 1518 aa22.82■■□□□ 1.24
PDE1C-210ENST00000482681 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
PDE1C-210ENST00000482681 PRDM2Q13029 1718 aa22.74■■□□□ 1.23
PDE1C-210ENST00000482681 URB2Q14146 1524 aaKnown RBP22.64■■□□□ 1.21
PDE1C-210ENST00000482681 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
PDE1C-210ENST00000482681 TOPBP1Q92547 1522 aa22.46■■□□□ 1.19
PDE1C-210ENST00000482681 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
PDE1C-210ENST00000482681 IFT140Q96RY7 1462 aa22.41■■□□□ 1.18
PDE1C-210ENST00000482681 DNMBPQ6XZF7 1577 aa22.4■■□□□ 1.18
PDE1C-210ENST00000482681 ZNF608Q9ULD9 1512 aaPredicted RBP22.34■■□□□ 1.17
PDE1C-210ENST00000482681 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
PDE1C-210ENST00000482681 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
PDE1C-210ENST00000482681 POLA1P09884 1462 aaPredicted RBP22.23■■□□□ 1.15
PDE1C-210ENST00000482681 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
PDE1C-210ENST00000482681 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.15
PDE1C-210ENST00000482681 AQRO60306 1485 aaKnown RBP eCLIP22.18■■□□□ 1.14
PDE1C-210ENST00000482681 RAD54L2Q9Y4B4 1467 aa22.17■■□□□ 1.14
PDE1C-210ENST00000482681 SOGA1O94964 1423 aa22.17■■□□□ 1.14
PDE1C-210ENST00000482681 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
PDE1C-210ENST00000482681 CUX1P39880 1505 aa22.15■■□□□ 1.14
PDE1C-210ENST00000482681 FBLN2P98095 1184 aa22.1■■□□□ 1.13
PDE1C-210ENST00000482681 TDRD9Q8NDG6 1382 aaKnown RBP22.09■■□□□ 1.13
PDE1C-210ENST00000482681 CHD1O14646 1710 aa22.06■■□□□ 1.12
PDE1C-210ENST00000482681 WDR97A6NE52 1622 aa22.01■■□□□ 1.11
PDE1C-210ENST00000482681 SNAPC4Q5SXM2 1469 aa21.98■■□□□ 1.11
PDE1C-210ENST00000482681 RIMBP3CA6NJZ7 1639 aa21.98■■□□□ 1.11
PDE1C-210ENST00000482681 RIMBP3BA6NNM3 1639 aa21.98■■□□□ 1.11
PDE1C-210ENST00000482681 RIMBP3Q9UFD9 1639 aa21.98■■□□□ 1.11
PDE1C-210ENST00000482681 CHMP7Q8WUX9 453 aaPredicted RBP21.94■■□□□ 1.1
PDE1C-210ENST00000482681 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
PDE1C-210ENST00000482681 ARHGEF11O15085 1522 aa21.92■■□□□ 1.1
PDE1C-210ENST00000482681 GAPVD1Q14C86 1478 aa21.91■■□□□ 1.1
PDE1C-210ENST00000482681 MAGI1Q96QZ7 1491 aaPredicted RBP21.91■■□□□ 1.1
PDE1C-210ENST00000482681 PBRM1Q86U86 1689 aa21.91■■□□□ 1.1
PDE1C-210ENST00000482681 WRNQ14191 1432 aaPredicted RBP eCLIP21.9■■□□□ 1.1
PDE1C-210ENST00000482681 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
PDE1C-210ENST00000482681 TOP2BQ02880 1626 aa21.86■■□□□ 1.09
PDE1C-210ENST00000482681 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
PDE1C-210ENST00000482681 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
PDE1C-210ENST00000482681 SYNJ2O15056 1496 aa21.83■■□□□ 1.09
PDE1C-210ENST00000482681 ABCA5Q8WWZ7 1642 aa21.83■■□□□ 1.08
PDE1C-210ENST00000482681 CYB5RLQ6IPT4 315 aa21.81■■□□□ 1.08
PDE1C-210ENST00000482681 CLASP1Q7Z460 1538 aa21.74■■□□□ 1.07
PDE1C-210ENST00000482681 ARAP1Q96P48 1450 aa21.71■■□□□ 1.07
PDE1C-210ENST00000482681 ADAMTS12P58397 1594 aa21.67■■□□□ 1.06
PDE1C-210ENST00000482681 GRIN2AQ12879 1464 aa21.65■■□□□ 1.06
PDE1C-210ENST00000482681 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
PDE1C-210ENST00000482681 FHAD1B1AJZ9 1412 aa21.63■■□□□ 1.05
PDE1C-210ENST00000482681 TRHP20396 242 aaPredicted RBP21.56■■□□□ 1.04
PDE1C-210ENST00000482681 CEP170Q5SW79 1584 aa21.56■■□□□ 1.04
PDE1C-210ENST00000482681 NUP160Q12769 1436 aa21.53■■□□□ 1.04
PDE1C-210ENST00000482681 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
PDE1C-210ENST00000482681 ERCC6L2Q5T890 1561 aa21.44■■□□□ 1.02
PDE1C-210ENST00000482681 SHROOM2Q13796 1616 aa21.4■■□□□ 1.02
PDE1C-210ENST00000482681 CUL7Q14999 1698 aa21.4■■□□□ 1.02
PDE1C-210ENST00000482681 IGF1RP08069 1367 aa21.38■■□□□ 1.01
PDE1C-210ENST00000482681 JPH4Q96JJ6 628 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms