RNA–Protein interactions for RNA: ENST00000482654.1

PLXNB3-207, Transcript of plexin B3, humanhuman

TSL 5

Gene PLXNB3, Length 717 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-207ENST00000482654 NISCHQ9Y2I1 1504 aa50.33■■■■■ 5.65
PLXNB3-207ENST00000482654 ABCC9O60706 1549 aa45.44■■■■■ 4.86
PLXNB3-207ENST00000482654 CCDC180Q9P1Z9 1646 aa45.28■■■■■ 4.84
PLXNB3-207ENST00000482654 RB1CC1Q8TDY2 1594 aa43.14■■■■■ 4.5
PLXNB3-207ENST00000482654 NACADO15069 1562 aa42.78■■■■■ 4.44
PLXNB3-207ENST00000482654 DNAJC5BQ9UF47 199 aa42.68■■■■■ 4.42
PLXNB3-207ENST00000482654 DCAF8L2P0C7V8 631 aa42.46■■■■■ 4.39
PLXNB3-207ENST00000482654 UNC13AQ9UPW8 1703 aa42.26■■■■■ 4.36
PLXNB3-207ENST00000482654 PABPN1Q86U42 306 aaKnown RBP eCLIP42.22■■■■■ 4.35
PLXNB3-207ENST00000482654 MYO15BQ96JP2 1530 aa42.1■■■■■ 4.33
PLXNB3-207ENST00000482654 BICRAQ9NZM4 1560 aa41.95■■■■■ 4.31
PLXNB3-207ENST00000482654 ZCCHC6Q5VYS8 1495 aaKnown RBP41.73■■■■■ 4.27
PLXNB3-207ENST00000482654 DCAF1Q9Y4B6 1507 aa41.53■■■■■ 4.24
PLXNB3-207ENST00000482654 SCRIBQ14160 1630 aa41.32■■■■■ 4.2
PLXNB3-207ENST00000482654 SHROOM4Q9ULL8 1493 aa41.28■■■■■ 4.2
PLXNB3-207ENST00000482654 CC2D2AQ9P2K1 1620 aa41.04■■■■■ 4.16
PLXNB3-207ENST00000482654 EIF4G1Q04637 1599 aaKnown RBP40.92■■■■■ 4.14
PLXNB3-207ENST00000482654 CECR2Q9BXF3 1484 aa40.91■■■■■ 4.14
PLXNB3-207ENST00000482654 NCAPD3P42695 1498 aa39.47■■■■□ 3.91
PLXNB3-207ENST00000482654 ATAD2BQ9ULI0 1458 aa39.37■■■■□ 3.89
PLXNB3-207ENST00000482654 SMARCA4P51532 1647 aa39.36■■■■□ 3.89
PLXNB3-207ENST00000482654 SMARCA2P51531 1590 aa39.25■■■■□ 3.87
PLXNB3-207ENST00000482654 HMGXB3Q12766 1538 aa39.24■■■■□ 3.87
PLXNB3-207ENST00000482654 DNAJC5Q9H3Z4 198 aa39.23■■■■□ 3.87
PLXNB3-207ENST00000482654 ERCC6Q03468 1493 aa39.22■■■■□ 3.87
PLXNB3-207ENST00000482654 CUX2O14529 1486 aa39.17■■■■□ 3.86
PLXNB3-207ENST00000482654 BAZ1AQ9NRL2 1556 aaPredicted RBP39.08■■■■□ 3.85
PLXNB3-207ENST00000482654 NESP48681 1621 aa39.01■■■■□ 3.84
PLXNB3-207ENST00000482654 BAZ1BQ9UIG0 1483 aaKnown RBP39.01■■■■□ 3.84
PLXNB3-207ENST00000482654 PEG3Q9GZU2 1588 aa38.92■■■■□ 3.82
PLXNB3-207ENST00000482654 MROH2BQ7Z745 1585 aa38.83■■■■□ 3.81
PLXNB3-207ENST00000482654 THOC2Q8NI27 1593 aaKnown RBP38.69■■■■□ 3.78
PLXNB3-207ENST00000482654 LAMC3Q9Y6N6 1575 aa38.65■■■■□ 3.78
PLXNB3-207ENST00000482654 KIF21AQ7Z4S6 1674 aa38.54■■■■□ 3.76
PLXNB3-207ENST00000482654 WIZO95785 1651 aa38.38■■■■□ 3.73
PLXNB3-207ENST00000482654 PDS5BQ9NTI5 1447 aa38.38■■■■□ 3.73
PLXNB3-207ENST00000482654 CADPSQ9ULU8 1353 aa38.25■■■■□ 3.71
PLXNB3-207ENST00000482654 MRC2Q9UBG0 1479 aa38.14■■■■□ 3.7
PLXNB3-207ENST00000482654 WDR62O43379 1518 aa38.07■■■■□ 3.69
PLXNB3-207ENST00000482654 CEP164Q9UPV0 1460 aa37.96■■■■□ 3.67
PLXNB3-207ENST00000482654 RSF1Q96T23 1441 aaPredicted RBP37.92■■■■□ 3.66
PLXNB3-207ENST00000482654 FANCD2Q9BXW9 1451 aa37.89■■■■□ 3.66
PLXNB3-207ENST00000482654 TOP2AP11388 1531 aaKnown RBP37.87■■■■□ 3.65
PLXNB3-207ENST00000482654 CFTRP13569 1480 aa37.83■■■■□ 3.65
PLXNB3-207ENST00000482654 URB2Q14146 1524 aaKnown RBP37.62■■■■□ 3.61
PLXNB3-207ENST00000482654 TRIM41Q8WV44 630 aa37.54■■■■□ 3.6
PLXNB3-207ENST00000482654 PRDM2Q13029 1718 aa37.53■■■■□ 3.6
PLXNB3-207ENST00000482654 CCDC88BA6NC98 1476 aa37.39■■■■□ 3.58
PLXNB3-207ENST00000482654 OSCARQ8IYS5 282 aa37.24■■■■□ 3.55
PLXNB3-207ENST00000482654 ZNF608Q9ULD9 1512 aaPredicted RBP37.19■■■■□ 3.54
PLXNB3-207ENST00000482654 TOPBP1Q92547 1522 aa37.16■■■■□ 3.54
PLXNB3-207ENST00000482654 IFT140Q96RY7 1462 aa37.16■■■■□ 3.54
PLXNB3-207ENST00000482654 DNMBPQ6XZF7 1577 aa37.04■■■■□ 3.52
PLXNB3-207ENST00000482654 EIF4G3O43432 1585 aaKnown RBP37.03■■■■□ 3.52
PLXNB3-207ENST00000482654 RIMBP3CA6NJZ7 1639 aa36.96■■■■□ 3.51
PLXNB3-207ENST00000482654 RIMBP3BA6NNM3 1639 aa36.96■■■■□ 3.51
PLXNB3-207ENST00000482654 RIMBP3Q9UFD9 1639 aa36.96■■■■□ 3.51
PLXNB3-207ENST00000482654 ABCC8Q09428 1581 aa36.96■■■■□ 3.51
PLXNB3-207ENST00000482654 TARBP1Q13395 1621 aaKnown RBP36.87■■■■□ 3.49
PLXNB3-207ENST00000482654 ARHGEF11O15085 1522 aa36.81■■■■□ 3.48
PLXNB3-207ENST00000482654 POLA1P09884 1462 aaPredicted RBP36.79■■■■□ 3.48
PLXNB3-207ENST00000482654 AQRO60306 1485 aaKnown RBP eCLIP36.78■■■■□ 3.48
PLXNB3-207ENST00000482654 CHD1O14646 1710 aa36.78■■■■□ 3.48
PLXNB3-207ENST00000482654 RAD54L2Q9Y4B4 1467 aa36.65■■■■□ 3.46
PLXNB3-207ENST00000482654 FGD5Q6ZNL6 1462 aa36.55■■■■□ 3.44
PLXNB3-207ENST00000482654 SOGA1O94964 1423 aa36.53■■■■□ 3.44
PLXNB3-207ENST00000482654 TDRD9Q8NDG6 1382 aaKnown RBP36.53■■■■□ 3.44
PLXNB3-207ENST00000482654 FBLN2P98095 1184 aa36.52■■■■□ 3.44
PLXNB3-207ENST00000482654 CUX1P39880 1505 aa36.5■■■■□ 3.43
PLXNB3-207ENST00000482654 SNAPC4Q5SXM2 1469 aa36.46■■■■□ 3.43
PLXNB3-207ENST00000482654 ARAP1Q96P48 1450 aa36.46■■■■□ 3.43
PLXNB3-207ENST00000482654 CYB5RLQ6IPT4 315 aa36.43■■■■□ 3.42
PLXNB3-207ENST00000482654 WDR97A6NE52 1622 aa36.43■■■■□ 3.42
PLXNB3-207ENST00000482654 CLASP1Q7Z460 1538 aa36.32■■■■□ 3.4
PLXNB3-207ENST00000482654 MAGI1Q96QZ7 1491 aaPredicted RBP36.3■■■■□ 3.4
PLXNB3-207ENST00000482654 GRIN2BQ13224 1484 aa36.27■■■■□ 3.4
PLXNB3-207ENST00000482654 SYNJ1O43426 1573 aa36.24■■■■□ 3.39
PLXNB3-207ENST00000482654 PBRM1Q86U86 1689 aa36.23■■■■□ 3.39
PLXNB3-207ENST00000482654 CHMP7Q8WUX9 453 aaPredicted RBP36.19■■■■□ 3.38
PLXNB3-207ENST00000482654 SYNJ2O15056 1496 aa36.18■■■■□ 3.38
PLXNB3-207ENST00000482654 GAPVD1Q14C86 1478 aa36.12■■■■□ 3.37
PLXNB3-207ENST00000482654 ABCA5Q8WWZ7 1642 aa36.11■■■■□ 3.37
PLXNB3-207ENST00000482654 SUPT5HO00267 1087 aaKnown RBP36.09■■■■□ 3.37
PLXNB3-207ENST00000482654 TRHP20396 242 aaPredicted RBP36.08■■■■□ 3.37
PLXNB3-207ENST00000482654 ABCA10Q8WWZ4 1543 aa36.08■■■■□ 3.37
PLXNB3-207ENST00000482654 BIVM-ERCC5R4GMW8 1640 aa35.88■■■■□ 3.33
PLXNB3-207ENST00000482654 ADAMTS12P58397 1594 aa35.87■■■■□ 3.33
PLXNB3-207ENST00000482654 WRNQ14191 1432 aaPredicted RBP eCLIP35.86■■■■□ 3.33
PLXNB3-207ENST00000482654 TOP2BQ02880 1626 aa35.85■■■■□ 3.33
PLXNB3-207ENST00000482654 GRIN2AQ12879 1464 aa35.84■■■■□ 3.33
PLXNB3-207ENST00000482654 ERCC6L2Q5T890 1561 aa35.78■■■■□ 3.32
PLXNB3-207ENST00000482654 CEP170Q5SW79 1584 aa35.77■■■■□ 3.32
PLXNB3-207ENST00000482654 NUP160Q12769 1436 aa35.71■■■■□ 3.31
PLXNB3-207ENST00000482654 FHAD1B1AJZ9 1412 aa35.65■■■■□ 3.3
PLXNB3-207ENST00000482654 ERICH3Q5RHP9 1530 aa35.62■■■■□ 3.29
PLXNB3-207ENST00000482654 SHROOM2Q13796 1616 aa35.61■■■■□ 3.29
PLXNB3-207ENST00000482654 RUSC2Q8N2Y8 1516 aa35.38■■■■□ 3.25
PLXNB3-207ENST00000482654 PRG4Q92954 1404 aaPredicted RBP35.36■■■■□ 3.25
PLXNB3-207ENST00000482654 JPH4Q96JJ6 628 aa35.23■■■■□ 3.23
PLXNB3-207ENST00000482654 KIF13AQ9H1H9 1805 aa35.22■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms