RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 NISCHQ9Y2I1 1504 aa30.06■■■□□ 2.4
FAM3D-202ENST00000482623 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
FAM3D-202ENST00000482623 ABCC9O60706 1549 aa26.72■■□□□ 1.87
FAM3D-202ENST00000482623 RB1CC1Q8TDY2 1594 aa25.58■■□□□ 1.69
FAM3D-202ENST00000482623 NACADO15069 1562 aa25.49■■□□□ 1.67
FAM3D-202ENST00000482623 MYO15BQ96JP2 1530 aa25.29■■□□□ 1.64
FAM3D-202ENST00000482623 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
FAM3D-202ENST00000482623 DNAJC5BQ9UF47 199 aa25.06■■□□□ 1.6
FAM3D-202ENST00000482623 PABPN1Q86U42 306 aaKnown RBP eCLIP24.95■■□□□ 1.58
FAM3D-202ENST00000482623 DCAF1Q9Y4B6 1507 aa24.95■■□□□ 1.58
FAM3D-202ENST00000482623 ZCCHC6Q5VYS8 1495 aaKnown RBP24.9■■□□□ 1.58
FAM3D-202ENST00000482623 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
FAM3D-202ENST00000482623 UNC13AQ9UPW8 1703 aa24.75■■□□□ 1.55
FAM3D-202ENST00000482623 SHROOM4Q9ULL8 1493 aa24.67■■□□□ 1.54
FAM3D-202ENST00000482623 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
FAM3D-202ENST00000482623 EIF4G1Q04637 1599 aaKnown RBP24.16■■□□□ 1.46
FAM3D-202ENST00000482623 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
FAM3D-202ENST00000482623 CC2D2AQ9P2K1 1620 aa24.15■■□□□ 1.46
FAM3D-202ENST00000482623 NCAPD3P42695 1498 aa23.58■■□□□ 1.37
FAM3D-202ENST00000482623 ATAD2BQ9ULI0 1458 aa23.44■■□□□ 1.34
FAM3D-202ENST00000482623 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
FAM3D-202ENST00000482623 SMARCA4P51532 1647 aa23.34■■□□□ 1.33
FAM3D-202ENST00000482623 BAZ1AQ9NRL2 1556 aaPredicted RBP23.33■■□□□ 1.33
FAM3D-202ENST00000482623 HMGXB3Q12766 1538 aa23.33■■□□□ 1.32
FAM3D-202ENST00000482623 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
FAM3D-202ENST00000482623 BAZ1BQ9UIG0 1483 aaKnown RBP23.18■■□□□ 1.3
FAM3D-202ENST00000482623 CUX2O14529 1486 aa23.15■■□□□ 1.3
FAM3D-202ENST00000482623 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
FAM3D-202ENST00000482623 DNAJC5Q9H3Z4 198 aa23.09■■□□□ 1.29
FAM3D-202ENST00000482623 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.29
FAM3D-202ENST00000482623 NESP48681 1621 aa22.96■■□□□ 1.27
FAM3D-202ENST00000482623 LAMC3Q9Y6N6 1575 aa22.94■■□□□ 1.26
FAM3D-202ENST00000482623 PDS5BQ9NTI5 1447 aa22.9■■□□□ 1.26
FAM3D-202ENST00000482623 CADPSQ9ULU8 1353 aa22.86■■□□□ 1.25
FAM3D-202ENST00000482623 RSF1Q96T23 1441 aaPredicted RBP22.73■■□□□ 1.23
FAM3D-202ENST00000482623 WIZO95785 1651 aa22.72■■□□□ 1.23
FAM3D-202ENST00000482623 THOC2Q8NI27 1593 aaKnown RBP22.7■■□□□ 1.22
FAM3D-202ENST00000482623 CFTRP13569 1480 aa22.59■■□□□ 1.21
FAM3D-202ENST00000482623 MRC2Q9UBG0 1479 aa22.59■■□□□ 1.21
FAM3D-202ENST00000482623 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.2
FAM3D-202ENST00000482623 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
FAM3D-202ENST00000482623 WDR62O43379 1518 aa22.52■■□□□ 1.19
FAM3D-202ENST00000482623 CEP164Q9UPV0 1460 aa22.51■■□□□ 1.19
FAM3D-202ENST00000482623 FANCD2Q9BXW9 1451 aa22.5■■□□□ 1.19
FAM3D-202ENST00000482623 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
FAM3D-202ENST00000482623 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
FAM3D-202ENST00000482623 OSCARQ8IYS5 282 aa22.19■■□□□ 1.14
FAM3D-202ENST00000482623 ABCC8Q09428 1581 aa22.19■■□□□ 1.14
FAM3D-202ENST00000482623 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
FAM3D-202ENST00000482623 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
FAM3D-202ENST00000482623 TOPBP1Q92547 1522 aa22.06■■□□□ 1.12
FAM3D-202ENST00000482623 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
FAM3D-202ENST00000482623 ZNF608Q9ULD9 1512 aaPredicted RBP21.95■■□□□ 1.1
FAM3D-202ENST00000482623 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
FAM3D-202ENST00000482623 POLA1P09884 1462 aaPredicted RBP21.85■■□□□ 1.09
FAM3D-202ENST00000482623 TARBP1Q13395 1621 aaKnown RBP21.83■■□□□ 1.08
FAM3D-202ENST00000482623 SOGA1O94964 1423 aa21.82■■□□□ 1.08
FAM3D-202ENST00000482623 AQRO60306 1485 aaKnown RBP eCLIP21.81■■□□□ 1.08
FAM3D-202ENST00000482623 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
FAM3D-202ENST00000482623 WDR97A6NE52 1622 aa21.74■■□□□ 1.07
FAM3D-202ENST00000482623 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
FAM3D-202ENST00000482623 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
FAM3D-202ENST00000482623 TDRD9Q8NDG6 1382 aaKnown RBP21.71■■□□□ 1.07
FAM3D-202ENST00000482623 FGD5Q6ZNL6 1462 aa21.7■■□□□ 1.06
FAM3D-202ENST00000482623 CUX1P39880 1505 aa21.67■■□□□ 1.06
FAM3D-202ENST00000482623 FBLN2P98095 1184 aa21.66■■□□□ 1.06
FAM3D-202ENST00000482623 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
FAM3D-202ENST00000482623 RIMBP3CA6NJZ7 1639 aa21.63■■□□□ 1.05
FAM3D-202ENST00000482623 RIMBP3BA6NNM3 1639 aa21.63■■□□□ 1.05
FAM3D-202ENST00000482623 RIMBP3Q9UFD9 1639 aa21.63■■□□□ 1.05
FAM3D-202ENST00000482623 CHMP7Q8WUX9 453 aaPredicted RBP21.62■■□□□ 1.05
FAM3D-202ENST00000482623 GRIN2BQ13224 1484 aa21.62■■□□□ 1.05
FAM3D-202ENST00000482623 MAGI1Q96QZ7 1491 aaPredicted RBP21.62■■□□□ 1.05
FAM3D-202ENST00000482623 CYB5RLQ6IPT4 315 aa21.56■■□□□ 1.04
FAM3D-202ENST00000482623 SNAPC4Q5SXM2 1469 aa21.55■■□□□ 1.04
FAM3D-202ENST00000482623 ABCA10Q8WWZ4 1543 aa21.55■■□□□ 1.04
FAM3D-202ENST00000482623 SYNJ2O15056 1496 aa21.52■■□□□ 1.04
FAM3D-202ENST00000482623 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.04
FAM3D-202ENST00000482623 CHD1O14646 1710 aa21.52■■□□□ 1.04
FAM3D-202ENST00000482623 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
FAM3D-202ENST00000482623 SYNJ1O43426 1573 aa21.46■■□□□ 1.03
FAM3D-202ENST00000482623 CLASP1Q7Z460 1538 aa21.44■■□□□ 1.02
FAM3D-202ENST00000482623 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
FAM3D-202ENST00000482623 TOP2BQ02880 1626 aa21.39■■□□□ 1.01
FAM3D-202ENST00000482623 ABCA5Q8WWZ7 1642 aa21.39■■□□□ 1.01
FAM3D-202ENST00000482623 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
FAM3D-202ENST00000482623 PBRM1Q86U86 1689 aa21.31■■□□□ 1
FAM3D-202ENST00000482623 FHAD1B1AJZ9 1412 aa21.3■■□□□ 1
FAM3D-202ENST00000482623 GRIN2AQ12879 1464 aa21.28■■□□□ 1
FAM3D-202ENST00000482623 ERICH3Q5RHP9 1530 aa21.28■■□□□ 1
FAM3D-202ENST00000482623 NUP160Q12769 1436 aa21.27■■□□□ 1
FAM3D-202ENST00000482623 TRHP20396 242 aaPredicted RBP21.26■□□□□ 0.99
FAM3D-202ENST00000482623 ADAMTS12P58397 1594 aa21.2■□□□□ 0.98
FAM3D-202ENST00000482623 JPH4Q96JJ6 628 aa21.12■□□□□ 0.97
FAM3D-202ENST00000482623 CEP170Q5SW79 1584 aa21.11■□□□□ 0.97
FAM3D-202ENST00000482623 IGF1RP08069 1367 aa21.08■□□□□ 0.96
FAM3D-202ENST00000482623 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
FAM3D-202ENST00000482623 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
FAM3D-202ENST00000482623 PRG4Q92954 1404 aaPredicted RBP21.03■□□□□ 0.96
FAM3D-202ENST00000482623 ERCC6L2Q5T890 1561 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms